Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smpd3

Gene Name Gene ID Reads Annotation
smpd3 ENSDARG00000098226 1 sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]










Genes with expression patterns similar to smpd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. GMEB2 ENSDARG00000093240 6 2 1.000 - 1.000 - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
2. smpd3 ENSDARG00000098226 1 2 1.000 - 1.000 - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
3. bmpr2b ENSDARG00000020057 8 1.777 1.000 - 0.777 - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
4. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.732 1.000 - 0.732 - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
5. si:ch211-187f22.2 si:ch211-187f22.2 7 1 - - 1.000 - - - - - -
6. AL807829.1 AL807829.1 2 1 1.000 - - - - - - - -
7. HTRA2_7 HTRA2_7 1 1 - - 1.000 - - - - - -
8. si:rp71-36n21.1 93 1 - - 1.000 - - - - - - si:rp71-36n21.1
9. dnah7l dnah7l 2 1 - - 1.000 - - - - - -
10. si:dkey-14a7.6 si:dkey-14a7.6 0 1 - - 1.000 - - - - - -
11. si:ch211-210h11.7 si:ch211-210h11.7 32 1 1.000 - - - - - - - -
12. muc13b ENSDARG00000079647 67 1 1.000 - - - - - - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
13. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - 1.000 - - - - - -
14. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 1.000 - - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
15. ANKS1A ANKS1A 138 1 1.000 - - - - - - - -
16. si:ch1073-160m15.1 si:ch1073-160m15.1 74 1 1.000 - - - - - - - -
17. ednrb1b ednrb1b 0 1 - - 1.000 - - - - - -
18. si:ch211-245n8.2 si:ch211-245n8.2 0 1 - - 1.000 - - - - - -
19. tmem86a ENSDARG00000044034 1 1 - - 1.000 - - - - - - transmembrane protein 86A [Source:ZFIN;Acc:ZDB-GENE-050320-81]
20. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1 - - 1.000 - - - - - - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
21. abhd10a ENSDARG00000076435 3 1 1.000 - - - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
22. mettl21a ENSDARG00000012051 86 1 1.000 - - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
23. SNORD89 SNORD89 1 1 1.000 - - - - - - - -
24. si:ch73-381f5.2 ENSDARG00000092723 1 1 1.000 - - - - - - - - si:ch73-381f5.2 [Source:ZFIN;Acc:ZDB-GENE-090311-25]
25. si:dkey-267i17.3 si:dkey-267i17.3 4 1 1.000 - - - - - - - -
26. ciita ENSDARG00000090851 5 1 1.000 - - - - - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
27. ENSDARG00000088389 ENSDARG00000088389 2 1 - - 1.000 - - - - - -
28. ifit2 ifit2 11 1 1.000 - - - - - - - -
29. asic2 ENSDARG00000006849 18 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
30. si:ch73-299h12.1 ENSDARG00000102321 233 1 1.000 - - - - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
31. BX088525.2 ENSDARG00000117222 11 1 1.000 - - - - - - - -
32. fermt3a fermt3a 56 1 1.000 - - - - - - - -
33. aqp3b ENSDARG00000069518 80 1 1.000 - - - - - - - - aquaporin 3b [Source:ZFIN;Acc:ZDB-GENE-040724-66]
34. CABZ01032454.1 CABZ01032454.1 7 1 - - 1.000 - - - - - -
35. ovca2 ENSDARG00000103748 38 1 1.000 - - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
36. edn1 ENSDARG00000036912 74 1 1.000 - - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
37. gaa ENSDARG00000090714 19 1 1.000 - - - - - - - - glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II) [Source:ZFIN;Acc:ZDB-GENE-070212-2]
38. si:ch211-10p21.1 si:ch211-10p21.1 6 1 1.000 - - - - - - - -
39. rftn1a ENSDARG00000070831 5 1 1.000 - - - - - - - - raftlin, lipid raft linker 1a [Source:ZFIN;Acc:ZDB-GENE-060503-293]
40. olfcs2 ENSDARG00000100451 1 1 1.000 - - - - - - - - olfactory receptor C family, s2 [Source:ZFIN;Acc:ZDB-GENE-060503-238]
41. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
42. zap70 ENSDARG00000015752 1 1 1.000 - - - - - - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
43. celsr3 ENSDARG00000055825 1 1 - - 1.000 - - - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
44. CU694374.3 CU694374.3 28 1 1.000 - - - - - - - -
45. cdc14aa ENSDARG00000013858 18 1 1.000 - - - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
46. adam10b ENSDARG00000015502 26 1 1.000 - - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
47. HIST1H4J_4 HIST1H4J_4 9 1 1.000 - - - - - - - -
48. CCDC134_1 CCDC134_1 200 1 1.000 - - - - - - - -
49. CABZ01006254.1 CABZ01006254.1 95 1 1.000 - - - - - - - -
50. efna5b ENSDARG00000098625 1 1 - - 1.000 - - - - - - ephrin-A5b [Source:ZFIN;Acc:ZDB-GENE-980526-186]
51. ano2 ENSDARG00000101363 50 1 1.000 - - - - - - - - anoctamin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-62]
52. ZNF135_1 ZNF135_1 1 1 - - 1.000 - - - - - -
53. dcun1d5 ENSDARG00000100363 3 1 1.000 - - - - - - - - DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2603]
54. tdrd9 ENSDARG00000013453 22 1 - - 1.000 - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
55. sele ENSDARG00000009123 122 1 1.000 - - - - - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
56. cyp7a1a cyp7a1a 1 1 - - 1.000 - - - - - -
57. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 1 1.000 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
58. N4BP3 ENSDARG00000060007 0 1 - - 1.000 - - - - - - NEDD4 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-141216-2]
59. GRIN3B GRIN3B 16 1 1.000 - - - - - - - -
60. arl11l arl11l 31 1 1.000 - - - - - - - -
61. ENSDARG00000063362 ENSDARG00000063362 0 1 - - 1.000 - - - - - -
62. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - 1.000 - - - - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
63. zp2.5 ENSDARG00000086522 15 1 1.000 - - - - - - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
64. Metazoa_SRP_24 Metazoa_SRP_24 4 1 1.000 - - - - - - - -
65. sycp1 ENSDARG00000003904 8 1 1.000 - - - - - - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
66. vipr1b ENSDARG00000059058 62 1 1.000 - - - - - - - - vasoactive intestinal peptide receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050311-6]
67. plcb4 1 1 - - 1.000 - - - - - - phospholipase C, beta 4
68. CABZ01058371.1 CABZ01058371.1 23 1 - - 1.000 - - - - - -
69. ZBTB40 ENSDARG00000091762 57 1 1.000 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
70. rtn4rl2a ENSDARG00000052012 5 1 - - 1.000 - - - - - - reticulon 4 receptor-like 2 a [Source:ZFIN;Acc:ZDB-GENE-040310-4]
71. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1 1.000 - - - - - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
72. CU695076.1 CU695076.1 7 1 1.000 - - - - - - - -
73. fbxo36b ENSDARG00000039152 7 1 - - 1.000 - - - - - - F-box protein 36b [Source:ZFIN;Acc:ZDB-GENE-060825-271]
74. ZBED1 ZBED1 2 1 - - 1.000 - - - - - -
75. si:ch211-113a14.29_2 0 1 - - 1.000 - - - - - - si:ch211-113a14.29
76. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - 1.000 - - - - - -
77. irgq2 ENSDARG00000068657 4 1 1.000 - - - - - - - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
78. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
79. CU694952.2 CU694952.2 3 1 - - 1.000 - - - - - -
80. CABZ01080492.1 CABZ01080492.1 495 1 1.000 - - - - - - - -
81. CABZ01085054.1 CABZ01085054.1 20 1 1.000 - - - - - - - -
82. si:dkey-246e3.4 ENSDARG00000086390 50 1 - - 1.000 - - - - - - si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
83. si:dkey-117p18.2 si:dkey-117p18.2 104 1 1.000 - - - - - - - -
84. slc10a4 ENSDARG00000009131 51 1 1.000 - - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
85. Metazoa_SRP_2 Metazoa_SRP_2 2 1 1.000 - - - - - - - -
86. CA4 CA4 1 1 - - 1.000 - - - - - -
87. BX323064.1 ENSDARG00000099914 11 1 1.000 - - - - - - - -
88. cacnb2a ENSDARG00000099045 374 1 1.000 - - - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
89. si:dkey-187i8.2 ENSDARG00000096624 8 1 - - 1.000 - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
90. si:dkey-21n8.3 si:dkey-21n8.3 5 1 1.000 - - - - - - - -
91. KAZN_1 KAZN_1 13 1 1.000 - - - - - - - -
92. CABZ01078481.1 CABZ01078481.1 6 1 1.000 - - - - - - - -
93. ZBED1_5 ZBED1_5 1 1 1.000 - - - - - - - -
94. cyp4f3 ENSDARG00000053530 10 1 1.000 - - - - - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
95. COBLL1 COBLL1 14 1 1.000 - - - - - - - -
96. gpr155a ENSDARG00000090804 27 1 1.000 - - - - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
97. ttc22 ENSDARG00000077836 21 1 1.000 - - - - - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
98. PLEKHS1 ENSDARG00000079227 7 1 1.000 - - - - - - - - pleckstrin homology domain containing, family S member 1 [Source:ZFIN;Acc:ZDB-GENE-080204-50]
99. TMEM221 TMEM221 62 1 1.000 - - - - - - - -
100. si:dkey-117k10.8 si:dkey-117k10.8 17 1 1.000 - - - - - - - -

There are 312 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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