Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smpd3

Gene Name Gene ID Reads Annotation
smpd3 ENSDARG00000098226 1 sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]










Genes with expression patterns similar to smpd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. GMEB2 ENSDARG00000093240 6 2 1.000 - 1.000 - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
2. smpd3 ENSDARG00000098226 1 2 1.000 - 1.000 - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
3. bmpr2b ENSDARG00000020057 8 1.777 1.000 - 0.777 - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
4. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.732 1.000 - 0.732 - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
5. edn1 ENSDARG00000036912 74 1 1.000 - - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
6. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 1.000 - - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
7. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
8. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - 1.000 - - - - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
9. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
10. HIST1H4J_4 HIST1H4J_4 9 1 1.000 - - - - - - - -
11. tdrd9 ENSDARG00000013453 22 1 - - 1.000 - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
12. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
13. FP236168.1 FP236168.1 150 1 1.000 - - - - - - - -
14. BX323854.3 BX323854.3 62 1 1.000 - - - - - - - -
15. arl8 ENSDARG00000094709 6 1 1.000 - - - - - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
16. ppid_1 ENSDARG00000038835 4 1 1.000 - - - - - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
17. ednrb1b ednrb1b 0 1 - - 1.000 - - - - - -
18. AL807829.1 AL807829.1 2 1 1.000 - - - - - - - -
19. CABZ01058371.1 CABZ01058371.1 23 1 - - 1.000 - - - - - -
20. wu:fy63c09 1 1 1.000 - - - - - - - - wu:fy63c09
21. si:ch211-170d12.2 si:ch211-170d12.2 1 1 1.000 - - - - - - - -
22. si:ch1073-15f19.2 ENSDARG00000095640 4 1 1.000 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
23. cx34.5 ENSDARG00000069411 3 1 1.000 - - - - - - - - connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
24. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
25. CABZ01032454.1 CABZ01032454.1 7 1 - - 1.000 - - - - - -
26. N4BP3 ENSDARG00000060007 0 1 - - 1.000 - - - - - - NEDD4 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-141216-2]
27. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
28. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 1.000 - - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
29. plekha7a ENSDARG00000060813 179 1 1.000 - - - - - - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
30. CU695076.1 CU695076.1 7 1 1.000 - - - - - - - -
31. CU984579.1 ENSDARG00000116863 15 1 1.000 - - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
32. si:ch211-117m22.2 si:ch211-117m22.2 60 1 1.000 - - - - - - - -
33. Metazoa_SRP_23 Metazoa_SRP_23 3 1 1.000 - - - - - - - -
34. myo15aa ENSDARG00000075292 29 1 1.000 - - - - - - - - myosin XVAa [Source:ZFIN;Acc:ZDB-GENE-080425-2]
35. KAZN_1 KAZN_1 13 1 1.000 - - - - - - - -
36. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 1 - - 1.000 - - - - - -
37. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 1.000 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
38. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - 1.000 - - - - - -
39. itga2.2 ENSDARG00000062974 27 1 1.000 - - - - - - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
40. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -
41. UNC5CL UNC5CL 4 1 - - 1.000 - - - - - -
42. ANKS1A ANKS1A 138 1 1.000 - - - - - - - -
43. adarb2 ENSDARG00000071823 1 1 - - 1.000 - - - - - - adenosine deaminase, RNA-specific, B2 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-060503-160]
44. ddx26b 79 1 1.000 - - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
45. mettl21a ENSDARG00000012051 86 1 1.000 - - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
46. adck3 83 1 1.000 - - - - - - - - aarF domain containing kinase 3
47. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
48. HTRA2_7 HTRA2_7 1 1 - - 1.000 - - - - - -
49. gcdhl gcdhl 38 1 - - 1.000 - - - - - -
50. slc30a2 ENSDARG00000021305 4 1 - - 1.000 - - - - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
51. si:ch211-187f22.2 si:ch211-187f22.2 7 1 - - 1.000 - - - - - -
52. BX119910.6 BX119910.6 11 1 1.000 - - - - - - - -
53. si:dkey-117p18.2 si:dkey-117p18.2 104 1 1.000 - - - - - - - -
54. rln3a ENSDARG00000070780 2 1 - - 1.000 - - - - - - relaxin 3a [Source:ZFIN;Acc:ZDB-GENE-050310-3]
55. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 1 1.000 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
56. FAM150A 14 1 1.000 - - - - - - - - family with sequence similarity 150 member A, transcript variant X2
57. si:ch211-13o20.1 si:ch211-13o20.1 30 1 1.000 - - - - - - - -
58. loxhd1b ENSDARG00000074638 6 1 1.000 - - - - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
59. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - 1.000 - - - - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
60. fkrp ENSDARG00000100467 0 1 - - 1.000 - - - - - - fukutin related protein [Source:ZFIN;Acc:ZDB-GENE-070412-4]
61. si:dkey-217m5.3 si:dkey-217m5.3 22 1 1.000 - - - - - - - -
62. ZBTB40 ENSDARG00000091762 57 1 1.000 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
63. hoxc9a ENSDARG00000092809 18 1 1.000 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
64. si:dkey-230i18.1 si:dkey-230i18.1 3 1 1.000 - - - - - - - -
65. dcun1d5 ENSDARG00000100363 3 1 1.000 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
66. CABZ01079304.1 CABZ01079304.1 7 1 1.000 - - - - - - - -
67. OSBP2 ENSDARG00000053487 15 1 1.000 - - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
68. gp1bb ENSDARG00000074441 116 1 1.000 - - - - - - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
69. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - 1.000 - - - - - - tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
70. erc1a ENSDARG00000009941, ENSDARG00000110965 7 1 1.000 - - - - - - - - ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
71. si:dkey-117k10.8 si:dkey-117k10.8 17 1 1.000 - - - - - - - -
72. BX088551.1 BX088551.1 0 1 - - 1.000 - - - - - -
73. Metazoa_SRP_2 Metazoa_SRP_2 2 1 1.000 - - - - - - - -
74. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
75. pdcb ENSDARG00000017634 10 1 - - 1.000 - - - - - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
76. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
77. ucp3 ENSDARG00000091209 137 1 1.000 - - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
78. wu:fj39g12 ENSDARG00000043460 8 1 - - 1.000 - - - - - - wu:fj39g12 [Source:ZFIN;Acc:ZDB-GENE-030131-7901]
79. ano6 ENSDARG00000061544 21 1 1.000 - - - - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
80. BX000701.3 BX000701.3 4 1 1.000 - - - - - - - -
81. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - 1.000 - - - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
82. mrc1b ENSDARG00000038822 73 1 1.000 - - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
83. RNF14 ENSDARG00000043905 41 1 1.000 - - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
84. ssh1b ENSDARG00000010031 4 1 1.000 - - - - - - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
85. dnah7l dnah7l 2 1 - - 1.000 - - - - - -
86. cx45.6 cx45.6 26 1 1.000 - - - - - - - -
87. TMEM221 TMEM221 62 1 1.000 - - - - - - - -
88. ano2 ENSDARG00000101363 50 1 1.000 - - - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
89. ovca2 ENSDARG00000103748 38 1 1.000 - - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
90. CU694952.2 CU694952.2 3 1 - - 1.000 - - - - - -
91. COBLL1 COBLL1 14 1 1.000 - - - - - - - -
92. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
93. zgc:92658 8 1 1.000 - - - - - - - - zgc:92658
94. si:dkey-267i17.3 si:dkey-267i17.3 4 1 1.000 - - - - - - - -
95. fermt3a fermt3a 56 1 1.000 - - - - - - - -
96. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1 1.000 - - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
97. crtac1a ENSDARG00000059826 22 1 1.000 - - - - - - - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
98. timd4 ENSDARG00000077257 4 1 - - 1.000 - - - - - - T cell immunoglobulin and mucin domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-080303-10]
99. ZBED1 ZBED1 2 1 - - 1.000 - - - - - -
100. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]

There are 312 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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