Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smyd1b

Gene Name Gene ID Reads Annotation
smyd1b ENSDARG00000091253 4964 SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]










Genes with expression patterns similar to smyd1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smyd1b ENSDARG00000091253 4964 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
2. AIMP1 ENSDARG00000060036 4136 4.255 0.886 0.939 - 0.730 - 0.713 0.987 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
3. txlnbb ENSDARG00000076241 6396 3.431 0.943 0.902 - - - 0.800 - - 0.786 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
4. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 3.387 0.798 0.781 0.996 - - 0.812 - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
5. plecb ENSDARG00000021987 13621 3.374 0.904 0.902 - 0.774 0.794 - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
6. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 3.302 0.781 0.764 - - - 0.800 0.957 - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
7. smtnl1 ENSDARG00000041257 7410 3.292 0.939 - - 0.763 - 0.818 - 0.772 - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
8. ntmt1 ENSDARG00000022399 5779 3.279 0.869 0.921 - 0.768 - - - - 0.721 N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
9. cnbpa ENSDARG00000045776 8648 3.271 0.824 - - - 0.737 0.755 0.955 - - CCHC-type zinc finger, nucleic acid binding protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5045]
10. vcl vcl 6667 3.261 0.912 0.874 - 0.707 - - - - 0.768
11. sh3bgr ENSDARG00000021633 3498 3.236 0.942 0.878 - - - 0.715 - - 0.701 SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
12. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.221 0.933 - - - - 0.791 - 0.740 0.757 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
13. klhl41b ENSDARG00000006757 10762 3.188 0.944 - - 0.769 - 0.730 - - 0.745 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
14. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.183 0.827 0.894 - 0.722 - - - - 0.740 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
15. nexn ENSDARG00000057317 10972 3.179 0.939 - - 0.758 - 0.763 - - 0.719 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
16. ryr3 ENSDARG00000071331 6795 3.172 0.820 0.883 - - - 0.764 - 0.705 - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
17. hsp90aa1.1 ENSDARG00000010478 47784 3.135 0.794 - - 0.830 - 0.774 - 0.737 - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
18. myoz2b ENSDARG00000037266 2139 3.067 0.815 0.833 - 0.700 - 0.719 - - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
19. zgc:158296 ENSDARG00000070923 3935 3.063 - 0.844 - 0.739 - 0.780 - - 0.700 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
20. klhl31 ENSDARG00000039066 13656 2.996 0.705 - - 0.786 - - 0.726 - 0.779 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
21. pygma ENSDARG00000055518 15972 2.808 0.949 0.883 0.976 - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
22. hfe2 4113 2.8 0.947 0.907 - - - - 0.946 - - hemochromatosis type 2
23. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.649 0.951 0.918 - - 0.780 - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
24. myod1 ENSDARG00000030110 6019 2.644 0.907 0.940 - - - 0.797 - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
25. bves ENSDARG00000058548 2291 2.627 0.929 - - - - - 0.985 - 0.713 blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
26. fitm1 ENSDARG00000056464 1759 2.581 0.871 0.903 - - - 0.807 - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
27. FHOD3_1 FHOD3_1 983 2.563 0.893 0.868 - - - 0.802 - - -
28. actn3b ENSDARG00000001431 15747 2.559 0.964 0.885 - 0.710 - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
29. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.559 0.890 0.899 - 0.770 - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
30. srl ENSDARG00000104587 11126 2.551 0.905 0.940 - 0.706 - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
31. chrnd ENSDARG00000019342 2728 2.55 0.875 0.866 - 0.809 - - - - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
32. NRAP ENSDARG00000009341 3565 2.54 0.930 0.835 - - - 0.775 - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
33. pbxip1a ENSDARG00000071015 4960 2.509 0.896 0.896 - 0.717 - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
34. ptp4a3 ENSDARG00000039997 1964 2.505 0.781 0.772 - - - - 0.952 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
35. cacng1 cacng1 3118 2.504 0.879 0.903 - 0.722 - - - - -
36. znf106a ENSDARG00000016651 6049 2.491 0.886 0.865 - 0.740 - - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
37. asb5b ENSDARG00000053222 1207 2.488 0.901 0.833 - - - 0.754 - - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
38. synpo2lb ENSDARG00000078696 2361 2.488 0.904 0.859 - - - 0.725 - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
39. stac3 ENSDARG00000098883 1765 2.487 0.895 0.849 - - - 0.743 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
40. eef2l2 ENSDARG00000035256 6815 2.486 0.890 0.834 - - - - 0.762 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
41. smyd2b ENSDARG00000005629 8181 2.484 0.904 0.875 - - - 0.705 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
42. vbp1 ENSDARG00000030241 10619 2.474 0.807 0.901 - - - 0.766 - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
43. sucla2 ENSDARG00000005359 5992 2.468 0.848 0.788 - - - 0.832 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
44. cap2 ENSDARG00000104478 3266 2.463 0.912 0.822 - - - - - - 0.729 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
45. tnnt2c ENSDARG00000032242 28801 2.454 0.869 - 0.800 0.785 - - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
46. klhl40a ENSDARG00000039052 2537 2.453 0.846 0.899 - - - 0.708 - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
47. obsl1b ENSDARG00000077388 2511 2.452 0.813 0.869 - - - 0.770 - - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
48. smarcd3a ENSDARG00000038786 2894 2.449 - 0.828 - - 0.863 0.758 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
49. ptrfa ptrfa 4363 2.448 0.885 0.791 - - - 0.772 - - -
50. trim55a ENSDARG00000029596 2858 2.445 0.871 0.827 - - - - - - 0.747 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
51. TRIM63 TRIM63 1600 2.444 0.843 0.807 - - - 0.794 - - -
52. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.443 0.813 0.843 - - - 0.787 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
53. CR847973.1 ENSDARG00000115516 8754 2.442 0.886 0.783 - - - 0.773 - - -
54. kcnma1a ENSDARG00000079840 2584 2.442 0.900 0.834 - - - 0.708 - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
55. SYNPO2L SYNPO2L 6697 2.439 0.940 - - - - 0.779 - - 0.720
56. mir133b_1 671 2.417 0.825 0.793 - - - 0.799 - - - microRNA 133b
57. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.417 0.855 0.835 - - - 0.727 - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
58. mibp2 ENSDARG00000101844 17444 2.416 0.862 - - - - 0.805 0.749 - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
59. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 2.404 0.914 - - 0.775 - - - - 0.715 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
60. MYOM3 2720 2.4 0.852 0.835 - - - 0.713 - - - myomesin 3, transcript variant X2
61. SYNPO2 SYNPO2 7382 2.38 - - - 0.788 - 0.835 - - 0.757
62. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 2.372 0.873 0.795 - - - - - 0.704 - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
63. casq1b ENSDARG00000018105 2643 2.371 0.892 0.771 - - - - - - 0.708 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
64. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 2.37 0.881 0.763 - - - 0.726 - - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
65. psma8 ENSDARG00000010965 8321 2.363 - 0.783 - - - 0.793 0.787 - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
66. eif2s3 ENSDARG00000008292 17051 2.355 0.768 0.785 - - - - 0.802 - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
67. zgc:77086 ENSDARG00000014015 4908 2.349 0.729 - - - - 0.738 0.882 - - zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
68. vwde ENSDARG00000103443 5758 2.335 0.772 0.846 - - - 0.717 - - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
69. mtdhb ENSDARG00000004939 1225 2.331 0.808 0.795 - - - 0.728 - - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
70. tnnc1b ENSDARG00000037539 13945 2.325 - 0.871 - 0.742 - 0.712 - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
71. wu:fb17g07 wu:fb17g07 10567 2.319 0.725 0.810 - - - 0.784 - - -
72. mafa ENSDARG00000015890 2140 2.317 0.884 - - - - 0.709 - - 0.724 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
73. zgc:92113 1738 2.316 0.808 - - - - 0.798 - - 0.710 zgc:92113
74. smpx ENSDARG00000045302 2175 2.311 0.838 - - - - 0.740 - - 0.733 small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
75. aldh7a1 ENSDARG00000018426 4637 2.306 0.834 0.716 - - - 0.756 - - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
76. alg3 ENSDARG00000053155 1843 2.306 0.721 0.828 - - - 0.757 - - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
77. myoz2a ENSDARG00000012311 1373 2.296 0.797 0.790 - - - 0.709 - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
78. plxnb1a ENSDARG00000075821 1702 2.291 0.797 0.770 - - - 0.724 - - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
79. mef2d ENSDARG00000040237 6144 2.288 0.728 0.854 - - - 0.706 - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
80. atp5g1 51897 2.267 0.824 - - 0.734 - - - - 0.709 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
81. ATP5J_2 ATP5J_2 2381 2.261 0.725 0.777 - - - 0.759 - - -
82. tomm34 ENSDARG00000001557 1874 2.229 0.741 0.769 - 0.719 - - - - - translocase of outer mitochondrial membrane 34 [Source:ZFIN;Acc:ZDB-GENE-030131-2081]
83. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 2.227 - 0.773 - - - 0.736 - - 0.718 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
84. fgf13a ENSDARG00000035056 752 2.199 0.707 0.768 - - - 0.724 - - - fibroblast growth factor 13a [Source:ZFIN;Acc:ZDB-GENE-041114-101]
85. gcdh gcdh 1390 2.15 0.715 - - - - 0.709 - 0.726 -
86. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 1.906 - - 0.996 - - - 0.910 - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
87. cdca7a ENSDARG00000077620 9345 1.848 - - 0.973 - - - 0.875 - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
88. tomm7 ENSDARG00000067717 4452 1.843 - - - - 0.882 - 0.961 - - translocase of outer mitochondrial membrane 7 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060825-115]
89. murcb murcb 13655 1.838 0.959 - - - 0.879 - - - -
90. trdn ENSDARG00000041779 4283 1.838 0.914 0.924 - - - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
91. bc2 5213 1.829 - - 0.992 - - - 0.837 - - putative breast adenocarcinoma marker
92. C13H10orf71 3489 1.827 0.927 0.900 - - - - - - - chromosome 13 C10orf71 homolog
93. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 1.802 0.816 - 0.986 - - - - - -
94. arpp21 ENSDARG00000061081 892 1.798 0.909 0.889 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
95. slc1a3a ENSDARG00000104431 9888 1.798 - 0.804 0.994 - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
96. sptb ENSDARG00000030490 7128 1.788 0.894 0.894 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
97. mybpc2b ENSDARG00000021265 9618 1.786 0.923 0.863 - - - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
98. nop58 ENSDARG00000104353 8497 1.784 0.800 - 0.984 - - - - - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
99. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.78 - 0.807 0.973 - - - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
100. srpk3 ENSDARG00000005916 1546 1.779 0.886 0.893 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]

There are 1610 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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