Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smyd5

Gene Name Gene ID Reads Annotation
smyd5 ENSDARG00000071669 1194 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]










Genes with expression patterns similar to smyd5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smyd5 ENSDARG00000071669 1194 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
2. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.844 - - - - - - - 0.883 0.961 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
3. apex1 ENSDARG00000045843 6345 1.803 - 0.816 - - - - - - 0.987 APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
4. cav3 ENSDARG00000024141 14906 1.769 - - - - - - - 0.836 0.933 caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
5. NDST1 NDST1 1584 1.738 - - - - - - 0.739 - 0.999
6. xpo1a ENSDARG00000078041 3544 1.69 - 0.782 - - - - - 0.908 - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
7. G3BP2_1 G3BP2_1 2390 1.68 - 0.806 - - - - - 0.874 -
8. midn ENSDARG00000018524 7559 1.657 - 0.705 - - - - - - 0.952 midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
9. mbip ENSDARG00000019364 238 1.609 - - 0.792 - - - 0.817 - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
10. FP236789.2 FP236789.2 335 1.603 0.789 - - - - - 0.814 - -
11. BX664752.1 BX664752.1 64 1.577 0.732 - 0.845 - - - - - -
12. abcb8 ENSDARG00000056672 589 1.515 - - 0.733 - - 0.782 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050410-6]
13. HPS6 265 1.502 0.778 - - - - - 0.724 - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
14. zgc:171727 ENSDARG00000105781 350 1.494 - - 0.758 - - - 0.736 - - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
15. kin ENSDARG00000045515 109 1.493 - 0.715 - - - 0.778 - - - Kin17 DNA and RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3689]
16. smoc2 ENSDARG00000088157 646 1.492 0.744 0.748 - - - - - - - SPARC related modular calcium binding 2 [Source:ZFIN;Acc:ZDB-GENE-021031-5]
17. rttn ENSDARG00000004131 154 1.486 0.770 - 0.716 - - - - - - rotatin [Source:ZFIN;Acc:ZDB-GENE-090609-5]
18. si:ch73-138e16.8 175 1.474 0.738 - - - - - 0.736 - - si:ch73-138e16.8
19. metap1d ENSDARG00000019715, ENSDARG00000112086 236 1.439 - 0.702 0.737 - - - - - - methionyl aminopeptidase type 1D (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-050522-71]
20. dpcd ENSDARG00000060501 479 1.424 - 0.705 0.719 - - - - - - deleted in primary ciliary dyskinesia homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-060825-166]
21. serpinb1 ENSDARG00000055416 1320 1 - - - - - - - - 1.000 serpin peptidase inhibitor, clade B (ovalbumin), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-400]
22. BX296557.2 BX296557.2 1083 1 - - - - - - - - 1.000
23. jam3a ENSDARG00000114589 630 1 - - - - - - - - 1.000 junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
24. PARP14 PARP14 164 1 - - - - - - - 1.000 -
25. tsen2 ENSDARG00000091851 1467 1 - - - - - - - - 1.000 TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
26. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 1 - - - - - - - - 1.000 nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
27. jam2b ENSDARG00000079071 1031 1 - - - - - - - - 1.000 junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
28. C24H7orf50 1417 1 - - - - - - - - 1.000 chromosome 24 C7orf50 homolog, transcript variant X2
29. spag1a ENSDARG00000004017 1140 1 - - - - - - - - 1.000 sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
30. polr3k ENSDARG00000037835 1552 1 - - - - - - - - 1.000 polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
31. SPDL1 ENSDARG00000103996, ENSDARG00000109617 1473 1 - - - - - - - - 1.000 spindle apparatus coiled-coil protein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-7]
32. cdk5r1b ENSDARG00000045087 2075 1 - - - - - - - - 1.000 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
33. TRIM65 ENSDARG00000077098 991 1 - - - - - - - - 1.000 tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
34. agpat9 agpat9 938 1 - - - - - - - - 1.000
35. zgc:162967 zgc:162967 2132 1 - - - - - - - - 1.000
36. pir ENSDARG00000056638 722 0.999 - - - - - - - 0.999 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
37. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 0.999 - - - - - - - - 0.999 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
38. kbtbd12 ENSDARG00000001882 1196 0.999 - - - - - - - - 0.999 kelch repeat and BTB (POZ) domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-050904-1]
39. acbd6 ENSDARG00000039456 2355 0.999 - - - - - - - - 0.999 acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
40. ceacam1 ENSDARG00000041119, ENSDARG00000111374 1763 0.999 - - - - - - - - 0.999 carcinoembryonic antigen-related cell adhesion molecule 1 [Source:ZFIN;Acc:ZDB-GENE-010724-14]
41. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.999 - - - - - - - - 0.999 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
42. zgc:113019 ENSDARG00000099743 994 0.999 - - - - - - - 0.999 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
43. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 0.999 - - - - - - - - 0.999 PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
44. vsnl1a ENSDARG00000023228 1584 0.999 - - - - - - - - 0.999 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
45. cpm ENSDARG00000011769, ENSDARG00000113736 1113 0.999 - - - - - - - - 0.999 carboxypeptidase M [Source:ZFIN;Acc:ZDB-GENE-041210-191]
46. mtmr9 ENSDARG00000015860 1339 0.999 - - - - - - - - 0.999 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
47. hsd17b4 ENSDARG00000101239 301 0.999 - - - - - - - 0.999 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
48. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 0.999 - - - - - - - - 0.999 DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
49. hcst ENSDARG00000092074 172 0.999 - - - - - - - 0.999 - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
50. gltscr1 gltscr1 1487 0.999 - - - - - - - - 0.999
51. slc6a11a ENSDARG00000074002 189 0.999 - - - - - - - 0.999 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
52. tmed7 ENSDARG00000046022 2435 0.999 - - - - - - - - 0.999 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
53. NRD1 NRD1 3486 0.999 - - - - - - - - 0.999
54. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.999 - - - - - - - 0.999 - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
55. hddc3 ENSDARG00000020473 2814 0.999 - - - - - - - - 0.999 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
56. CABZ01073405.1 CABZ01073405.1 275 0.999 - - - - - - - 0.999 -
57. ftr23 ENSDARG00000067985 254 0.998 - - - - - - - 0.998 - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
58. cnrip1a ENSDARG00000091683 1491 0.998 - - - - - - - - 0.998 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
59. golga4 ENSDARG00000075331 447 0.998 - - - - - - - 0.998 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
60. C6H1orf159 C6H1orf159 406 0.998 - - - - - - - 0.998 -
61. gata3 ENSDARG00000016526 1857 0.998 - - - - - - - - 0.998 GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
62. si:dkey-238o14.5 si:dkey-238o14.5 450 0.998 - - - - - - - 0.998 -
63. wscd2 ENSDARG00000061819 304 0.998 - - - - - - - 0.998 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
64. cxxc1l cxxc1l 1035 0.998 - - - - - - - 0.998 -
65. nup155 ENSDARG00000001777 3417 0.998 - - - - - - - - 0.998 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
66. nup98 ENSDARG00000074955 3998 0.998 - - - - - - - - 0.998 nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
67. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 0.997 - - - - - - - - 0.997 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
68. prelid1b ENSDARG00000044169 501 0.997 - - - - - - - 0.997 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
69. rdh12 ENSDARG00000018069 396 0.997 - - - - - - - 0.997 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
70. si:dkey-204f11.64 ENSDARG00000094695 586 0.997 - - - - - - - 0.997 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
71. foxp2 ENSDARG00000005453 1504 0.997 - - - - - - - - 0.997 forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
72. prpf39 ENSDARG00000100209 3721 0.997 - - - - - - - - 0.997 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
73. RIN3 ENSDARG00000077618 745 0.997 - - - - - - - 0.997 - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
74. BX957337.1 BX957337.1 1685 0.997 - - - - - - - - 0.997
75. ash1l ENSDARG00000070981 2520 0.997 - - - - - - - - 0.997 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
76. kmt2d ENSDARG00000037060 1232 0.997 - - - - - - - 0.997 - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
77. TAF4 TAF4 658 0.997 - - - - - - - 0.997 -
78. agk ENSDARG00000009837, ENSDARG00000113514 811 0.997 - - - - - - - 0.997 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
79. slc30a9 ENSDARG00000057272 766 0.996 - - - - - - - 0.996 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
80. si:dkey-38p12.2 si:dkey-38p12.2 504 0.996 - - - - - - - 0.996 -
81. mier1b ENSDARG00000001447 1680 0.996 - - - - - - - - 0.996 mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
82. rnf115 ENSDARG00000062450 1284 0.996 - - - - - - - - 0.996 ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
83. eya2 ENSDARG00000018984 1768 0.996 - - - - - - - - 0.996 EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
84. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.996 - - - - - - - 0.996 - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
85. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.996 - - - - - - - 0.996 - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
86. naa15a ENSDARG00000003213 5889 0.995 - - - - - - - - 0.995 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
87. C17H15orf57 C17H15orf57 1366 0.995 - - - - - - - 0.995 -
88. ndufa2 ENSDARG00000021984 4754 0.995 - - - - - - - - 0.995 NADH:ubiquinone oxidoreductase subunit A2 [Source:ZFIN;Acc:ZDB-GENE-050522-377]
89. nptx1l ENSDARG00000074671 569 0.995 - - - - - - - 0.995 - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
90. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.994 - - - - - - - 0.994 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
91. ubqln4 ENSDARG00000052975 6453 0.994 - - - - - - - - 0.994 ubiquilin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6269]
92. stip1 ENSDARG00000004906 7742 0.994 - - - - - - - - 0.994 stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
93. igfbp5b ENSDARG00000025348 3803 0.994 - - - - - - - - 0.994 insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
94. USP6 USP6 613 0.993 - - - - - - - 0.993 -
95. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.993 - - - - - - - 0.993 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
96. nid1a ENSDARG00000068710 3948 0.993 - - - - - - - - 0.993 nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
97. araf ENSDARG00000054533 1132 0.993 - - - - - - - 0.993 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
98. zgc:195001 ENSDARG00000070484 3281 0.993 - - - - - - - - 0.993 zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
99. BAZ2B BAZ2B 3285 0.993 - - - - - - - - 0.993
100. myo9b ENSDARG00000077410 1956 0.993 - - - - - - - 0.993 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]

There are 950 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA