Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smo

Gene Name Gene ID Reads Annotation
smo ENSDARG00000002952 6411 smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]










Genes with expression patterns similar to smo

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smo ENSDARG00000002952 6411 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
2. spcs2 ENSDARG00000042823 10032 2.761 - - - - 0.964 0.850 - - 0.947 signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
3. znf865 ENSDARG00000036698 15532 2.637 - - 0.951 - 0.924 0.762 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
4. srsf3b ENSDARG00000059360 14888 2.545 - - 0.992 - 0.834 0.719 - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
5. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 2.476 - - - 0.747 - - 0.734 - 0.995 zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
6. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 2.472 - - - 0.787 0.977 - 0.708 - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
7. ube2e2 ENSDARG00000034670 5918 2.458 - - - 0.816 0.860 - 0.782 - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
8. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 2.44 - - - 0.717 0.976 - - 0.747 - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
9. UNKL ENSDARG00000037838 1086 2.394 - - - - 0.945 0.715 0.734 - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
10. kif22 ENSDARG00000102624 3694 2.365 - - - - 0.956 0.706 0.703 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
11. cbx1b ENSDARG00000054442 1206 2.315 - - - 0.844 - 0.768 0.703 - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
12. kdm1a ENSDARG00000060679 6152 2.306 0.708 - - - 0.880 - 0.718 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
13. bub1bb ENSDARG00000074927 1667 2.271 - - - 0.816 - - 0.734 0.721 - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
14. ubl3b ENSDARG00000021556 1210 2.219 - - - 0.812 - 0.701 0.706 - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
15. lypla2 ENSDARG00000053656 8971 2.183 - - - 0.733 - 0.706 0.744 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
16. arhgap1 ENSDARG00000024324 6904 1.982 - 0.992 0.990 - - - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
17. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 1.977 - 0.997 - - 0.980 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
18. toporsb ENSDARG00000105028 1898 1.976 - - 0.995 - 0.981 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
19. tbl1x ENSDARG00000060438 1386 1.966 - 0.998 - - 0.968 - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
20. lima1 lima1 4760 1.965 - 0.998 - - 0.967 - - - -
21. NPR2 ENSDARG00000104393 1875 1.959 - - - - 0.969 - - - 0.990 natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
22. C1H7orf55 C1H7orf55 2552 1.958 - 0.999 - - 0.959 - - - -
23. CU633999.1 ENSDARG00000098197 2880 1.946 - - - - 0.960 - - - 0.986
24. erh ENSDARG00000032866 20633 1.931 - - 0.961 - - - - - 0.970 enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
25. ebna1bp2 ENSDARG00000054980 4621 1.92 - 0.994 - - 0.926 - - - - EBNA1 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6989]
26. SRGAP3 ENSDARG00000060309 5353 1.898 - - - - 0.952 - - - 0.946 SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
27. marcksa ENSDARG00000004049 2518 1.872 - - - 0.935 0.937 - - - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
28. tfdp1b ENSDARG00000016304 3071 1.856 - - 0.995 - - - 0.861 - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
29. CABZ01029822.1 ENSDARG00000086931 1654 1.85 - - 0.995 0.855 - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
30. gatad2ab ENSDARG00000006192 2461 1.846 - - - 0.877 0.969 - - - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
31. CR548630.1 CR548630.1 3301 1.836 - - - 0.866 0.970 - - - -
32. FP245444.1 FP245444.1 1922 1.832 - 0.863 - - 0.969 - - - -
33. rhogc ENSDARG00000028401 2671 1.831 - - - 0.863 0.968 - - - - ras homolog gene family, member Gc [Source:ZFIN;Acc:ZDB-GENE-030131-3402]
34. dgcr14 1608 1.819 - - - 0.830 - - - - 0.989 DiGeorge syndrome critical region gene 14
35. psmc5 ENSDARG00000015315 8458 1.819 - - - - 0.972 - 0.847 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
36. dnajc18 ENSDARG00000056005 8084 1.816 - 0.998 - 0.818 - - - - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
37. larp7 ENSDARG00000017315 1194 1.794 - - - 0.819 0.975 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
38. C18H11orf58 C18H11orf58 1293 1.79 - 0.950 - - - - 0.840 - -
39. KDM6B KDM6B 10265 1.789 - 0.983 - - - - 0.806 - -
40. katnbl1 ENSDARG00000042522 1086 1.788 - - - 0.817 0.971 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
41. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.78 - - - - - 0.790 - - 0.990 cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
42. ube2e1 ENSDARG00000116649 10656 1.774 - - 0.990 - - 0.784 - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
43. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.773 - - - - 0.977 - 0.796 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
44. zgc:123105 ENSDARG00000003127 3061 1.769 - - - - 0.976 - 0.793 - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
45. cd9b ENSDARG00000016691 15573 1.762 - - - - 0.887 - - - 0.875 CD9 molecule b [Source:ZFIN;Acc:ZDB-GENE-040426-2768]
46. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.76 - - - - 0.969 - - 0.791 - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
47. odz4 odz4 822 1.758 - - - 0.780 0.978 - - - -
48. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 1.756 - - - - - - 0.760 - 0.996 zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
49. UBE2QL1 ENSDARG00000079276 3474 1.755 - - - 0.779 0.976 - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
50. ZC3H4 ENSDARG00000078355 1888 1.754 - - - 0.858 - 0.896 - - - zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
51. ssbp4 ENSDARG00000056483 10196 1.751 - - - - - - 0.804 - 0.947 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
52. zgc:77262 ENSDARG00000044545 5563 1.751 - - - - - - 0.759 - 0.992 zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
53. sipa1l2 ENSDARG00000061640 4545 1.751 - 0.996 - - - 0.755 - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
54. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 1.748 - - - - 0.958 0.790 - - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
55. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.746 - - 0.990 - - - 0.756 - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
56. skp1 ENSDARG00000003151 8172 1.742 - 0.985 - - - 0.757 - - - S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
57. nuf2 ENSDARG00000034624 2252 1.739 - - - 0.769 0.970 - - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
58. paxip1 ENSDARG00000005606 1417 1.739 - - - - 0.966 - 0.773 - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
59. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.734 - 0.976 - - - 0.758 - - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
60. CABZ01081490.1 ENSDARG00000111653 11892 1.732 - - - - 0.923 0.809 - - -
61. cxxc5a ENSDARG00000078865 3447 1.728 - 0.997 - - - - 0.731 - - CXXC finger protein 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3178]
62. DLC1 ENSDARG00000079317 2149 1.723 - - - 0.776 0.947 - - - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
63. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.723 - - - - - 0.733 - - 0.990 E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
64. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.722 0.752 - - - 0.970 - - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
65. ndufa9 ndufa9 8846 1.722 - 0.986 - - - - - - 0.736
66. rbb4l ENSDARG00000015208 5542 1.721 0.734 - - - - - - - 0.987 retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
67. tdg tdg 3269 1.72 - - - 0.895 - 0.825 - - -
68. ik ENSDARG00000004161 3132 1.718 - - 0.995 0.723 - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
69. meis2b ENSDARG00000077840 5166 1.71 - - - 0.878 0.832 - - - - Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
70. acsl3b ENSDARG00000014674 3748 1.71 - 0.993 - - - 0.717 - - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
71. LONRF2 LONRF2 721 1.71 - - - - - 0.810 0.900 - -
72. cdk6 ENSDARG00000070228 1778 1.707 - - - - - 0.867 0.840 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
73. ypel5 ENSDARG00000088929 1011 1.707 - - - - 0.975 - 0.732 - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
74. smn1 ENSDARG00000018494 1024 1.706 - - - 0.725 0.981 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
75. usp36 ENSDARG00000032327 1884 1.705 - - - 0.732 0.973 - - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
76. pmela ENSDARG00000091298 5179 1.701 - - - 0.713 - - - - 0.988 premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
77. dnajb12b ENSDARG00000087473 3811 1.7 - 0.996 - - - - 0.704 - - DnaJ (Hsp40) homolog, subfamily B, member 12b [Source:ZFIN;Acc:ZDB-GENE-070410-128]
78. elof1 ENSDARG00000099453 6176 1.698 - - - - - - 0.708 - 0.990 ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
79. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.697 - - 0.995 - 0.702 - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
80. atxn7l3 ENSDARG00000029331 531 1.696 - - - 0.719 0.977 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
81. ppp4ca ENSDARG00000070570 8395 1.696 - - - - 0.969 - 0.727 - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
82. eif5b ENSDARG00000016548 3972 1.694 - - - - 0.932 - 0.762 - - eukaryotic translation initiation factor 5B [Source:ZFIN;Acc:ZDB-GENE-050208-20]
83. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 1.694 - - 0.971 - - - 0.723 - - protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
84. rhoac ENSDARG00000116058 9256 1.692 - - - 0.731 - - - - 0.961 ras homolog gene family, member Ac [Source:ZFIN;Acc:ZDB-GENE-040426-2665]
85. atp6v1h ENSDARG00000006370 7028 1.688 - - - - - - 0.717 - 0.971 ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
86. brms1la ENSDARG00000006235 2011 1.685 - - - - 0.975 - 0.710 - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
87. ube2v1 ENSDARG00000041875 5739 1.68 - - - - 0.925 - 0.755 - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
88. maf maf 1824 1.677 - - - - - 0.737 - - 0.940
89. calr ENSDARG00000076290 13987 1.676 - 0.955 - - - 0.721 - - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
90. lsm14ab ENSDARG00000100553 3837 1.675 - - - - 0.949 - 0.726 - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
91. PTGFRN_1 ENSDARG00000075505 1447 1.673 - - - 0.779 0.894 - - - - prostaglandin F2 receptor inhibitor [Source:HGNC Symbol;Acc:HGNC:9601]
92. nxf1 ENSDARG00000055076 3251 1.671 - - - - 0.970 0.701 - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
93. ywhabb ENSDARG00000075758 23104 1.659 - 0.706 0.953 - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
94. cwc25 ENSDARG00000003382 2134 1.658 - - - 0.914 - 0.744 - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
95. psat1 ENSDARG00000016733 8084 1.655 - - - - 0.705 - - - 0.950 phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
96. fen1 ENSDARG00000011404 3358 1.651 - - - - 0.935 - 0.716 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
97. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.648 - - - 0.880 - - - 0.768 - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
98. fam49a ENSDARG00000006672 939 1.648 - - - 0.896 - - - 0.752 - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
99. mab21l1 ENSDARG00000102047 4665 1.645 - - - - - 0.767 - - 0.878 mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
100. si:ch211-51e12.7 ENSDARG00000045914 9598 1.642 - - - - 0.762 0.880 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]

There are 1554 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA