Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for snR50

Gene Name Gene ID Reads Annotation
snR50 snR50 1










Genes with expression patterns similar to snR50

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. snR50 snR50 1 3 - - - 1.000 - 1.000 - - 1.000
2. ccdc14 ENSDARG00000098734 3 1.811 - - - 0.811 - 1.000 - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
3. si:dkey-14o6.7 si:dkey-14o6.7 9 1.805 - - - 1.000 - - - - 0.805
4. XRCC2 ENSDARG00000013933 15 1.79 - - - 0.790 - - - - 1.000 X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
5. cdh10 cdh10 38 1.645 - - - 0.702 - 0.943 - - -
6. si:ch211-218m3.13 ENSDARG00000053779 0 1 - - - 1.000 - - - - - si:ch211-218m3.13 [Source:ZFIN;Acc:ZDB-GENE-091113-55]
7. FMNL1 FMNL1 7 1 - - - - - - - - 1.000
8. CR356223.1 ENSDARG00000093865 1 1 - - - - - 1.000 - - -
9. CABZ01084273.1 CABZ01084273.1 16 1 - - - - - 1.000 - - -
10. irf1b ENSDARG00000043249 30 1 - - - - - 1.000 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
11. URB1 ENSDARG00000060308 78 1 - - - - - 1.000 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
12. sts ENSDARG00000053241 10 1 - - - - - - - - 1.000 steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
13. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - 1.000 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
14. BICD1 BICD1 9 1 - - - - - 1.000 - - -
15. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
16. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - - - 1.000 - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
17. tirap ENSDARG00000074371 10 1 - - - - - - - - 1.000 toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
18. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - - - - 1.000
19. si:dkey-111b14.3 si:dkey-111b14.3 7 1 - - - 1.000 - - - - -
20. ZDHHC1 ENSDARG00000077546 14 1 - - - 1.000 - - - - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
21. v2rh11 ENSDARG00000115088 1 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
22. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
23. si:dkey-37m8.8 si:dkey-37m8.8 1 1 - - - 1.000 - - - - -
24. zgc:171731 ENSDARG00000014657, ENSDARG00000112592 5 1 - - - 1.000 - - - - - zgc:171731 [Source:ZFIN;Acc:ZDB-GENE-071004-27]
25. CABZ01074423.1 CABZ01074423.1 8 1 - - - 1.000 - - - - -
26. SBSPON ENSDARG00000110160 2 1 - - - - - - - - 1.000 somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
27. CT573468.1 CT573468.1 283 1 - - - - - - - - 1.000
28. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1 - - - - - - - - 1.000
29. olfcd2 ENSDARG00000098492 0 1 - - - 1.000 - - - - - olfactory receptor C family, d2 [Source:ZFIN;Acc:ZDB-GENE-050712-5]
30. kcnh3 ENSDARG00000069560 4 1 - - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
31. CR293498.1 ENSDARG00000097990 4 1 - - - - - - - - 1.000
32. agfg1a ENSDARG00000030020 6 1 - - - 1.000 - - - - - ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
33. mhc1uma ENSDARG00000039164 16 1 - - - 1.000 - - - - - major histocompatibility complex class I UMA [Source:ZFIN;Acc:ZDB-GENE-140820-1]
34. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - 1.000 - - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
35. si:ch1073-47b13.2 si:ch1073-47b13.2 3 1 - - - 1.000 - - - - -
36. SNORA68 SNORA68 1 1 - - - 1.000 - - - - -
37. sh2d4b sh2d4b 1 1 - - - - - - - - 1.000
38. naa40_1 ENSDARG00000024109, ENSDARG00000090570 1 1 - - - 1.000 - - - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
39. si:dkey-249p7.4 ENSDARG00000096663 9 1 - - - 1.000 - - - - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
40. foxi1 ENSDARG00000104566 176 1 - - - - - 1.000 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
41. rpap3 ENSDARG00000087962 22 1 - - - 1.000 - - - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
42. ftr58 ENSDARG00000071238 10 1 - - - - - 1.000 - - - finTRIM family, member 58 [Source:ZFIN;Acc:ZDB-GENE-080219-44]
43. U5_7 U5_7 0 1 - - - - - - - - 1.000
44. CU855899.1 CU855899.1 2 1 - - - - - - - - 1.000
45. veph veph 3 1 - - - 1.000 - - - - -
46. cox5aa ENSDARG00000088383 21 1 - - - - - - - - 1.000 cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
47. CU570689.1 ENSDARG00000096111 0 1 - - - 1.000 - - - - -
48. tmem167b ENSDARG00000059400 9 1 - - - - - - - - 1.000 transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
49. CABZ01002339.1 CABZ01002339.1 0 1 - - - 1.000 - - - - -
50. saa ENSDARG00000045999 0 1 - - - - - - - - 1.000 serum amyloid A [Source:ZFIN;Acc:ZDB-GENE-040927-15]
51. si:dkey-111e8.4 ENSDARG00000093547, ENSDARG00000115133 1 1 - - - 1.000 - - - - - si:dkey-111e8.4 [Source:ZFIN;Acc:ZDB-GENE-060526-191]
52. CABZ01111604.1 CABZ01111604.1 140 1 - - - 1.000 - - - - -
53. GCSH GCSH 0 1 - - - 1.000 - - - - -
54. fam166b ENSDARG00000100292 14 1 - - - - - 1.000 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
55. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - - 1.000 - - -
56. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
57. ccdc41 ccdc41 97 1 - - - - - 1.000 - - -
58. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - - 1.000 - - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
59. CU695006.2 CU695006.2 1 1 - - - 1.000 - - - - -
60. si:ch211-219a15.3 ENSDARG00000087659 12 1 - - - - - 1.000 - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
61. DIAPH2 ENSDARG00000076060 1 1 - - - - - - - - 1.000 diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
62. SNORD57 SNORD57 2 1 - - - 1.000 - - - - -
63. zgc:173619_1 2 1 - - - - - - - - 1.000 zgc:173619
64. CR936371.2 ENSDARG00000117302 2 1 - - - - - - - - 1.000
65. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - 1.000 - - -
66. fam19a1 7 1 - - - - - - - - 1.000 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
67. ppp4r1 ENSDARG00000101316 1 1 - - - - - - - - 1.000 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
68. si:dkey-222o15.5 si:dkey-222o15.5 27 1 - - - 1.000 - - - - -
69. mib mib 1 1 - - - - - - - - 1.000
70. cldn10l2 ENSDARG00000105042 11 1 - - - - - 1.000 - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
71. si:ch211-145h19.2 7 1 - - - - - - - - 1.000 si:ch211-145h19.2
72. ucmaa ENSDARG00000027799 2 1 - - - 1.000 - - - - - upper zone of growth plate and cartilage matrix associated a [Source:ZFIN;Acc:ZDB-GENE-070410-71]
73. POGK POGK 1 1 - - - - - 1.000 - - -
74. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 1 - - - - - - - - 1.000 noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
75. si:dkeyp-82a1.5 si:dkeyp-82a1.5 6 1 - - - - - - - - 1.000
76. prlhr2a ENSDARG00000044900 0 1 - - - 1.000 - - - - - prolactin releasing hormone receptor 2a [Source:ZFIN;Acc:ZDB-GENE-060209-1]
77. phc3 ENSDARG00000074604 2 1 - - - 1.000 - - - - - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
78. BX323793.3 BX323793.3 7 1 - - - - - 1.000 - - -
79. im:7151068 im:7151068 2 1 - - - 1.000 - - - - -
80. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
81. il17c ENSDARG00000057180, ENSDARG00000109701 3 1 - - - - - 1.000 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
82. olig1 ENSDARG00000040948 1 1 - - - 1.000 - - - - - oligodendrocyte transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050107-2]
83. itga2.1 ENSDARG00000069390 6 1 - - - - - 1.000 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
84. GMEB2 ENSDARG00000093240 6 1 - - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
85. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
86. CABZ01002768.1 ENSDARG00000098901 2 1 - - - - - - - - 1.000
87. si:ch73-103b2.3 si:ch73-103b2.3 0 1 - - - 1.000 - - - - -
88. BICD2_1 BICD2_1 18 1 - - - 1.000 - - - - -
89. CR631122.1 ENSDARG00000044534 8 1 - - - - - - - - 1.000 protein RD3-like [Source:NCBI gene;Acc:100149591]
90. C1QTNF6 C1QTNF6 2 1 - - - - - 1.000 - - -
91. WNK4 WNK4 0 1 - - - - - - - - 1.000
92. FNDC3A ENSDARG00000105503 11 1 - - - - - 1.000 - - - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
93. si:ch211-225p5.3 si:ch211-225p5.3 10 1 - - - 1.000 - - - - -
94. or115-12 ENSDARG00000044748 2 1 - - - - - 1.000 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
95. themis ENSDARG00000010619 5 1 - - - - - 1.000 - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
96. si:dkey-1b17.11 si:dkey-1b17.11 3 1 - - - 1.000 - - - - -
97. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - - - - - 1.000 si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
98. PDILT PDILT 6 1 - - - 1.000 - - - - -
99. ccdc170 ENSDARG00000016161 18 1 - - - - - - - - 1.000 coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
100. TACR3 TACR3 1 1 - - - - - - - - 1.000

There are 415 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA