Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smpd3

Gene Name Gene ID Reads Annotation
smpd3 ENSDARG00000098226 1 sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]










Genes with expression patterns similar to smpd3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smpd3 ENSDARG00000098226 1 2 1.000 - 1.000 - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
2. GMEB2 ENSDARG00000093240 6 2 1.000 - 1.000 - - - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
3. bmpr2b ENSDARG00000020057 8 1.777 1.000 - 0.777 - - - - - - bone morphogenetic protein receptor, type II b (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-2]
4. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1.732 1.000 - 0.732 - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
5. hoxc9a ENSDARG00000092809 18 1 1.000 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
6. 5S_rRNA_10 5S_rRNA_10 2 1 1.000 - - - - - - - -
7. GRIN3B GRIN3B 16 1 1.000 - - - - - - - -
8. CABZ01079304.1 CABZ01079304.1 7 1 1.000 - - - - - - - -
9. mettl21a ENSDARG00000012051 86 1 1.000 - - - - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
10. frmd4bb ENSDARG00000076496 18 1 - - 1.000 - - - - - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
11. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
12. zgc:92658 8 1 1.000 - - - - - - - - zgc:92658
13. CU694385.1 CU694385.1 1 1 1.000 - - - - - - - -
14. csrnp1b ENSDARG00000038429 10 1 1.000 - - - - - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
15. gcdhl gcdhl 38 1 - - 1.000 - - - - - -
16. tectb ENSDARG00000045268 3 1 - - 1.000 - - - - - - tectorin beta [Source:ZFIN;Acc:ZDB-GENE-041212-16]
17. OSBP2 ENSDARG00000053487 15 1 1.000 - - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
18. cysltr1 ENSDARG00000058246, ENSDARG00000116295 25 1 1.000 - - - - - - - - cysteinyl leukotriene receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-250]
19. hs3st4 ENSDARG00000052648 6 1 - - 1.000 - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
20. ucp3 ENSDARG00000091209 137 1 1.000 - - - - - - - - uncoupling protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1317]
21. cyp7a1a cyp7a1a 1 1 - - 1.000 - - - - - -
22. si:dkeyp-82d1.2 si:dkeyp-82d1.2 11 1 1.000 - - - - - - - -
23. ZBTB40 ENSDARG00000091762 57 1 1.000 - - - - - - - - zinc finger and BTB domain containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-1704]
24. OGFR ENSDARG00000037837 4 1 - - 1.000 - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
25. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - - 1.000 - - - - - -
26. FP565458.1 FP565458.1 61 1 1.000 - - - - - - - -
27. si:ch211-219a15.4 ENSDARG00000068951 3 1 1.000 - - - - - - - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
28. SNORD89 SNORD89 1 1 1.000 - - - - - - - -
29. F2RL3 ENSDARG00000079399 29 1 1.000 - - - - - - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
30. si:ch211-13o20.1 si:ch211-13o20.1 30 1 1.000 - - - - - - - -
31. AL935184.1 ENSDARG00000070039 1 1 1.000 - - - - - - - -
32. ifit2 ifit2 11 1 1.000 - - - - - - - -
33. asic2 ENSDARG00000006849 18 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
34. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
35. fam207a_1 ENSDARG00000071500 1 1 - - 1.000 - - - - - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
36. katna1 ENSDARG00000021827 221 1 1.000 - - - - - - - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
37. si:dkey-187i8.2 ENSDARG00000096624 8 1 - - 1.000 - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
38. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - - 1.000 - - - - - -
39. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
40. si:ch211-117m22.2 si:ch211-117m22.2 60 1 1.000 - - - - - - - -
41. si:ch211-10p21.1 si:ch211-10p21.1 6 1 1.000 - - - - - - - -
42. si:ch1073-15f19.2 ENSDARG00000095640 4 1 1.000 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
43. sycp1 ENSDARG00000003904 8 1 1.000 - - - - - - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
44. CABZ01085054.1 CABZ01085054.1 20 1 1.000 - - - - - - - -
45. si:dkey-111e8.4 ENSDARG00000093547, ENSDARG00000115133 1 1 - - 1.000 - - - - - - si:dkey-111e8.4 [Source:ZFIN;Acc:ZDB-GENE-060526-191]
46. si:dkey-246e3.4 ENSDARG00000086390 50 1 - - 1.000 - - - - - - si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
47. upp1 ENSDARG00000040869 2 1 1.000 - - - - - - - - uridine phosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-2]
48. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
49. GPR116_3 GPR116_3 9 1 1.000 - - - - - - - -
50. zgc:154055 ENSDARG00000103924 452 1 1.000 - - - - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
51. plcb4 1 1 - - 1.000 - - - - - - phospholipase C, beta 4
52. spc24 ENSDARG00000093622 9 1 - - 1.000 - - - - - - SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-456]
53. TAF4_1 TAF4_1 30 1 1.000 - - - - - - - -
54. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 1 1.000 - - - - - - - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
55. CABZ01032454.1 CABZ01032454.1 7 1 - - 1.000 - - - - - -
56. arl11l arl11l 31 1 1.000 - - - - - - - -
57. efna5b ENSDARG00000098625 1 1 - - 1.000 - - - - - - ephrin-A5b [Source:ZFIN;Acc:ZDB-GENE-980526-186]
58. CREM_1 CREM_1 9 1 1.000 - - - - - - - -
59. FAM150A 14 1 1.000 - - - - - - - - family with sequence similarity 150 member A, transcript variant X2
60. si:dkey-117p18.2 si:dkey-117p18.2 104 1 1.000 - - - - - - - -
61. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - 1.000 - - - - - - tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
62. CNTD1 2 1 1.000 - - - - - - - - cyclin N-terminal domain containing 1
63. si:dkey-267i17.3 si:dkey-267i17.3 4 1 1.000 - - - - - - - -
64. ano6 ENSDARG00000061544 21 1 1.000 - - - - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
65. si:ch211-210h11.7 si:ch211-210h11.7 32 1 1.000 - - - - - - - -
66. ENSDARG00000063362 ENSDARG00000063362 0 1 - - 1.000 - - - - - -
67. tecpr1a ENSDARG00000062515 7 1 - - 1.000 - - - - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
68. si:ch211-245n8.2 si:ch211-245n8.2 0 1 - - 1.000 - - - - - -
69. CACNA1F CACNA1F 2 1 - - 1.000 - - - - - -
70. tdrd9 ENSDARG00000013453 22 1 - - 1.000 - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
71. COBLL1 COBLL1 14 1 1.000 - - - - - - - -
72. sdk1b ENSDARG00000062854 16 1 1.000 - - - - - - - - sidekick cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-090311-17]
73. slc1a2a ENSDARG00000052138 5 1 1.000 - - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-100422-11]
74. si:rp71-36n21.1 93 1 - - 1.000 - - - - - - si:rp71-36n21.1
75. PEG3_33 PEG3_33 0 1 - - 1.000 - - - - - -
76. fam163b ENSDARG00000073914 46 1 1.000 - - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
77. KAZN_1 KAZN_1 13 1 1.000 - - - - - - - -
78. brpf3 brpf3 15 1 1.000 - - - - - - - -
79. edn1 ENSDARG00000036912 74 1 1.000 - - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
80. muc13b ENSDARG00000079647 67 1 1.000 - - - - - - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
81. ddx26b 79 1 1.000 - - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
82. flnb ENSDARG00000092281 10 1 1.000 - - - - - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
83. fkrp ENSDARG00000100467 0 1 - - 1.000 - - - - - - fukutin related protein [Source:ZFIN;Acc:ZDB-GENE-070412-4]
84. fermt3a fermt3a 56 1 1.000 - - - - - - - -
85. si:dkey-189d19.1 si:dkey-189d19.1 2 1 1.000 - - - - - - - -
86. URB1 ENSDARG00000060308 78 1 1.000 - - - - - - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
87. CABZ01070852.2 ENSDARG00000114999 16 1 1.000 - - - - - - - -
88. HTRA2_7 HTRA2_7 1 1 - - 1.000 - - - - - -
89. si:ch1073-160m15.1 si:ch1073-160m15.1 74 1 1.000 - - - - - - - -
90. rln3a ENSDARG00000070780 2 1 - - 1.000 - - - - - - relaxin 3a [Source:ZFIN;Acc:ZDB-GENE-050310-3]
91. rftn1a ENSDARG00000070831 5 1 1.000 - - - - - - - - raftlin, lipid raft linker 1a [Source:ZFIN;Acc:ZDB-GENE-060503-293]
92. si:ch211-170d12.2 si:ch211-170d12.2 1 1 1.000 - - - - - - - -
93. BX000701.3 BX000701.3 4 1 1.000 - - - - - - - -
94. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
95. si:ch211-234c11.1 si:ch211-234c11.1 3 1 - - 1.000 - - - - - -
96. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 1.000 - - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
97. cx45.6 cx45.6 26 1 1.000 - - - - - - - -
98. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - 1.000 - - - - - -
99. abhd10a ENSDARG00000076435 3 1 1.000 - - - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
100. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -

There are 312 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA