Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smyd3

Gene Name Gene ID Reads Annotation
smyd3 ENSDARG00000058050 69 SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]










Genes with expression patterns similar to smyd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smyd3 ENSDARG00000058050 69 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
2. rergla ENSDARG00000019396 42 2.226 0.726 0.758 - - - - 0.742 - - RERG/RAS-like a [Source:ZFIN;Acc:ZDB-GENE-040718-198]
3. zgc:113294 ENSDARG00000032285 132 1.88 - - - - - - 0.914 0.966 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
4. DSP DSP 199 1.787 - - - - - - 0.907 0.880 -
5. CEACAM7 CEACAM7 46 1.772 - - - - 0.827 - 0.945 - -
6. tmc6a ENSDARG00000069787 3 1.729 - 0.784 - - - - 0.945 - - transmembrane channel-like 6a [Source:ZFIN;Acc:ZDB-GENE-081114-3]
7. si:ch211-71k24.5 si:ch211-71k24.5 9 1.729 - 0.784 - - - - 0.945 - -
8. klhl4 ENSDARG00000016531 47 1.714 - 0.905 - - - 0.809 - - - kelch-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-070410-63]
9. traf1 ENSDARG00000069482 50 1.673 - - - - - 0.709 - 0.964 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
10. her11 ENSDARG00000002707 29 1.664 - - - - 0.810 0.854 - - - hairy-related 11 [Source:ZFIN;Acc:ZDB-GENE-040824-4]
11. macrod1 ENSDARG00000029609 66 1.635 - 0.926 - - - 0.709 - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
12. znf438 ENSDARG00000061311 524 1.616 - - - - 0.720 - - 0.896 - zinc finger protein 438 [Source:ZFIN;Acc:ZDB-GENE-060929-868]
13. lcp2a ENSDARG00000055955 23 1.612 - 0.705 - - - 0.907 - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
14. fli1a ENSDARG00000054632 330 1.61 0.797 - - - - 0.813 - - - Fli-1 proto-oncogene, ETS transcription factor a [Source:ZFIN;Acc:ZDB-GENE-980526-426]
15. ANKS3 ENSDARG00000038557 235 1.579 - 0.794 - - - 0.785 - - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080204-51]
16. mtx1b ENSDARG00000036109 445 1.575 - - - - - 0.729 - 0.846 - metaxin 1b [Source:ZFIN;Acc:ZDB-GENE-021210-1]
17. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1.564 - 0.793 - - - 0.771 - - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
18. ykt6 ENSDARG00000038308 473 1.561 - 0.811 - - - - - 0.750 - YKT6 v-SNARE homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-733]
19. anxa5a ENSDARG00000026406 19 1.555 - 0.784 - - - - 0.771 - - annexin A5a [Source:ZFIN;Acc:ZDB-GENE-080220-29]
20. syn1 ENSDARG00000060368, ENSDARG00000111164 397 1.544 - 0.717 - - - - - 0.827 - synapsin I [Source:ZFIN;Acc:ZDB-GENE-081105-93]
21. si:rp71-36n21.1 93 1.537 - - - - 0.816 - 0.721 - - si:rp71-36n21.1
22. lingo4b ENSDARG00000078527 235 1.535 0.817 - - - - - 0.718 - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
23. CABZ01054394.3 CABZ01054394.3 60 1.527 - 0.751 - - - - 0.776 - -
24. DUSP18 DUSP18 117 1.499 - - - - 0.798 - 0.701 - -
25. rhof ENSDARG00000054389, ENSDARG00000111798 15 1.472 - 0.763 - - - 0.709 - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
26. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 1.471 - - - - 0.762 0.709 - - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
27. MAN1B1 MAN1B1 47 1.467 - 0.761 - - - - 0.706 - -
28. zgc:171501 ENSDARG00000075375 11 1 - - - - - 1.000 - - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
29. NETO2_1 NETO2_1 15 1 - - - - - 1.000 - - -
30. CABZ01072557.1 CABZ01072557.1 9 1 - - - - - 1.000 - - -
31. gcgb ENSDARG00000040907 182 1 - - - - - 1.000 - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
32. mvb12bb ENSDARG00000079478 9 1 - - - - - 1.000 - - - multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
33. slc16a9a ENSDARG00000013926, ENSDARG00000113368 64 1 - - - - - 1.000 - - - solute carrier family 16, member 9a [Source:ZFIN;Acc:ZDB-GENE-040426-1364]
34. si:dkey-10p5.7 26 1 - - - - - 1.000 - - - si:dkey-10p5.7
35. 5S_rRNA_16 5S_rRNA_16 10 1 - - - - - 1.000 - - -
36. frmd4bb ENSDARG00000076496 18 0.991 - - - - - - - 0.991 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
37. d2hgdh ENSDARG00000060210 362 0.982 - - - - - - - 0.982 - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
38. RNF115 ENSDARG00000062450 83 0.98 - - - - - - - 0.980 - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
39. NGFR NGFR 186 0.978 - - - - - - - 0.978 -
40. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.978 - - - - - - - 0.978 - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
41. ASTL ASTL 24 0.976 - - - - - - - 0.976 -
42. cyp2k8 ENSDARG00000101190 69 0.976 - - - - - - - 0.976 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
43. CABZ01086801.1 CABZ01086801.1 41 0.97 - - - - - - - 0.970 -
44. si:dkey-93n13.2 ENSDARG00000092816 119 0.968 - - - - - - - 0.968 - si:dkey-93n13.2 [Source:ZFIN;Acc:ZDB-GENE-091204-177]
45. znf395 znf395 60 0.968 - - - - - - 0.968 - -
46. POLRMT ENSDARG00000101220 215 0.966 - - - - - - - 0.966 - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
47. si:ch211-39k3.2 ENSDARG00000075881 531 0.964 - - - - - - - 0.964 - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
48. si:ch211-155o21.4 ENSDARG00000096567 25 0.963 - - - - - - 0.963 - - si:ch211-155o21.4 [Source:ZFIN;Acc:ZDB-GENE-121214-169]
49. si:ch211-225b11.4 ENSDARG00000093563 42 0.963 - - - - - - 0.963 - - si:ch211-225b11.4 [Source:ZFIN;Acc:ZDB-GENE-060526-114]
50. tcf21 ENSDARG00000036869, ENSDARG00000111209 37 0.963 - - - - - - 0.963 - - transcription factor 21 [Source:ZFIN;Acc:ZDB-GENE-051113-88]
51. zgc:114037_4 57 0.963 - - - - - - 0.963 - - zgc:114037
52. si:dkey-14d8.2 38 0.962 - - - - - - - 0.962 - si:dkey-14d8.2
53. cd40 ENSDARG00000054968 90 0.961 - - - - - - - 0.961 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
54. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 0.961 - - - - - - - 0.961 - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
55. dusp5 ENSDARG00000019307, ENSDARG00000110831 476 0.956 - - - - - - - 0.956 - dual specificity phosphatase 5 [Source:ZFIN;Acc:ZDB-GENE-010625-1]
56. nkx2.9 ENSDARG00000020332 357 0.955 - - - - - - - 0.955 - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
57. crfb17 511 0.955 - - - - - - - 0.955 - cytokine receptor family member B17
58. zgc:174268 ENSDARG00000076807 250 0.954 - - - - - - - 0.954 - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
59. znf511 ENSDARG00000000760 446 0.951 - - - - - - - 0.951 - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
60. rrp15 ENSDARG00000013478 1126 0.951 - - - - - - - 0.951 - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]
61. si:ch211-237l4.6 ENSDARG00000056915 49 0.951 - - - - - - - 0.951 - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
62. BX511263.1 BX511263.1 64 0.951 - - - - - - - 0.951 -
63. MAN2C1 ENSDARG00000079835 305 0.949 - - - - - - - 0.949 - mannosidase, alpha, class 2C, member 1 [Source:ZFIN;Acc:ZDB-GENE-101103-4]
64. si:rp71-10g3.1 si:rp71-10g3.1 6 0.948 - - - - - 0.948 - - -
65. KCTD20 6 0.948 - - - - - 0.948 - - - potassium channel tetramerization domain containing 20, transcript variant X2
66. scarb1 ENSDARG00000101557 503 0.948 - - - - - - - 0.948 - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
67. irx4b ENSDARG00000036051 54 0.945 - - - - - - 0.945 - - iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]
68. SNORA31 SNORA31 23 0.945 - - - - - - 0.945 - -
69. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.945 - - - - - - 0.945 - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
70. cs_1 ENSDARG00000103364 2 0.945 - - - - - - 0.945 - - citrate synthase [Source:ZFIN;Acc:ZDB-GENE-030131-1058]
71. taar19o ENSDARG00000093266, ENSDARG00000116999 1 0.945 - - - - - - 0.945 - - trace amine associated receptor 19o [Source:ZFIN;Acc:ZDB-GENE-060414-13]
72. camk1db ENSDARG00000017446 47 0.945 - - - - - - 0.945 - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
73. BX469910.2 ENSDARG00000096127 6 0.945 - - - - - - 0.945 - -
74. GSTK1_2 GSTK1_2 8 0.945 - - - - - - 0.945 - -
75. vmhcl 119 0.945 - - - - - - 0.945 - - ventricular myosin heavy chain-like
76. C20H1orf95 C20H1orf95 12 0.945 - - - - - - 0.945 - -
77. si:ch211-264e16.2 ENSDARG00000094415 4 0.945 - - - - - - 0.945 - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
78. BX322608.1 ENSDARG00000111690 326 0.945 - - - - - - 0.945 - -
79. rsrc1 ENSDARG00000033987 552 0.945 - - - - - - - 0.945 - arginine/serine-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2374]
80. CT573389.1 CT573389.1 26 0.945 - - - - - - 0.945 - -
81. si:ch73-30l9.1 ENSDARG00000095891 42 0.945 - - - - - - 0.945 - - si:ch73-30l9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-132]
82. map3k12 ENSDARG00000103651 3 0.945 - - - - - - 0.945 - - mitogen-activated protein kinase kinase kinase 12 [Source:ZFIN;Acc:ZDB-GENE-040426-2436]
83. tacr1b ENSDARG00000102900 1 0.945 - - - - - - 0.945 - - tachykinin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-091117-17]
84. epsti1 ENSDARG00000094578 33 0.945 - - - - - - 0.945 - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
85. FP103005.1 ENSDARG00000099852 4 0.945 - - - - - - 0.945 - -
86. DEPDC7 19 0.945 - - - - - - 0.945 - - DEP domain containing 7, transcript variant X1
87. ZNF337_16 ZNF337_16 22 0.945 - - - - - - 0.945 - -
88. abcc9 ENSDARG00000015985 20 0.945 - - - - - - 0.945 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
89. FGFBP2 FGFBP2 16 0.945 - - - - - - 0.945 - -
90. si:dkey-31m5.3 ENSDARG00000110121 1 0.945 - - - - - - 0.945 - - si:dkey-31m5.3 [Source:ZFIN;Acc:ZDB-GENE-070912-515]
91. FMN1 ENSDARG00000011975 2 0.945 - - - - - - 0.945 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
92. ppp6r2a ENSDARG00000045540 60 0.945 - - - - - - 0.945 - - protein phosphatase 6, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5428]
93. v2ra1 ENSDARG00000104881 1 0.945 - - - - - - 0.945 - - vomeronasal 2 receptor, a1 [Source:ZFIN;Acc:ZDB-GENE-050419-156]
94. p4ha1a ENSDARG00000033537, ENSDARG00000114754 38 0.945 - - - - - - 0.945 - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
95. adat3 ENSDARG00000005640 96 0.945 - - - - - - 0.945 - - adenosine deaminase, tRNA-specific 3 [Source:ZFIN;Acc:ZDB-GENE-030616-531]
96. zfpm2a ENSDARG00000040123 46 0.945 - - - - - - 0.945 - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
97. CU183952.2 CU183952.2 6 0.945 - - - - - - 0.945 - -
98. si:dkey-246j7.1 ENSDARG00000095559 4 0.945 - - - - - - 0.945 - - si:dkey-246j7.1 [Source:ZFIN;Acc:ZDB-GENE-050419-230]
99. galca ENSDARG00000037064 12 0.945 - - - - - - 0.945 - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
100. SPP2 ENSDARG00000095590 5 0.945 - - - - - - 0.945 - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]

There are 838 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA