Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smx5

Gene Name Gene ID Reads Annotation
smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]










Genes with expression patterns similar to smx5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
2. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 2.657 0.981 0.741 - - - - 0.935 - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
3. dek ENSDARG00000070108 2262 2.462 - - 0.877 - - - - 0.810 0.775 DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
4. dnm1l ENSDARG00000015006 1729 2.433 - 0.717 - - - - 0.964 0.752 - dynamin 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-1556]
5. cd99l2 ENSDARG00000056722 5036 2.267 - - 0.836 - 0.707 - - 0.724 - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
6. timm10b ENSDARG00000043898 1233 1.939 0.976 - - - - - 0.963 - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
7. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.937 0.985 - - - - - 0.952 - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
8. TMEM184B TMEM184B 1280 1.93 0.967 - - - - - 0.963 - -
9. BAHD1 ENSDARG00000086789 1194 1.927 0.974 - - - - - 0.953 - - bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
10. col6a1 ENSDARG00000074908 2339 1.916 0.972 - - - - - 0.944 - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
11. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.913 0.964 - 0.949 - - - - - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
12. wdr82 ENSDARG00000014083 3159 1.91 - - 0.952 - - - 0.958 - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
13. kansl3 ENSDARG00000029556 2487 1.908 - - 0.941 - - - 0.967 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
14. yy1b ENSDARG00000027978 2669 1.901 - - 0.934 - - - 0.967 - - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
15. gbas gbas 735 1.9 - - 0.933 - - - 0.967 - -
16. hnrpkl ENSDARG00000007034 4660 1.89 - - 0.923 - - - 0.967 - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
17. actr10 ENSDARG00000038432 1598 1.885 - - 0.930 - - - 0.955 - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
18. ube2e1 ENSDARG00000116649 10656 1.883 0.927 - - - - - 0.956 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
19. uqcrfs1 ENSDARG00000007745 4654 1.87 0.922 - - - - - 0.948 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
20. ubr2 ENSDARG00000070164 3960 1.87 - - 0.909 - - - 0.961 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
21. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.867 0.922 - - - - - 0.945 - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
22. wipi1 ENSDARG00000040657 2732 1.866 0.901 - - - - - 0.965 - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
23. fam50a ENSDARG00000024895 3020 1.865 0.940 - 0.925 - - - - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
24. si:ch211-114l13.11 si:ch211-114l13.11 4727 1.86 - - 0.918 - - - 0.942 - -
25. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 1.852 - - 0.878 - - - 0.974 - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
26. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.837 0.969 - - - - - 0.868 - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
27. ppp3r1a ENSDARG00000092659 9729 1.834 0.951 - - - - - 0.883 - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
28. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 1.83 0.882 - - - - - 0.948 - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
29. zgc:153372 ENSDARG00000068967 358 1.825 - - - 0.859 - - 0.966 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
30. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.824 0.959 - 0.865 - - - - - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
31. SNORD72 SNORD72 4018 1.808 0.973 - - - - - - 0.835 -
32. xpot ENSDARG00000099652 3026 1.804 0.980 0.824 - - - - - - - exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
33. PRODH2 PRODH2 1153 1.788 0.890 - - - - - 0.898 - -
34. uhrf1 ENSDARG00000103409 3282 1.787 - 0.817 - - - - 0.970 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
35. vrk1 ENSDARG00000018006 1759 1.782 - - 0.945 - - - - 0.837 - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
36. pcid2 ENSDARG00000013802 1596 1.776 - - - 0.803 - - 0.973 - - PCI domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041114-79]
37. dnajb9a ENSDARG00000052072 578 1.774 - - - 0.814 - - 0.960 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
38. wu:fj13e08 1223 1.76 0.979 - - - - - - 0.781 - wu:fj13e08
39. ppig ENSDARG00000044431 3427 1.753 0.953 - - - - - - 0.800 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
40. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.751 - - - - - - 0.964 0.787 - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
41. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.746 0.835 - 0.911 - - - - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
42. aldocb ENSDARG00000019702 2111 1.745 0.968 - - - - - - 0.777 - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
43. CABZ01084579.1 CABZ01084579.1 7181 1.743 - - 0.838 - - - 0.905 - -
44. CABZ01088039.1 CABZ01088039.1 2482 1.743 - - 0.895 - - - 0.848 - -
45. pelo ENSDARG00000055477 1927 1.742 0.948 - - 0.794 - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
46. cdc14b ENSDARG00000021483 4958 1.737 - - - - - 0.763 0.974 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
47. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 1.727 - - - - - - 0.956 0.771 - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
48. polb ENSDARG00000003749 2049 1.724 - 0.772 0.952 - - - - - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
49. PSD PSD 367 1.719 - - - 0.763 - - 0.956 - -
50. wu:fc51f04 wu:fc51f04 7074 1.716 0.907 - - - - - 0.809 - -
51. plekhh1 ENSDARG00000053835 2123 1.713 - - - - - - 0.966 0.747 - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
52. CABZ01072954.1 CABZ01072954.1 2330 1.71 - - 0.930 - - - - 0.780 -
53. pfkfb3 ENSDARG00000001953 656 1.709 0.980 - - 0.729 - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2724]
54. idh3g ENSDARG00000023648 4877 1.707 - 0.782 - - - - 0.925 - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
55. cadm1a ENSDARG00000031075 2484 1.707 - - - - - - 0.942 0.765 - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
56. rabggtb ENSDARG00000068587 1935 1.707 - - - - - - 0.959 0.748 - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
57. atp5mf ENSDARG00000037867 11052 1.702 0.850 0.852 - - - - - - - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
58. ptgesl ENSDARG00000068415, ENSDARG00000110236 1718 1.697 - - - - - - 0.954 0.743 - prostaglandin E synthase 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-1063]
59. si:ch211-196l7.4 ENSDARG00000095451 3766 1.697 - - - - - 0.743 0.954 - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
60. arpc4l ENSDARG00000058225 10107 1.695 0.840 - - - - - 0.855 - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
61. arid2 ENSDARG00000007413 4413 1.694 - - 0.910 - - - - 0.784 - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
62. creb3l1 ENSDARG00000015793 1988 1.69 - - - 0.751 - - 0.939 - - cAMP responsive element binding protein 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-030219-181]
63. sp1 ENSDARG00000088347 1697 1.69 - - - - - - 0.940 0.750 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
64. greb1l ENSDARG00000039196 2085 1.686 - 0.743 0.943 - - - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
65. onecutl ENSDARG00000040253 2143 1.685 - - 0.909 - - - - 0.776 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
66. xylt1 ENSDARG00000061248 2357 1.678 - - 0.936 - - - - 0.742 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
67. si:dkey-82i20.5 ENSDARG00000116717 2965 1.678 - 0.707 - - - - 0.971 - - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
68. f2rl1.2 ENSDARG00000077540 822 1.676 - - 0.929 0.747 - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
69. pank1b ENSDARG00000010098 3202 1.675 - - 0.936 - - - - 0.739 - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
70. zgc:66014 817 1.675 - - - - - 0.712 0.963 - - zgc:66014, transcript variant X6
71. hmgcrb ENSDARG00000105206 2080 1.674 - 0.747 0.927 - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
72. zgc:153675 ENSDARG00000071555 3769 1.673 0.832 0.841 - - - - - - - zgc:153675 [Source:ZFIN;Acc:ZDB-GENE-061013-567]
73. psmd7 ENSDARG00000102417 4732 1.673 - - - - 0.711 - 0.962 - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
74. rhogc ENSDARG00000028401 2671 1.672 - - 0.938 - - - - - 0.734 ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
75. ptch2 ENSDARG00000055026 980 1.665 - - - 0.875 - - - 0.790 - patched 2 [Source:ZFIN;Acc:ZDB-GENE-980526-44]
76. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.665 - - 0.885 - - - - 0.780 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
77. tm2d3 ENSDARG00000076618 2310 1.663 - 0.714 0.949 - - - - - - TM2 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070620-20]
78. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.663 0.954 - - - - - - 0.709 - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
79. cdc42ep1b ENSDARG00000077792 1569 1.662 - 0.707 - - - - 0.955 - - CDC42 effector protein (Rho GTPase binding) 1b [Source:ZFIN;Acc:ZDB-GENE-120215-219]
80. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.661 - 0.767 0.894 - - - - - - translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
81. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.66 - - - - - - 0.941 0.719 - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
82. cdca5 ENSDARG00000044437 2041 1.654 - 0.750 0.904 - - - - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
83. acbd3 ENSDARG00000042623 2643 1.653 - 0.758 - - - - 0.895 - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
84. prpf39 ENSDARG00000100209 3721 1.649 - - - - - 0.700 0.949 - - PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
85. med27 ENSDARG00000009681 1857 1.646 - - - - - - 0.942 - 0.704 mediator complex subunit 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1601]
86. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.644 0.847 - 0.797 - - - - - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
87. znf706 ENSDARG00000056307 12518 1.643 0.911 - - - - - - 0.732 - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
88. cnih cnih 8292 1.642 - - - - - - 0.840 0.802 -
89. zfr2 ENSDARG00000071683 780 1.635 - 0.788 - 0.847 - - - - - zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
90. pfdn4 ENSDARG00000061228 8266 1.632 0.932 - - - - - - 0.700 - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
91. SLC6A13 ENSDARG00000067567 1617 1.619 - 0.790 - - - - 0.829 - - solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
92. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.614 - 0.807 - - - - - 0.807 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
93. si:ch211-51e12.7 ENSDARG00000045914 9598 1.609 - - 0.851 - - 0.758 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
94. tox ENSDARG00000032317 9126 1.608 - - 0.842 - - - - 0.766 - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
95. srsf5b ENSDARG00000027734 6996 1.6 - - - - - - 0.900 0.700 - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
96. cbx3a ENSDARG00000003860 4922 1.599 - - 0.830 - - - - 0.769 - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
97. ndufb7 ENSDARG00000033789 5898 1.59 - - - 0.837 - - 0.753 - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
98. smarca5 ENSDARG00000052348 15433 1.585 0.875 0.710 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
99. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.582 - - 0.860 - - - - - 0.722 high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
100. prpf4bb ENSDARG00000040310 2260 1.574 - 0.771 - - - - - 0.803 - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]

There are 1642 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA