Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smyhc1

Gene Name Gene ID Reads Annotation
smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]










Genes with expression patterns similar to smyhc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
2. klhl31 ENSDARG00000039066 13656 4.678 0.808 - 0.737 0.805 0.796 - - 0.751 0.781 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
3. myl10 ENSDARG00000062592 101207 4.525 0.907 - 0.927 0.865 0.948 - - 0.878 - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
4. si:ch211-156j16.1 ENSDARG00000092035 7441 4.436 0.850 - 0.713 0.730 0.703 - - 0.710 0.730 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
5. tpm2 ENSDARG00000104682 36853 4.381 0.911 - 0.794 0.928 0.915 - - 0.833 - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
6. tnnc1b ENSDARG00000037539 13945 4.261 - - 0.876 0.732 0.864 - - 0.874 0.915 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
7. zgc:66286 zgc:66286 118947 4.234 0.920 - 0.812 - 0.948 - - 0.843 0.711
8. tnni2b.1 ENSDARG00000035958 51597 4.155 0.799 - 0.840 - 0.856 - - 0.787 0.873 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
9. nexn ENSDARG00000057317 10972 4.046 0.897 - 0.820 0.724 0.840 - - - 0.765 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
10. txlnba ENSDARG00000020594 9385 4.045 - - 0.802 0.850 0.800 - - 0.781 0.812 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
11. tmem38a ENSDARG00000024047 41883 3.992 0.862 - 0.783 0.762 0.787 - - 0.798 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
12. desma ENSDARG00000058656 30292 3.885 0.867 - 0.760 0.821 0.724 - - 0.713 - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
13. klhl40a ENSDARG00000039052 2537 3.866 0.787 - 0.808 0.788 0.774 - - - 0.709 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
14. klhl41b ENSDARG00000006757 10762 3.437 0.841 - 0.894 0.822 0.880 - - - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
15. PTGES3L PTGES3L 4801 3.43 0.843 - 0.881 - 0.845 - - - 0.861
16. hsp90aa1.1 ENSDARG00000010478 47784 3.398 0.879 - 0.775 0.845 0.899 - - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
17. tnnt2c ENSDARG00000032242 28801 3.273 0.826 - - 0.801 0.905 - - - 0.741 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
18. tmem161a ENSDARG00000012790 16094 3.231 0.861 - 0.864 0.712 0.794 - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
19. AIMP1 ENSDARG00000060036 4136 3.146 0.807 - 0.751 0.761 0.827 - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
20. vcl vcl 6667 3.125 0.862 - - 0.740 - - - 0.740 0.783
21. apobec2a ENSDARG00000018881 4790 3.107 0.805 - 0.746 - - - - 0.736 0.820 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
22. unc45b ENSDARG00000008433 8298 3.099 0.806 - - 0.740 0.810 - - - 0.743 unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
23. tpm3 ENSDARG00000005162 86049 3.047 0.702 - - 0.720 0.808 - - 0.817 - tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
24. smyd2b ENSDARG00000005629 8181 3.044 0.884 - 0.709 0.708 0.743 - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
25. hoxb9a ENSDARG00000056023 11856 3.011 - - 0.787 0.781 0.739 - - 0.704 - homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
26. tmem182 tmem182 12589 2.983 0.715 - 0.701 0.760 - - - 0.807 -
27. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 2.965 - - 0.790 0.733 0.713 - - - 0.729 cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
28. si:ch211-207e19.11 si:ch211-207e19.11 9604 2.651 - - 0.891 - 0.869 - - - 0.891
29. tnni1al 8272 2.545 0.914 - - - - - - 0.791 0.840 troponin I, skeletal, slow like, transcript variant X1
30. ak1 ENSDARG00000001950 26964 2.515 0.833 - - 0.755 - - 0.927 - - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
31. mef2ca ENSDARG00000029764 18547 2.477 0.733 - 0.832 - 0.912 - - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
32. zgc:153662 zgc:153662 4604 2.471 0.880 - 0.777 - 0.814 - - - -
33. aldoab ENSDARG00000034470 88942 2.462 0.896 0.764 - 0.802 - - - - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
34. myhz2 ENSDARG00000012944 69921 2.456 0.881 - - 0.835 0.740 - - - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
35. acta1a ENSDARG00000036371 137508 2.448 0.789 - - - 0.940 - - 0.719 - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
36. ppapdc3 ppapdc3 4924 2.435 0.740 - 0.837 - 0.858 - - - -
37. smtnl1 ENSDARG00000041257 7410 2.435 0.913 - - 0.745 - - - - 0.777 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
38. hfe2 4113 2.409 0.882 - - - 0.712 - - - 0.815 hemochromatosis type 2
39. smyd1b ENSDARG00000091253 4964 2.404 0.914 - - 0.775 - - - - 0.715 SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
40. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.4 0.848 - - - 0.806 - - - 0.746 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
41. txlnbb ENSDARG00000076241 6396 2.392 0.842 - 0.791 - - - - - 0.759 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
42. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 2.368 - - - 0.779 0.760 - - - 0.829 heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
43. srl ENSDARG00000104587 11126 2.364 0.837 - - 0.755 - - - 0.772 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
44. chrna1 ENSDARG00000009021 2931 2.355 0.845 - 0.721 - - - - - 0.789 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
45. CU633479.5 ENSDARG00000114818 1815 2.345 0.826 - 0.732 - - - - - 0.787
46. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 2.34 0.779 - 0.755 - - - - 0.806 - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
47. ITGB1BP2 ENSDARG00000030176 2472 2.335 0.858 - 0.746 - - - - - 0.731 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
48. SYNPO2L SYNPO2L 6697 2.329 0.854 - - - - - 0.757 - 0.718
49. ntmt1 ENSDARG00000022399 5779 2.327 0.786 - - 0.732 0.809 - - - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
50. actn3b ENSDARG00000001431 15747 2.319 0.867 - - 0.741 0.711 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
51. limch1a ENSDARG00000074275 2981 2.311 0.805 - 0.742 - - - - - 0.764 LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
52. cacng1 cacng1 3118 2.296 0.814 - 0.770 - 0.712 - - - -
53. myod1 ENSDARG00000030110 6019 2.29 0.820 - - - 0.723 - - - 0.747 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
54. purbb ENSDARG00000103546 4983 2.289 - - 0.765 0.774 0.750 - - - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
55. hoxd9a ENSDARG00000059274 3414 2.26 - - 0.743 - 0.729 - - - 0.788 homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
56. trim55a ENSDARG00000029596 2858 2.258 0.815 - 0.720 - - - - - 0.723 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
57. mdh2 ENSDARG00000043371 14485 2.256 0.742 - - - - - - 0.728 0.786 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
58. col9a2 ENSDARG00000024492 20234 2.242 0.776 - 0.740 - - - - - 0.726 procollagen, type IX, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9786]
59. zgc:113232 ENSDARG00000040118, ENSDARG00000116977 5865 2.239 0.767 - 0.746 - 0.726 - - - - zgc:113232 [Source:ZFIN;Acc:ZDB-GENE-050327-86]
60. si:dkeyp-12a9.5 3058 2.235 0.745 - 0.746 - - - - - 0.744 si:dkeyp-12a9.5
61. ttnb ttnb 73721 2.21 0.787 - - - 0.718 - 0.705 - -
62. ahsa1 ahsa1 2012 2.198 0.763 - 0.706 - 0.729 - - - -
63. hspb1 ENSDARG00000041065 13534 2.198 - - 0.738 0.736 - - - - 0.724 heat shock protein, alpha-crystallin-related, 1 [Source:ZFIN;Acc:ZDB-GENE-030326-4]
64. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.193 0.747 - 0.723 - 0.723 - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
65. CU638714.1 ENSDARG00000100303 2132 2.172 0.707 - 0.706 - 0.759 - - - -
66. pkmb ENSDARG00000099860 25094 1.78 0.832 - - - - - 0.948 - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
67. casq2 ENSDARG00000008982 21802 1.726 0.883 - - - - - - 0.843 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
68. pvalb4 ENSDARG00000024433 35736 1.72 0.940 - - - - - - 0.780 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
69. xirp2a ENSDARG00000071113 7113 1.667 0.865 - - - - - - - 0.802 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
70. col9a1 col9a1 34481 1.658 - - 0.817 - - - - 0.841 -
71. si:ch211-32p8.1 si:ch211-32p8.1 3402 1.637 0.808 - - - - - - - 0.829
72. ttna ttna 101197 1.635 0.869 - - - 0.766 - - - -
73. tnnt2d ENSDARG00000002988 7590 1.627 0.908 - - - - - - - 0.719 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
74. chrnd ENSDARG00000019342 2728 1.623 0.839 - 0.784 - - - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
75. acta1b ENSDARG00000055618 195597 1.623 0.848 - - - - - 0.775 - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
76. hhatlb ENSDARG00000005139 6674 1.622 0.879 - - - - - - 0.743 - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
77. NRAP ENSDARG00000009341 3565 1.621 0.893 - - - - - - 0.728 - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
78. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 1.621 0.856 - 0.765 - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
79. sox6 ENSDARG00000015536 7728 1.618 0.795 - - - 0.823 - - - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
80. murca murca 6614 1.614 0.875 - - - - - - - 0.739
81. cmn ENSDARG00000055527 14039 1.607 0.768 - 0.839 - - - - - - calymmin [Source:ZFIN;Acc:ZDB-GENE-000208-9]
82. CABZ01079764.1 CABZ01079764.1 12103 1.607 - - - - - - - 0.840 0.767
83. atp5g1 51897 1.606 0.801 - - - - - - - 0.805 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
84. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.605 0.846 - - - - 0.759 - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
85. tnni2a.4 ENSDARG00000029069 122344 1.598 0.854 - - - - 0.744 - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
86. mt-co3 ENSDARG00000063912 398919 1.594 0.881 0.713 - - - - - - - cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
87. tpma ENSDARG00000033683 752432 1.594 0.881 - - - - - - 0.713 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
88. synpo2lb ENSDARG00000078696 2361 1.594 0.848 - - - 0.746 - - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
89. CR388002.1 CR388002.1 1998 1.594 0.865 - - - 0.729 - - - -
90. zgc:92518 ENSDARG00000016343 3837 1.592 0.859 - - - 0.733 - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
91. myoz2b ENSDARG00000037266 2139 1.587 0.864 - - - - - - - 0.723 myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
92. MYOM3 2720 1.582 0.832 - 0.750 - - - - - - myomesin 3, transcript variant X2
93. znf106a ENSDARG00000016651 6049 1.578 0.823 - - 0.755 - - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
94. trim63 trim63 2437 1.576 0.822 - 0.754 - - - - - -
95. jph2 ENSDARG00000028625 6706 1.575 0.851 - - - - - - 0.724 - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
96. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.574 0.834 - 0.740 - - - - - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
97. si:ch73-21k16.6 si:ch73-21k16.6 4896 1.574 - - 0.760 - - - - - 0.814
98. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.572 0.812 - 0.760 - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
99. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.566 - - - - - - - 0.754 0.812 synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
100. CABZ01074435.1 CABZ01074435.1 4551 1.562 0.860 - 0.702 - - - - - -

There are 465 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA