Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sms

Gene Name Gene ID Reads Annotation
sms ENSDARG00000008155 1192 spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]










Genes with expression patterns similar to sms

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sms ENSDARG00000008155 1192 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
2. chrna1 ENSDARG00000009021 2931 3.163 0.839 0.802 - - - 0.715 0.807 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
3. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 3.01 0.732 0.725 - - - 0.823 0.730 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
4. myoz2a ENSDARG00000012311 1373 2.475 0.746 0.838 - - - - 0.891 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
5. MYOM3 2720 2.469 0.731 0.877 - - - - 0.861 - - myomesin 3, transcript variant X2
6. C13H10orf71 3489 2.432 0.745 0.861 - - - - 0.826 - - chromosome 13 C10orf71 homolog
7. tcf7l1b ENSDARG00000007369 2785 2.381 - 0.807 - - - 0.871 0.703 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
8. hapln1a ENSDARG00000089769 12334 2.371 0.732 0.888 - - - - 0.751 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
9. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 2.365 - 0.848 - - - 0.802 0.715 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
10. nars ENSDARG00000061100 2948 2.363 0.756 0.809 - - - - 0.798 - - asparaginyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-1016]
11. si:ch211-242b18.1 ENSDARG00000054723 2929 2.361 0.864 0.777 - - - - 0.720 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
12. MYOT ENSDARG00000076312 1791 2.346 0.767 0.813 - - - - 0.766 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
13. vwde ENSDARG00000103443 5758 2.333 0.811 0.731 - - - - 0.791 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
14. fitm1 ENSDARG00000056464 1759 2.331 0.758 0.785 - - - - 0.788 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
15. six2b ENSDARG00000054878 567 2.33 0.779 0.780 - - - - 0.771 - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
16. si:ch211-197l9.2 ENSDARG00000078244 655 2.33 0.807 0.763 - - - - 0.760 - - si:ch211-197l9.2 [Source:ZFIN;Acc:ZDB-GENE-091204-369]
17. pbxip1a ENSDARG00000071015 4960 2.321 0.708 0.760 - - - - 0.853 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
18. ank3b ENSDARG00000077582, ENSDARG00000110151 831 2.311 - 0.723 - - - 0.782 0.806 - - ankyrin 3b [Source:ZFIN;Acc:ZDB-GENE-060621-2]
19. sptb ENSDARG00000030490 7128 2.308 0.723 0.767 - - - - 0.818 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
20. TMPO TMPO 3264 2.303 0.783 0.716 - - - - 0.804 - -
21. myod1 ENSDARG00000030110 6019 2.284 0.805 - - - - 0.725 0.754 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
22. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.283 0.761 0.791 - - - - 0.731 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
23. klhl41b ENSDARG00000006757 10762 2.273 0.760 - - - - 0.707 0.806 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
24. CR388002.1 CR388002.1 1998 2.27 0.801 0.761 - - - - 0.708 - -
25. xirp2a ENSDARG00000071113 7113 2.265 0.716 0.756 - - - - 0.793 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
26. txn2 ENSDARG00000034777 4071 2.265 - 0.731 - - - - 0.770 0.764 - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
27. dyrk2 ENSDARG00000094646 2163 2.26 - 0.733 - 0.707 - - 0.820 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
28. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 2.252 - 0.828 - 0.719 - - - 0.705 - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
29. pygma ENSDARG00000055518 15972 2.233 0.749 0.717 - - - - 0.767 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
30. txlnbb ENSDARG00000076241 6396 2.206 0.729 0.729 - - - - 0.748 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
31. mrps9 ENSDARG00000061505 1636 2.205 - 0.729 - - - 0.714 0.762 - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
32. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 2.204 0.707 0.723 - - - - 0.774 - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
33. mybpc2b ENSDARG00000021265 9618 2.196 0.722 0.722 - - - - 0.752 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
34. smarcd3a ENSDARG00000038786 2894 2.196 0.752 0.732 - - - - 0.712 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
35. NRAP ENSDARG00000009341 3565 2.173 0.701 0.713 - - - - 0.759 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
36. ITGB1BP2 ENSDARG00000030176 2472 2.166 - 0.709 - - - 0.720 0.737 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
37. lin7a ENSDARG00000013414 1589 2.135 - 0.709 - - - 0.717 0.709 - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
38. gypc ENSDARG00000041546 1487 2.123 0.706 0.701 - - - - 0.716 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
39. CU633479.5 ENSDARG00000114818 1815 1.72 - 0.872 - - - - 0.848 - -
40. snrnp70 ENSDARG00000077126 5921 1.714 - 0.858 - - - 0.856 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
41. hspb7 ENSDARG00000104441 1417 1.706 - 0.804 - - - - 0.902 - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
42. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.696 - 0.845 - - - - 0.851 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
43. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.684 - 0.859 - - - - 0.825 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
44. si:dkey-65j6.2 ENSDARG00000103586 533 1.684 - 0.744 - - - - 0.940 - - si:dkey-65j6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-319]
45. six1b ENSDARG00000026473 1908 1.681 - 0.843 - - - - 0.838 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
46. cacng1 cacng1 3118 1.681 - 0.860 - - - - 0.821 - -
47. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 1.675 - 0.854 - - - - 0.821 - - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
48. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 1.673 - 0.815 - - - - 0.858 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
49. tmsb ENSDARG00000054911 6411 1.671 - 0.814 - - - 0.857 - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
50. MSS51 ENSDARG00000075463 428 1.663 - 0.798 - - - - 0.865 - - MSS51 mitochondrial translational activator [Source:ZFIN;Acc:ZDB-GENE-130530-775]
51. scn4ba ENSDARG00000099031 1634 1.659 - - - - - 0.805 0.854 - - sodium channel, voltage-gated, type IV, beta a [Source:ZFIN;Acc:ZDB-GENE-070615-18]
52. hdac9b ENSDARG00000056642 1148 1.653 - 0.773 - - - - 0.880 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
53. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.652 0.779 - - - - - 0.873 - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
54. alpk3a ENSDARG00000078989 1992 1.652 - 0.777 - - - - 0.875 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
55. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.651 - 0.863 - - - - 0.788 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
56. tamm41 ENSDARG00000100157 1116 1.65 0.754 - - - - - 0.896 - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
57. ntmt1 ENSDARG00000022399 5779 1.648 - 0.822 - - - - 0.826 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
58. timm8b ENSDARG00000055708 7291 1.642 - 0.824 - - - - 0.818 - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
59. tnnc1b ENSDARG00000037539 13945 1.639 - 0.767 - - - - 0.872 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
60. EHBP1L1 EHBP1L1 2500 1.635 0.799 - - - - - 0.836 - -
61. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 1.634 0.774 - - - - 0.860 - - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
62. gipc1 ENSDARG00000104483 2913 1.631 - 0.792 - - - 0.839 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
63. mt-atp8 ENSDARG00000063910 1376 1.625 - - - - - 0.792 0.833 - - ATP synthase 8, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-19]
64. HECW1 HECW1 1531 1.625 - 0.769 - - - 0.856 - - -
65. si:ch211-89o9.4 ENSDARG00000093237 153 1.621 - 0.704 - - - - 0.917 - - si:ch211-89o9.4 [Source:ZFIN;Acc:ZDB-GENE-090313-134]
66. limch1a ENSDARG00000074275 2981 1.617 - 0.761 - - - - 0.856 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
67. tenm3 ENSDARG00000005479 3799 1.616 - 0.898 - - - 0.718 - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
68. hfe2 4113 1.615 0.743 0.872 - - - - - - - hemochromatosis type 2
69. PTGES3L PTGES3L 4801 1.612 0.797 - - - - - 0.815 - -
70. obsl1b ENSDARG00000077388 2511 1.606 0.725 - - - - - 0.881 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
71. hccsa hccsa 869 1.605 0.807 - - - - - 0.798 - -
72. asb2a asb2a 845 1.605 - 0.841 - - - - 0.764 - -
73. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.6 - 0.851 - - - 0.749 - - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
74. efemp2a ENSDARG00000094324 39261 1.596 0.741 - - - - - 0.855 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
75. MYOM1 MYOM1 3870 1.596 - 0.819 - - - - 0.777 - -
76. myoz2b ENSDARG00000037266 2139 1.596 - 0.708 - - - - 0.888 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
77. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.594 - 0.845 - - - 0.749 - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
78. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 1.592 - - - - - 0.853 0.739 - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
79. rp42-pen rp42-pen 3395 1.591 - 0.795 - - - - 0.796 - -
80. CABZ01086825.1 CABZ01086825.1 573 1.59 - 0.726 - - - - 0.864 - -
81. ryr1b ENSDARG00000023797 5693 1.588 - 0.810 - - - - 0.778 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
82. ryr3 ENSDARG00000071331 6795 1.587 - 0.776 - - - - 0.811 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
83. COX18 ENSDARG00000102463 602 1.587 - 0.787 - - - - 0.800 - - cytochrome c oxidase assembly factor COX18 [Source:ZFIN;Acc:ZDB-GENE-080204-88]
84. nmrk2 ENSDARG00000067848 10293 1.585 - 0.737 - - - - 0.848 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
85. parvb ENSDARG00000019117 1042 1.583 0.801 - - - - - 0.782 - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
86. dhrs7c dhrs7c 1173 1.581 - - - - - - 0.847 0.734 -
87. tmem47 ENSDARG00000057322 4691 1.58 - - - - - 0.847 0.733 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
88. si:ch211-156j16.1 ENSDARG00000092035 7441 1.578 0.799 - - - - - 0.779 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
89. MRPL21 ENSDARG00000003846 3244 1.576 0.731 0.845 - - - - - - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
90. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.576 - 0.780 - - - - 0.796 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
91. tmem182 tmem182 12589 1.575 - - - - - 0.771 0.804 - -
92. vgll2b ENSDARG00000053773 444 1.574 - - - - - 0.712 0.862 - - vestigial-like family member 2b [Source:ZFIN;Acc:ZDB-GENE-050809-113]
93. ccnh ENSDARG00000007657 745 1.572 - - - 0.719 - 0.853 - - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
94. klhl21 ENSDARG00000039255 2550 1.571 - 0.813 - - - - 0.758 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
95. CU302436.1 ENSDARG00000114500 1619 1.57 - 0.762 - - - - 0.808 - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
96. wdr43 ENSDARG00000077264 1992 1.567 0.774 0.793 - - - - - - - WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
97. arpp21 ENSDARG00000061081 892 1.566 0.721 0.845 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
98. ccdc85b ENSDARG00000061543 1309 1.562 - 0.730 - - - 0.832 - - - coiled-coil domain containing 85B [Source:ZFIN;Acc:ZDB-GENE-060130-56]
99. ahsa1 ahsa1 2012 1.561 0.805 - - - - - 0.756 - -
100. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 1.561 - 0.827 - - - - 0.734 - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]

There are 1916 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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