Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smyhc3

Gene Name Gene ID Reads Annotation
smyhc3 ENSDARG00000114031, ENSDARG00000116413 3 slow myosin heavy chain 3 [Source:ZFIN;Acc:ZDB-GENE-080930-1]










Genes with expression patterns similar to smyhc3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smyhc3 ENSDARG00000114031, ENSDARG00000116413 3 2 - - - - - 1.000 - 1.000 - slow myosin heavy chain 3 [Source:ZFIN;Acc:ZDB-GENE-080930-1]
2. GPR141_1 GPR141_1 33 1.616 - - - - - 0.794 - 0.822 -
3. sox17 ENSDARG00000101717 11 1 - - - - - - - 1.000 - SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1]
4. CCDC18 ENSDARG00000078822 5 1 - - - - - - - 1.000 - coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
5. v2rh14 ENSDARG00000068520, ENSDARG00000116571 3 1 - - - - - - - 1.000 - vomeronasal 2 receptor, h14 [Source:ZFIN;Acc:ZDB-GENE-050419-221]
6. si:dkey-95h12.1 ENSDARG00000040100 2 1 - - - - - - - 1.000 - si:dkey-95h12.1 [Source:ZFIN;Acc:ZDB-GENE-060503-85]
7. si:dkey-58f10.4 ENSDARG00000094820 3 1 - - - - - - - 1.000 - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
8. PATL2 PATL2 10 1 - - - - - - - 1.000 -
9. kcnv2a ENSDARG00000076644 2 1 - - - - - 1.000 - - - potassium channel, subfamily V, member 2a [Source:ZFIN;Acc:ZDB-GENE-091117-27]
10. zgc:77816 zgc:77816 800 1 - - - - - 1.000 - - -
11. csrp1b ENSDARG00000030980 2 1 - - - - - - - 1.000 - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
12. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - - - 1.000 - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
13. akt3a_1 ENSDARG00000104810 12 1 - - - - - - - 1.000 - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
14. stat1b ENSDARG00000076182 4 1 - - - - - - - 1.000 - signal transducer and activator of transcription 1b [Source:ZFIN;Acc:ZDB-GENE-030616-23]
15. si:dkey-20j1.2 1 1 - - - - - - - 1.000 - si:dkey-20j1.2, transcript variant X1
16. si:ch211-212i14.4 si:ch211-212i14.4 4 1 - - - - - - - 1.000 -
17. PLCXD1 ENSDARG00000088798 23 0.982 - - - - - 0.982 - - - phosphatidylinositol-specific phospholipase C, X domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131127-240]
18. AP1S3 AP1S3 8 0.962 - - - - - 0.962 - - -
19. dnm2a ENSDARG00000069937 32 0.96 - - - - - - - 0.960 - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
20. si:ch211-272h9.5 ENSDARG00000092167 8 0.952 - - - - - - - 0.952 - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
21. si:ch211-181d7.1 ENSDARG00000088274, ENSDARG00000091847 18 0.952 - - - - - - - 0.952 - si:ch211-181d7.1 [Source:ZFIN;Acc:ZDB-GENE-121214-14]
22. irg1 22 0.949 - - - - - - - 0.949 - immunoresponsive 1 homolog (mouse)
23. si:ch211-10j20.1 si:ch211-10j20.1 24 0.949 - - - - - - - 0.949 -
24. FP236276.2 FP236276.2 43 0.93 - - - - - 0.930 - - -
25. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 0.928 - - - - - - - 0.928 - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
26. si:ch211-141e20.5 si:ch211-141e20.5 7 0.928 - - - - - - - 0.928 -
27. BX119916.1 BX119916.1 19 0.928 - - - - - - - 0.928 -
28. si:dkey-167i21.4 si:dkey-167i21.4 12 0.916 - - - - - - - 0.916 -
29. WNT6 WNT6 11 0.914 - - - - - - - 0.914 -
30. gabpb2b ENSDARG00000054344, ENSDARG00000109958 238 0.914 - - - - - 0.914 - - - GA binding protein transcription factor subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-050208-136]
31. nitr2b ENSDARG00000000460, ENSDARG00000114513 2 0.914 - - - - - - - 0.914 - novel immune-type receptor 2b [Source:ZFIN;Acc:ZDB-GENE-001106-6]
32. si:ch73-386o14.1 si:ch73-386o14.1 82 0.913 - - - - - 0.913 - - -
33. vsig8b ENSDARG00000013685 246 0.912 - - - - - 0.912 - - - V-set and immunoglobulin domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-081104-51]
34. ddx26b 79 0.911 - - - - - 0.911 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
35. BX119910.9 BX119910.9 7 0.908 - - - - - - - 0.908 -
36. si:ch211-198c19.3 ENSDARG00000095533 5 0.908 - - - - - - - 0.908 - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
37. fam203a fam203a 570 0.908 - - - - - 0.908 - - -
38. RETSAT ENSDARG00000070140 36 0.906 - - - - - 0.906 - - - retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]
39. BX323854.3 BX323854.3 62 0.905 - - - - - 0.905 - - -
40. wu:fb68b01 wu:fb68b01 42 0.902 - - - - - 0.902 - - -
41. arhgap17b ENSDARG00000062263 55 0.897 - - - - - 0.897 - - - Rho GTPase activating protein 17b [Source:ZFIN;Acc:ZDB-GENE-080220-26]
42. MAP3K2 ENSDARG00000062884 34 0.897 - - - - - - - 0.897 - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
43. wbp2nl ENSDARG00000044852 14 0.894 - - - - - 0.894 - - - WBP2 N-terminal like [Source:ZFIN;Acc:ZDB-GENE-030131-4012]
44. wdr17 ENSDARG00000075098 83 0.892 - - - - - 0.892 - - - WD repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-090313-131]
45. chd 56 0.881 - - - - - 0.881 - - - chordin
46. hoxa11a ENSDARG00000104162 283 0.877 - - - - - 0.877 - - - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
47. si:ch211-14a11.5 199 0.877 - - - - - 0.877 - - - si:ch211-14a11.5
48. THEG ENSDARG00000078644 121 0.874 - - - - - 0.874 - - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
49. sult2st1 ENSDARG00000033170 29 0.874 - - - - - 0.874 - - - sulfotransferase family 2, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-114]
50. polr1b ENSDARG00000077469, ENSDARG00000115880 313 0.87 - - - - - 0.870 - - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
51. nr5a1a ENSDARG00000103176 12 0.869 - - - - - 0.869 - - - nuclear receptor subfamily 5, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-010504-1]
52. C9H3orf38 C9H3orf38 83 0.865 - - - - - 0.865 - - -
53. clcnk ENSDARG00000022560 355 0.865 - - - - - 0.865 - - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
54. FP102192.1 ENSDARG00000101104 32 0.863 - - - - - - - 0.863 - protein FAM111A-like [Source:NCBI gene;Acc:101886648]
55. si:ch73-239k17.1 si:ch73-239k17.1 44 0.863 - - - - - - - 0.863 -
56. CU184872.1 CU184872.1 15 0.861 - - - - - - - 0.861 -
57. stk35 ENSDARG00000086856 289 0.861 - - - - - 0.861 - - - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
58. gpx1b ENSDARG00000006207 67 0.856 - - - - - 0.856 - - - glutathione peroxidase 1b [Source:ZFIN;Acc:ZDB-GENE-040912-60]
59. swap70a ENSDARG00000051819 115 0.856 - - - - - 0.856 - - - switching B cell complex subunit SWAP70a [Source:ZFIN;Acc:ZDB-GENE-040426-1182]
60. slc12a3 ENSDARG00000013855 990 0.854 - - - - - 0.854 - - - solute carrier family 12 (sodium/chloride transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9505]
61. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 0.853 - - - - - 0.853 - - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
62. rpp38 ENSDARG00000040350 558 0.851 - - - - - 0.851 - - - ribonuclease P/MRP 38 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-258]
63. frs2a ENSDARG00000045873 148 0.849 - - - - - 0.849 - - - fibroblast growth factor receptor substrate 2a [Source:ZFIN;Acc:ZDB-GENE-060503-462]
64. ccl-c5a ccl-c5a 217 0.848 - - - - - 0.848 - - -
65. si:dkey-247i3.3 si:dkey-247i3.3 297 0.842 - - - - - 0.842 - - -
66. si:ch1073-174d20.2 ENSDARG00000079651 171 0.839 - - - - - 0.839 - - - si:ch1073-174d20.2 [Source:ZFIN;Acc:ZDB-GENE-121214-51]
67. zmynd19 ENSDARG00000100773 224 0.838 - - - - - 0.838 - - - zinc finger, MYND-type containing 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4460]
68. NRTN ENSDARG00000079849 77 0.837 - - - - - 0.837 - - - neurturin [Source:ZFIN;Acc:ZDB-GENE-100427-6]
69. mycbpap ENSDARG00000069194 32 0.835 - - - - - 0.835 - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
70. vil1 ENSDARG00000040466 81 0.834 - - - - - 0.834 - - - villin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-799]
71. si:dkey-27i16.2 ENSDARG00000098293 48 0.832 - - - - - 0.832 - - - si:dkey-27i16.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9667]
72. bsnd ENSDARG00000086265 178 0.828 - - - - - 0.828 - - - barttin CLCNK-type chloride channel accessory beta subunit [Source:ZFIN;Acc:ZDB-GENE-070705-548]
73. zgc:136895 zgc:136895 41 0.828 - - - - - - - 0.828 -
74. MMADHC ENSDARG00000005870 212 0.827 - - - - - 0.827 - - - methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-040704-50]
75. mark2b ENSDARG00000032458 821 0.827 - - - - - 0.827 - - - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
76. FP015791.1 FP015791.1 90 0.824 - - - - - 0.824 - - -
77. mir30c 904 0.823 - - - - - 0.823 - - - microRNA 30c
78. ZDHHC21 ENSDARG00000110709 295 0.82 - - - - - 0.820 - - - zinc finger, DHHC-type containing 21 [Source:ZFIN;Acc:ZDB-GENE-080401-2]
79. si:ch211-69i14.10 si:ch211-69i14.10 1939 0.819 - - - - - 0.819 - - -
80. CT027762.3 CT027762.3 17 0.815 - - - - - 0.815 - - -
81. CABZ01079251.1 ENSDARG00000100498 38 0.813 - - - - - 0.813 - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
82. si:ch211-39a7.1 ENSDARG00000037427 31 0.808 - - - - - - - 0.808 - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
83. fut7 ENSDARG00000044775 25 0.802 - - - - - - - 0.802 - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
84. KLHL35 ENSDARG00000063577 77 0.799 - - - - - - - 0.799 - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
85. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 0.797 - - - - - 0.797 - - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
86. si:dkey-121j17.5 ENSDARG00000014232 18 0.795 - - - - - - - 0.795 - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
87. zgc:158222 ENSDARG00000051873, ENSDARG00000112532 642 0.795 - - - - - 0.795 - - - zgc:158222 [Source:ZFIN;Acc:ZDB-GENE-070112-1522]
88. METTL15 ENSDARG00000089236 39 0.79 - - - - - - - 0.790 - methyltransferase like 15 [Source:ZFIN;Acc:ZDB-GENE-130530-958]
89. bbs4 ENSDARG00000063522 247 0.789 - - - - - 0.789 - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
90. ero1l ero1l 66 0.788 - - - - - 0.788 - - -
91. TMEM150A_1 TMEM150A_1 90 0.786 - - - - - 0.786 - - -
92. angel2 ENSDARG00000016743 322 0.786 - - - - - 0.786 - - - angel homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6498]
93. cisd2 ENSDARG00000052703 2841 0.785 - - - - - 0.785 - - - CDGSH iron sulfur domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1381]
94. thap3 ENSDARG00000041080, ENSDARG00000114392 220 0.784 - - - - - 0.784 - - - THAP domain containing, apoptosis associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-050327-4]
95. INPP5K INPP5K 137 0.778 - - - - - 0.778 - - -
96. cyp27a1.4 ENSDARG00000055159 47 0.778 - - - - - 0.778 - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
97. thumpd2 ENSDARG00000093070 154 0.774 - - - - - 0.774 - - - THUMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090428-2]
98. ipo4 ENSDARG00000041493 1578 0.772 - - - - - 0.772 - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
99. defbl1 ENSDARG00000075161 211 0.771 - - - - - 0.771 - - - defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
100. CR391961.2 CR391961.2 107 0.768 - - - - - 0.768 - - -

There are 144 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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