Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for snai3

Gene Name Gene ID Reads Annotation
snai3 ENSDARG00000031243 31 snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]










Genes with expression patterns similar to snai3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snai3 ENSDARG00000031243 31 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
2. CABZ01086354.1 CABZ01086354.1 22 2.722 - 1.000 - - - 1.000 - - 0.722
3. ARSI_1 ARSI_1 38 2.51 - 0.921 - 0.700 - 0.889 - - -
4. si:dkey-238m4.1 si:dkey-238m4.1 71 2.293 0.829 0.725 - - - 0.739 - - -
5. svopb ENSDARG00000014951 1 2 - 1.000 - - - 1.000 - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
6. ENSDARG00000096199 ENSDARG00000096199 15 2 - 1.000 - - - 1.000 - - -
7. si:dkey-58f10.10 ENSDARG00000094284 4 1.998 - 1.000 - - - - - - 0.998 si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
8. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1.952 0.952 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
9. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1.952 0.952 - - - - 1.000 - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
10. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.913 - 0.913 - - - 1.000 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
11. C25H11orf74 C25H11orf74 161 1.902 0.924 0.978 - - - - - - -
12. cldn15lb ENSDARG00000100844 46 1.877 0.924 - - - - 0.953 - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
13. fzd9a ENSDARG00000035185 58 1.874 0.895 0.979 - - - - - - - frizzled class receptor 9a [Source:ZFIN;Acc:ZDB-GENE-060531-77]
14. Metazoa_SRP_25 Metazoa_SRP_25 13 1.873 - 1.000 - - - 0.873 - - -
15. RAB38 122 1.847 - 0.847 - - - 1.000 - - - RAB38, member RAS oncogene family
16. brwd3 ENSDARG00000035540 92 1.841 - 0.841 - - - 1.000 - - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
17. GPC5 GPC5 11 1.826 - 1.000 - - - - - - 0.826
18. ldhbb ENSDARG00000071076 31 1.803 - 0.803 - - - 1.000 - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
19. ptk2ba ENSDARG00000022841 19 1.797 0.924 - - - - 0.873 - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
20. ECT2L 39 1.797 0.924 - - - - 0.873 - - - epithelial cell transforming 2 like, transcript variant X4
21. mfsd12b 8 1.792 - 0.917 - - - - - - 0.875 major facilitator superfamily domain containing 12b
22. zte25 zte25 29 1.787 - 0.914 - - - 0.873 - - -
23. CABZ01022575.2 CABZ01022575.2 83 1.783 0.952 - - - - 0.831 - - -
24. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.744 - 1.000 - - - 0.744 - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
25. neto1l ENSDARG00000071596 57 1.738 0.821 0.917 - - - - - - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
26. brf2 ENSDARG00000002060 81 1.731 - 1.000 - - - - - 0.731 - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
27. si:ch211-218d20.10 si:ch211-218d20.10 4 1.726 0.924 - 0.802 - - - - - -
28. si:dkey-265e15.5 ENSDARG00000103229 6 1.725 0.952 - 0.773 - - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
29. ZNFX1 ENSDARG00000100280 118 1.712 - 0.712 - - - 1.000 - - - zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
30. grm7p grm7p 225 1.706 0.766 0.940 - - - - - - -
31. CHST8 23 1.697 - - 0.790 - - - - 0.907 - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8, transcript variant X1
32. samsn1a ENSDARG00000054543 28 1.697 - - 0.745 - - 0.952 - - - SAM domain, SH3 domain and nuclear localisation signals 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8639]
33. mmrn2a ENSDARG00000076135 37 1.688 0.924 0.764 - - - - - - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
34. si:ch211-122l24.4_1 si:ch211-122l24.4_1 53 1.685 - 0.703 - - - 0.982 - - -
35. cygb2 ENSDARG00000070148, ENSDARG00000109892, ENSDARG00000114471 30 1.683 0.924 - - - - - - 0.759 - cytoglobin 2 [Source:ZFIN;Acc:ZDB-GENE-060920-1]
36. si:dkey-151m22.9 si:dkey-151m22.9 6 1.665 0.924 - - - - - - 0.741 -
37. pif1 ENSDARG00000020289 216 1.659 0.952 - - - - 0.707 - - - PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
38. pls1 ENSDARG00000039272 39 1.648 - 0.917 - - - 0.731 - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
39. zgc:193807 ENSDARG00000076652, ENSDARG00000105440 34 1.644 0.924 - 0.720 - - - - - - zgc:193807 [Source:ZFIN;Acc:ZDB-GENE-081022-42]
40. si:dkey-24i24.3 ENSDARG00000088452 27 1.642 0.924 - - - - - - - 0.718 si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
41. napgl napgl 39 1.64 - - 0.831 - - - - - 0.809
42. lzts2b ENSDARG00000077207 22 1.619 - - - - - - - 0.826 0.793 leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
43. dennd2c ENSDARG00000073738 161 1.618 0.877 0.741 - - - - - - - DENN/MADD domain containing 2C [Source:ZFIN;Acc:ZDB-GENE-081105-71]
44. CABZ01088930.1 CABZ01088930.1 20 1.593 - 0.703 - - - - - 0.890 -
45. SNORD14 SNORD14 31 1.588 - 0.746 - - - 0.842 - - -
46. dcaf5 ENSDARG00000060320 163 1.58 - 0.722 - - - 0.858 - - - ddb1 and cul4 associated factor 5 [Source:ZFIN;Acc:ZDB-GENE-060929-808]
47. ibtk ENSDARG00000074424 146 1.577 - 0.735 - - - 0.842 - - - inhibitor of Bruton agammaglobulinemia tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6246]
48. ZNF135 ZNF135 14 1.555 - - 0.794 - - - - 0.761 -
49. CDH16 ENSDARG00000077570 78 1.521 - 0.707 - - - 0.814 - - - cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]
50. BX119916.1 BX119916.1 19 1.484 - - - - - 0.775 - - 0.709
51. kcnd1 ENSDARG00000074746 153 1.469 0.732 - - 0.737 - - - - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
52. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
53. rbck1 ENSDARG00000031954 95 1 - - - - - 1.000 - - - RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]
54. pglyrp2 ENSDARG00000062998 11 1 - - - - - 1.000 - - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
55. VMO1 VMO1 11 1 - - - - - 1.000 - - -
56. si:ch211-235f12.2 ENSDARG00000092119 31 1 - 1.000 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
57. U6_28 U6_28 1 1 - - - - - 1.000 - - -
58. dock11 ENSDARG00000062485 17 1 - - - - - 1.000 - - - dedicator of cytokinesis 11 [Source:ZFIN;Acc:ZDB-GENE-060503-196]
59. zgc:173837 ENSDARG00000076949 24 1 - - - - - 1.000 - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
60. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
61. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - 1.000 - - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
62. ppid_1 ENSDARG00000038835 4 1 - - - - - 1.000 - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
63. C5H9orf9 C5H9orf9 6 1 - - - - - 1.000 - - -
64. dnase1l3l dnase1l3l 16 1 - - - - - 1.000 - - -
65. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
66. rfxank ENSDARG00000016730 12 1 - - - - - 1.000 - - - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
67. or132-2 ENSDARG00000094515, ENSDARG00000105762 1 1 - - - - - - - 1.000 - odorant receptor, family H, subfamily 132, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-48]
68. EXD1 ENSDARG00000098669 27 1 - - - - - 1.000 - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
69. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
70. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
71. si:dkey-247i3.1 ENSDARG00000076252 11 1 - - - - - - - 1.000 - si:dkey-247i3.1 [Source:ZFIN;Acc:ZDB-GENE-110913-84]
72. CR318593.1_1 CR318593.1_1 8 1 - - - - - 1.000 - - -
73. NUMA1_3 NUMA1_3 5 1 - - - - - - - 1.000 -
74. zgc:162971 ENSDARG00000101093 1 1 - - - - - - - 1.000 - zgc:162971 [Source:ZFIN;Acc:ZDB-GENE-070424-48]
75. mctp1b ENSDARG00000060871 20 1 - 1.000 - - - - - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
76. mipol1 ENSDARG00000104845 6 1 - 1.000 - - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
77. mfsd6l ENSDARG00000014761 60 1 - - - - - 1.000 - - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
78. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
79. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
80. CU929356.4 CU929356.4 86 1 - - - - - 1.000 - - -
81. stk35_1 ENSDARG00000086856 3 1 - - - - - 1.000 - - - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
82. BX537350.1 BX537350.1 8 1 - - - - - 1.000 - - -
83. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
84. pcdh1g2 ENSDARG00000101232 5 1 - - - - - - - 1.000 - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
85. 5S_rRNA_15 5S_rRNA_15 9 1 - 1.000 - - - - - - -
86. CABZ01063789.1 CABZ01063789.1 1 1 - - - - - 1.000 - - -
87. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
88. Mar-11 Mar-11 5 1 - - - - - - - 1.000 -
89. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
90. si:ch211-101n13.1 si:ch211-101n13.1 68 1 - 1.000 - - - - - - -
91. cyp46a4 cyp46a4 5 1 - - - - - 1.000 - - -
92. PROC PROC 11 1 - - - - - 1.000 - - -
93. FGD5_1 FGD5_1 8 1 - - - - - 1.000 - - -
94. drc1 ENSDARG00000042182 39 1 - - - - - 1.000 - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
95. illr3 ENSDARG00000018327 5 1 - - - - - 1.000 - - - immune-related, lectin-like receptor 3 [Source:ZFIN;Acc:ZDB-GENE-050311-4]
96. KLHDC3 ENSDARG00000102772 14 1 - 1.000 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
97. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - 1.000 - - - - - - -
98. CABZ01048349.1 CABZ01048349.1 1 1 - - - - - - - 1.000 -
99. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
100. rtn4rl1b ENSDARG00000098528 31 1 - - - - - 1.000 - - - reticulon 4 receptor-like 1b [Source:ZFIN;Acc:ZDB-GENE-040310-3]

There are 1049 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA