Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snai1b

Gene Name Gene ID Reads Annotation
snai1b ENSDARG00000046019 886 snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]










Genes with expression patterns similar to snai1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snai1b ENSDARG00000046019 886 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
2. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 2.548 - 0.754 0.957 - - 0.837 - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
3. rybpb ENSDARG00000053459 1464 2.492 - 0.720 0.971 0.801 - - - - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
4. daxx ENSDARG00000000729 734 2.233 0.752 - - - - 0.714 0.767 - - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
5. phf3 ENSDARG00000034768 1372 1.833 - - 0.963 - - 0.870 - - - PHD finger protein 3 [Source:ZFIN;Acc:ZDB-GENE-090313-207]
6. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.809 - - 0.976 - - - - 0.833 - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
7. TUBGCP6 1991 1.779 - 0.800 0.979 - - - - - - tubulin, gamma complex associated protein 6
8. wnk1b ENSDARG00000039392 3587 1.766 - 0.799 0.967 - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
9. dnajc5ab ENSDARG00000004836 2923 1.755 - - 0.972 - - - 0.783 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
10. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.754 - 0.824 0.930 - - - - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
11. cars ENSDARG00000036164 2019 1.741 - 0.800 0.941 - - - - - - cysteinyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030328-29]
12. cactin ENSDARG00000059866 553 1.738 - - 0.984 0.754 - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
13. gadd45gip1 ENSDARG00000039338 1878 1.734 - 0.763 0.971 - - - - - - growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
14. ppie ENSDARG00000103234, ENSDARG00000111596 511 1.726 - - 0.985 0.741 - - - - - peptidylprolyl isomerase E (cyclophilin E) [Source:ZFIN;Acc:ZDB-GENE-050417-167]
15. GIGYF1_1 GIGYF1_1 1865 1.725 - - 0.962 - - 0.763 - - -
16. dhx34 ENSDARG00000061168 349 1.722 - - 0.984 0.738 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
17. flad1 ENSDARG00000070390 604 1.71 - - 0.983 - - - - 0.727 - flavin adenine dinucleotide synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-44]
18. chst13 chst13 669 1.708 - - 0.962 - - 0.746 - - -
19. st5 ENSDARG00000037363, ENSDARG00000112276 1797 1.707 - 0.734 0.973 - - - - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
20. adnp2b ENSDARG00000028431 4683 1.707 - 0.727 0.980 - - - - - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
21. ccdc124 ENSDARG00000043502 2420 1.698 - 0.724 0.974 - - - - - - coiled-coil domain containing 124 [Source:ZFIN;Acc:ZDB-GENE-040426-1483]
22. phf10 ENSDARG00000070084 1210 1.691 - - 0.975 - - 0.716 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
23. zgc:110329 ENSDARG00000035532, ENSDARG00000110423 2229 1.691 - - 0.982 - - 0.709 - - - zgc:110329 [Source:ZFIN;Acc:ZDB-GENE-050417-334]
24. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.688 - 0.718 0.970 - - - - - - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
25. twf1a ENSDARG00000115712 3465 1.684 - - 0.974 0.710 - - - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
26. PCBP4 ENSDARG00000024276 3194 1.683 - 0.711 0.972 - - - - - - poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
27. MSL1_1 MSL1_1 2365 1.678 - - 0.950 - - 0.728 - - -
28. ek1 ENSDARG00000020080 742 1.676 - - 0.968 - - 0.708 - - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
29. lmo2 ENSDARG00000095019 1098 1.658 0.748 - - - - - - 0.910 - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
30. fat1 fat1 3934 1.65 - 0.749 0.901 - - - - - -
31. calhm2 ENSDARG00000039482 138 1.628 - - - 0.756 - 0.872 - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
32. dut ENSDARG00000106529 3120 1.625 - 0.728 0.897 - - - - - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
33. eif3m ENSDARG00000013931 8117 1.619 - 0.768 0.851 - - - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
34. uso1 ENSDARG00000019581 479 1.618 - - - 0.779 - 0.839 - - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
35. pou3f3a ENSDARG00000042032 2835 1.616 - 0.720 0.896 - - - - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
36. sdc4 ENSDARG00000059906 10105 1.611 - 0.753 0.858 - - - - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
37. TACC2 1702 1.59 0.738 0.852 - - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
38. zgc:66433 ENSDARG00000071697 688 1.571 0.804 0.767 - - - - - - - zgc:66433 [Source:ZFIN;Acc:ZDB-GENE-030131-9832]
39. slc44a5b ENSDARG00000057419 534 1.565 - - - - - 0.840 - 0.725 - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
40. cdkal1 ENSDARG00000104848 2102 1.565 - 0.759 - - - - - 0.806 - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
41. homer3 homer3 1974 1.557 - 0.730 - - - 0.827 - - -
42. si:ch211-212k5.2 si:ch211-212k5.2 152 1.554 0.820 - - 0.734 - - - - -
43. pdgfab ENSDARG00000098578, ENSDARG00000109732 718 1.549 - 0.718 - - - 0.831 - - - platelet-derived growth factor alpha polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060929-124]
44. pus7 ENSDARG00000031774 195 1.545 0.771 - - - - - - 0.774 - pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
45. cstf2_1 ENSDARG00000090788 709 1.541 - 0.783 - 0.758 - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]
46. stk40 ENSDARG00000098135 2683 1.537 - - - 0.786 - - - 0.751 - serine/threonine kinase 40 [Source:ZFIN;Acc:ZDB-GENE-030131-4831]
47. shroom1 ENSDARG00000094181 2325 1.535 - 0.800 - - - - - 0.735 - shroom family member 1 [Source:ZFIN;Acc:ZDB-GENE-091204-385]
48. TMEM185A TMEM185A 5505 1.531 - 0.713 - - - 0.818 - - -
49. abhd14a ENSDARG00000058367 546 1.526 - 0.742 - - - 0.784 - - - abhydrolase domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-040426-2428]
50. BX088524.2 ENSDARG00000103268 564 1.519 - 0.753 - - - 0.766 - - -
51. myclb ENSDARG00000034956, ENSDARG00000110185 1466 1.518 - 0.788 - 0.730 - - - - - MYCL proto-oncogene, bHLH transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-5561]
52. bach2b ENSDARG00000004074 1079 1.515 - 0.724 - - - 0.791 - - - BTB and CNC homology 1, basic leucine zipper transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-041001-139]
53. foxp1a ENSDARG00000004843 3961 1.513 0.705 0.808 - - - - - - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
54. vwde ENSDARG00000103443 5758 1.509 0.760 0.749 - - - - - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
55. MRPL21 ENSDARG00000003846 3244 1.507 0.705 0.802 - - - - - - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
56. BX511021.1 ENSDARG00000073936 647 1.505 - 0.745 - - - - - 0.760 - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
57. si:ch211-223f7.1 si:ch211-223f7.1 38 1.501 0.712 - - - - 0.789 - - -
58. cplx4b ENSDARG00000059486 3192 1.499 - 0.736 - 0.763 - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
59. afg3l2 ENSDARG00000062272 864 1.498 - 0.741 - - - 0.757 - - - AFG3-like AAA ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-070912-46]
60. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.497 - - - 0.743 - 0.754 - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
61. C22H10orf76 C22H10orf76 1103 1.497 - 0.730 - - - 0.767 - - -
62. gtpbp10 ENSDARG00000040300 533 1.495 - - - 0.709 - 0.786 - - - GTP-binding protein 10 (putative) [Source:ZFIN;Acc:ZDB-GENE-040718-153]
63. PCDH12 ENSDARG00000076594 381 1.492 0.765 0.727 - - - - - - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
64. slc16a9b ENSDARG00000104687 826 1.489 - 0.734 - - - 0.755 - - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
65. pa2g4b ENSDARG00000070657 7999 1.487 - 0.728 - - - - - 0.759 - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
66. nfybb ENSDARG00000045611, ENSDARG00000110926 350 1.487 - - - - - 0.714 0.773 - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
67. cdh5 ENSDARG00000075549 2288 1.486 0.762 - - - - - - 0.724 - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
68. dnph1 ENSDARG00000075730 403 1.486 - - - 0.763 - - 0.723 - - 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-5]
69. si:dkey-100h21.2 si:dkey-100h21.2 30 1.486 0.712 - - - - - - 0.774 -
70. wdr43 ENSDARG00000077264 1992 1.484 0.718 - - - - 0.766 - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
71. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.483 0.755 0.728 - - - - - - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
72. Mar-05 Mar-05 2391 1.482 - 0.723 - - - 0.759 - - -
73. setx ENSDARG00000022996 385 1.481 - - - 0.738 - - - 0.743 - senataxin [Source:ZFIN;Acc:ZDB-GENE-070402-1]
74. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.48 - - - - - 0.750 0.730 - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
75. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.48 0.719 0.761 - - - - - - - zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
76. CU013533.1 CU013533.1 108 1.479 0.712 - - - - 0.767 - - -
77. usb1 ENSDARG00000003841 524 1.478 - - - 0.701 - 0.777 - - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
78. slc7a3a ENSDARG00000020645 1458 1.478 - - - 0.753 - 0.725 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 3a [Source:ZFIN;Acc:ZDB-GENE-041114-206]
79. pno1 ENSDARG00000008502 4547 1.477 - 0.756 - - - - - 0.721 - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
80. ube2nb ENSDARG00000045877 4583 1.474 - 0.763 - - - 0.711 - - - ubiquitin-conjugating enzyme E2Nb [Source:ZFIN;Acc:ZDB-GENE-040426-1291]
81. mea1 ENSDARG00000039820 589 1.474 - - - - - - 0.704 0.770 - male-enhanced antigen 1 [Source:ZFIN;Acc:ZDB-GENE-070424-117]
82. lmx1ba ENSDARG00000104815 376 1.469 - 0.702 - - - 0.767 - - - LIM homeobox transcription factor 1, beta a [Source:ZFIN;Acc:ZDB-GENE-050114-3]
83. clec14a ENSDARG00000103533 718 1.467 0.731 0.736 - - - - - - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
84. csde1_1 ENSDARG00000074758 2759 1.466 - - - 0.701 - - 0.765 - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
85. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.466 - 0.703 - - - - - 0.763 - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
86. lama4 ENSDARG00000020785 1522 1.464 - 0.760 - - - - - 0.704 - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
87. slc17a7 slc17a7 129 1.463 - - - - - 0.722 - 0.741 -
88. ablim3 ENSDARG00000088168, ENSDARG00000112071, ENSDARG00000114074 573 1.463 - 0.740 - - - 0.723 - - - actin binding LIM protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1122]
89. CABZ01084569.1 CABZ01084569.1 650 1.462 - 0.743 - - - 0.719 - - -
90. dctn5 ENSDARG00000003573 1100 1.46 - - - - - 0.718 0.742 - - dynactin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-201]
91. auh ENSDARG00000042975 1841 1.458 - 0.732 - - - 0.726 - - - AU RNA binding protein/enoyl-CoA hydratase [Source:ZFIN;Acc:ZDB-GENE-040801-95]
92. ptpn9b ENSDARG00000073902 755 1.454 - 0.752 - - - 0.702 - - - protein tyrosine phosphatase, non-receptor type 9, b [Source:ZFIN;Acc:ZDB-GENE-090313-52]
93. nrbf2 nrbf2 604 1.452 - - - - - 0.725 - 0.727 -
94. dnm3 dnm3 45 1.447 0.712 - - - - 0.735 - - -
95. TNRC18 ENSDARG00000077052 1095 1.446 - 0.727 - - - 0.719 - - - trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
96. LMLN ENSDARG00000061265 1618 1.444 - 0.702 - - - 0.742 - - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
97. si:dkey-14k9.3 ENSDARG00000045595 256 1.429 - - - 0.716 - - - 0.713 - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
98. ntmt1 ENSDARG00000022399 5779 1.419 - 0.701 0.718 - - - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
99. slc25a23a ENSDARG00000005690 824 1.417 - 0.703 - - - - - 0.714 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
100. si:ch211-220f16.2 ENSDARG00000007976 638 1.416 - 0.706 - - - 0.710 - - - si:ch211-220f16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-199]

There are 1947 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA