Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snai1a

Gene Name Gene ID Reads Annotation
snai1a ENSDARG00000056995 1427 snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]










Genes with expression patterns similar to snai1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snai1a ENSDARG00000056995 1427 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
2. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 2.435 - 0.741 - 0.739 - - - 0.955 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
3. si:ch211-202f5.3 ENSDARG00000092998 1388 2.313 0.794 0.790 - - - - 0.729 - - si:ch211-202f5.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1042]
4. optn ENSDARG00000002663, ENSDARG00000111364 1440 1.838 - 0.894 - - - - - 0.944 - optineurin [Source:ZFIN;Acc:ZDB-GENE-030131-8103]
5. ppp1r7 ENSDARG00000009740 2606 1.828 - 0.925 - - - - - 0.903 - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
6. phf10 ENSDARG00000070084 1210 1.828 - - - 0.852 - - - 0.976 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
7. siah1 ENSDARG00000030871 1590 1.782 - 0.833 - - - - - 0.949 - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
8. unc119b ENSDARG00000044362 1528 1.774 - - - 0.837 - - - 0.937 - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
9. CYTH2 ENSDARG00000028800 2349 1.763 - 0.831 - - - - - 0.932 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
10. cadm1a ENSDARG00000031075 2484 1.756 - - - 0.847 - - - 0.909 - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
11. nelfe ENSDARG00000004343 1647 1.741 - - - - - - 0.799 0.942 - negative elongation factor complex member E [Source:ZFIN;Acc:ZDB-GENE-040718-69]
12. bcl7ba ENSDARG00000111877 3696 1.736 - 0.927 - - - - 0.809 - - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
13. rab23 ENSDARG00000004151 1077 1.736 - - - 0.763 - - - 0.973 - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
14. nat15 ENSDARG00000061185 396 1.736 - 0.869 - 0.867 - - - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
15. rdh14b ENSDARG00000002467 991 1.735 - - - 0.765 - - - 0.970 - retinol dehydrogenase 14b [Source:ZFIN;Acc:ZDB-GENE-030131-6605]
16. tmem30ab ENSDARG00000043555 1344 1.727 - - - 0.841 - - - 0.886 - transmembrane protein 30Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5884]
17. tdrd3 ENSDARG00000025421 633 1.72 - 0.855 - 0.865 - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
18. ppig ENSDARG00000044431 3427 1.716 - - - 0.843 - - - 0.873 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
19. zdhhc6 ENSDARG00000075721 1494 1.695 - 0.864 - 0.831 - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
20. eif4h ENSDARG00000042252 6742 1.68 - - - 0.729 - - - 0.951 - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
21. sppl2 ENSDARG00000030448 1040 1.673 - 0.772 - - - - - 0.901 - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
22. stk35l ENSDARG00000057497 3582 1.67 - 0.710 - - - - - 0.960 - serine/threonine kinase 35, like [Source:ZFIN;Acc:ZDB-GENE-041212-52]
23. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.669 - 0.840 - 0.829 - - - - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
24. bbs4 ENSDARG00000063522 247 1.669 - 0.862 - 0.807 - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
25. epb41l4a ENSDARG00000040087 1013 1.669 - 0.872 - 0.797 - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
26. vrk1 ENSDARG00000018006 1759 1.665 - - - 0.759 - - - 0.906 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
27. rac3b ENSDARG00000020795 1523 1.649 - 0.855 - 0.794 - - - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
28. PARD3B PARD3B 401 1.648 - 0.789 - 0.859 - - - - -
29. golga7 ENSDARG00000057676 4691 1.648 - - - 0.785 - - - 0.863 - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
30. PARP12 PARP12 77 1.643 - - - 0.848 - - 0.795 - -
31. cxxc1 cxxc1 914 1.638 - 0.812 - 0.826 - - - - -
32. gpm6bb ENSDARG00000001676 2005 1.638 - - - 0.803 - - - 0.835 - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
33. trappc2 ENSDARG00000097660 760 1.63 - - - 0.851 - - 0.779 - - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
34. sema5a ENSDARG00000058821 333 1.63 - 0.881 - - - - 0.749 - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
35. znf710a ENSDARG00000014680 582 1.629 - 0.770 - 0.859 - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
36. FAM114A2 ENSDARG00000079508 1226 1.62 - - - 0.712 - - - 0.908 - family with sequence similarity 114, member A2 [Source:ZFIN;Acc:ZDB-GENE-030131-6308]
37. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 1.617 - 0.768 - 0.849 - - - - -
38. si:ch73-387e10.3 si:ch73-387e10.3 517 1.614 - - - 0.847 - - 0.767 - -
39. schip1 ENSDARG00000035175 3838 1.613 - - - - - - 0.721 0.892 - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
40. crcp ENSDARG00000069373 730 1.609 - 0.860 - - - - 0.749 - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
41. crp4 714 1.606 0.767 - - 0.839 - - - - - C-reactive protein 4
42. lrig1 ENSDARG00000075625 2027 1.606 - 0.745 - - - - - 0.861 - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
43. DIP2C DIP2C 222 1.602 - - - 0.865 - - 0.737 - -
44. GPR180 73 1.59 - - - 0.859 - - - - 0.731 G protein-coupled receptor 180, transcript variant X2
45. ldb1a ENSDARG00000010137 3035 1.587 - 0.886 - 0.701 - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
46. GRK6 ENSDARG00000032157 1136 1.578 0.732 0.846 - - - - - - - G protein-coupled receptor kinase 6 [Source:ZFIN;Acc:ZDB-GENE-101006-5]
47. hdac6 ENSDARG00000008384 144 1.577 0.719 0.858 - - - - - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
48. ctdspla ENSDARG00000071673 1447 1.572 - 0.848 - 0.724 - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
49. pip5k1aa ENSDARG00000100396 1644 1.57 - 0.827 - 0.743 - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
50. gb:bc139653 gb:bc139653 239 1.566 - 0.811 - - - - 0.755 - -
51. reep5 ENSDARG00000100742 1470 1.563 - 0.795 - - - - 0.768 - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
52. si:dkey-56e3.3 ENSDARG00000075194 491 1.562 - - - 0.720 - - 0.842 - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
53. mgll ENSDARG00000036820 747 1.559 - 0.718 - 0.841 - - - - - monoglyceride lipase [Source:ZFIN;Acc:ZDB-GENE-031006-9]
54. si:ch211-218g4.2 ENSDARG00000078145 778 1.553 0.758 0.795 - - - - - - - si:ch211-218g4.2 [Source:ZFIN;Acc:ZDB-GENE-090312-60]
55. lrrfip2 ENSDARG00000010400 2633 1.552 - 0.751 - 0.801 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
56. zdhhc17 ENSDARG00000070441 1073 1.545 - 0.720 - 0.825 - - - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
57. wbscr16 wbscr16 791 1.543 - 0.794 - - - - 0.749 - -
58. txnl1 ENSDARG00000011921 692 1.538 - - - 0.826 - - 0.712 - - thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
59. exoc2 ENSDARG00000055610, ENSDARG00000109455 950 1.537 - 0.744 - - - - - 0.793 - exocyst complex component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1160]
60. dmbx1b ENSDARG00000002510 351 1.536 - - - 0.738 - - 0.798 - - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
61. TMEM185A TMEM185A 5505 1.536 0.778 - - 0.758 - - - - -
62. atp6v0b ENSDARG00000031681 4611 1.532 - - - - - - 0.730 0.802 - ATPase H+ transporting V0 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-443]
63. CR548630.1 CR548630.1 3301 1.532 - 0.751 - 0.781 - - - - -
64. oxsr1a ENSDARG00000034189 4314 1.528 - 0.711 - - - - - 0.817 - oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
65. fermt1 ENSDARG00000052652 2394 1.523 - 0.775 - - - - - - 0.748 fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
66. CABZ01073424.1 ENSDARG00000107858 688 1.518 - 0.810 - 0.708 - - - - -
67. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.516 - 0.704 - - - - - 0.812 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
68. usp1 ENSDARG00000056414 1816 1.515 - 0.806 - 0.709 - - - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
69. zzz3 ENSDARG00000077581 1343 1.513 - 0.775 - 0.738 - - - - - zinc finger, ZZ-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6450]
70. WAPAL WAPAL 1888 1.507 - 0.743 - 0.764 - - - - -
71. pbdc1 ENSDARG00000057299, ENSDARG00000111256, ENSDARG00000112544 5960 1.506 - 0.710 - - - - - 0.796 - polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]
72. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.49 0.711 - - 0.779 - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
73. nfkbiab ENSDARG00000007693 1345 1.485 - - - 0.750 - - 0.735 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
74. insrb ENSDARG00000071524 1820 1.482 - 0.755 - 0.727 - - - - - insulin receptor b [Source:ZFIN;Acc:ZDB-GENE-020503-4]
75. bccip ENSDARG00000004948 593 1.463 - 0.726 - - - - 0.737 - - BRCA2 and CDKN1A interacting protein [Source:ZFIN;Acc:ZDB-GENE-050320-39]
76. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 1.458 - - - 0.749 - - - - 0.709 trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
77. CASKIN2_1 CASKIN2_1 2299 0.985 - - - - - - - 0.985 -
78. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.985 - - - - - - - 0.985 - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
79. cbll1 ENSDARG00000015222 995 0.984 - - - - - - - 0.984 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
80. abcb6b ENSDARG00000074254 600 0.984 - - - - - - - 0.984 - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
81. cks2 ENSDARG00000071410, ENSDARG00000116198 966 0.983 - - - - - - - 0.983 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
82. mllt3 ENSDARG00000006754 985 0.983 - - - - - - - 0.983 - MLLT3, super elongation complex subunit [Source:ZFIN;Acc:ZDB-GENE-050417-356]
83. onecutl ENSDARG00000040253 2143 0.983 - - - - - - - 0.983 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
84. CABZ01069006.1 CABZ01069006.1 363 0.982 - - - - - - - 0.982 -
85. tmem88b ENSDARG00000069388 501 0.982 - - - - - - - 0.982 - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
86. atn1 ENSDARG00000092067 257 0.982 - - - - - - - 0.982 - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
87. ZNF70_2 ZNF70_2 1866 0.982 - - - - - - - 0.982 -
88. wu:fj13e08 1223 0.982 - - - - - - - 0.982 - wu:fj13e08
89. phc1 ENSDARG00000002971 924 0.982 - - - - - - - 0.982 - polyhomeotic homolog 1 [Source:ZFIN;Acc:ZDB-GENE-081022-39]
90. SPAG9 ENSDARG00000078142 629 0.982 - - - - - - - 0.982 - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
91. snrnp40 ENSDARG00000023160 1108 0.981 - - - - - - - 0.981 - small nuclear ribonucleoprotein 40 (U5) [Source:ZFIN;Acc:ZDB-GENE-040426-978]
92. ankrd37 ENSDARG00000056376 131 0.981 - - - - - - - 0.981 - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
93. sult4a1 ENSDARG00000101967 205 0.981 - - - - - - - 0.981 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
94. kif7 ENSDARG00000033099 971 0.98 - - - - - - - 0.980 - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
95. GATC ENSDARG00000056855 551 0.98 - - - - - - - 0.980 - glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
96. C20H1orf198 C20H1orf198 246 0.98 - - - - - - - 0.980 -
97. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.98 - - - - - - - 0.980 - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
98. itga11a ENSDARG00000036086, ENSDARG00000111495 254 0.98 - - - - - - - 0.980 - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
99. mul1b ENSDARG00000052527 431 0.98 - - - - - - - 0.980 - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
100. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.98 - - - - - - - 0.980 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]

There are 1528 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA