Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smndc1

Gene Name Gene ID Reads Annotation
smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]










Genes with expression patterns similar to smndc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smndc1 ENSDARG00000056235, ENSDARG00000117084 3509 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 survival motor neuron domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-614]
2. brd3b ENSDARG00000100129 6387 2.975 - 0.797 - - 0.760 0.709 - 0.709 - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
3. psmb6 ENSDARG00000002240 8015 2.374 - 0.769 - - 0.864 - - - 0.741 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
4. spag7 ENSDARG00000011555 3224 2.333 - - - - 0.879 0.724 - - 0.730 sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
5. srsf3b ENSDARG00000059360 14888 2.178 - - - - 0.725 0.704 - - 0.749 serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
6. calm1a ENSDARG00000021811 4791 1.735 - - - - 0.939 0.796 - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
7. rpl7l1 ENSDARG00000042864 3256 1.705 - - - - 0.933 0.772 - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
8. nol9 ENSDARG00000077751 2471 1.699 - 0.847 - - 0.852 - - - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
9. exoc3l4 ENSDARG00000058180 923 1.692 - - - - 0.871 0.821 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
10. nxf1 ENSDARG00000055076 3251 1.686 - - - - 0.863 0.823 - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
11. ttyh2 ENSDARG00000016934 1868 1.68 - - - - 0.916 0.764 - - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
12. nuf2 ENSDARG00000034624 2252 1.679 - 0.812 - - 0.867 - - - - NUF2, NDC80 kinetochore complex component, homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1121]
13. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.672 - - - - 0.869 0.803 - - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
14. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.67 - - - - 0.924 - - - 0.746 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
15. txlna ENSDARG00000077037 2614 1.661 - 0.785 - - 0.876 - - - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
16. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 1.66 - - - - 0.869 0.791 - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
17. atp6v0cb ENSDARG00000036577 3472 1.65 - - - - 0.921 0.729 - - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
18. nr2f1a ENSDARG00000052695 5037 1.638 - - - - 0.834 0.804 - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
19. h1fx ENSDARG00000054058 4075 1.626 - 0.779 - - 0.847 - - - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
20. cenpe ENSDARG00000063385 4428 1.622 - - - - 0.862 - - - 0.760 centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
21. bnip3la ENSDARG00000025468 3097 1.62 - 0.890 - - - - 0.730 - - BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
22. smn1 ENSDARG00000018494 1024 1.614 - 0.735 - - 0.879 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
23. vbp1 ENSDARG00000030241 10619 1.612 - 0.768 - - 0.844 - - - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
24. C20H12orf57 C20H12orf57 3325 1.609 - - - - - 0.761 0.848 - -
25. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.605 - 0.902 - - - 0.703 - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
26. msi1 ENSDARG00000010710 2634 1.605 - - - - 0.903 0.702 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
27. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 1.604 - 0.742 - - 0.862 - - - - GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
28. mdh1a mdh1a 11035 1.603 - 0.715 - - 0.888 - - - -
29. TUSC5_1 TUSC5_1 320 1.599 - - - - 0.879 0.720 - - -
30. pdcd5 ENSDARG00000026072 3135 1.594 - - - - 0.869 0.725 - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
31. nefma ENSDARG00000021351 790 1.593 - - - - 0.873 0.720 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
32. cbfa2t2 ENSDARG00000074337 4323 1.592 - - - - 0.793 - 0.799 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
33. znf865 ENSDARG00000036698 15532 1.582 - - - - 0.820 0.762 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
34. pak2b ENSDARG00000018476 4331 1.579 - - - - - 0.824 - - 0.755 p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
35. C24H17orf96 C24H17orf96 1538 1.578 - - - - 0.846 0.732 - - -
36. TUBB8P7_1 TUBB8P7_1 2722 1.577 - - - - 0.871 0.706 - - -
37. arid1aa ENSDARG00000101710 3644 1.576 - 0.824 - - - 0.752 - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
38. slc2a15b ENSDARG00000053269 899 1.574 - - - - 0.874 0.700 - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
39. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.573 - - - - 0.859 - - - 0.714 N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
40. snrpf ENSDARG00000105037 10241 1.571 - 0.814 - - - 0.757 - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
41. zbtb18 ENSDARG00000028228 3653 1.563 - 0.777 - - - 0.786 - - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
42. zgc:158409 zgc:158409 21963 1.56 - 0.766 - - - 0.794 - - -
43. psmd12 ENSDARG00000052377 7763 1.559 - 0.753 - - - - 0.806 - - proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
44. sf1 ENSDARG00000008188 5142 1.557 - - - - - 0.782 - - 0.775 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
45. hsp90b1 ENSDARG00000003570, ENSDARG00000114206 5097 1.555 - 0.803 - - - - - 0.752 - heat shock protein 90, beta (grp94), member 1 [Source:ZFIN;Acc:ZDB-GENE-031002-1]
46. oxsr1a ENSDARG00000034189 4314 1.555 - 0.816 - - - 0.739 - - - oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
47. gorasp2 ENSDARG00000015126 3923 1.553 - 0.716 - - - - 0.837 - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
48. nrarpb ENSDARG00000018958 6225 1.552 - - - - 0.785 0.767 - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
49. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.55 - 0.784 - - - - - - 0.766 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
50. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.549 - - - - 0.813 0.736 - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
51. babam1 ENSDARG00000077526 776 1.545 - - - - - 0.810 0.735 - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
52. sarnp ENSDARG00000059357 4768 1.542 - 0.760 - - - 0.782 - - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
53. plcg1 ENSDARG00000038442 5324 1.541 - 0.806 - - - 0.735 - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
54. cdc27 ENSDARG00000056258 1836 1.538 - 0.835 - - - - - - 0.703 cell division cycle 27 [Source:ZFIN;Acc:ZDB-GENE-990706-2]
55. arrdc3b ENSDARG00000036028 3157 1.537 - - - - - 0.808 0.729 - - arrestin domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-040912-182]
56. atp6v1c1a ENSDARG00000023967 4611 1.523 - - - - - 0.782 0.741 - - ATPase H+ transporting V1 subunit C1a [Source:ZFIN;Acc:ZDB-GENE-030616-612]
57. TAF15 ENSDARG00000070019 5102 1.523 - 0.749 - - - - 0.774 - - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
58. CR388231.3 ENSDARG00000105601 2404 1.522 - - - - - 0.765 - - 0.757
59. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.519 - 0.800 - - - - 0.719 - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
60. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.518 - 0.808 - - - 0.710 - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
61. ccdc85ca ENSDARG00000005232 3218 1.515 - - - - - 0.717 - - 0.798 coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
62. rab9b ENSDARG00000103391 813 1.511 - 0.773 - - - - 0.738 - - RAB9B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-091118-112]
63. GBF1_1 GBF1_1 1652 1.51 - 0.725 - - - - 0.785 - -
64. hspb9 ENSDARG00000078674 2755 1.509 - 0.791 - - - 0.718 - - - heat shock protein, alpha-crystallin-related, 9 [Source:ZFIN;Acc:ZDB-GENE-080214-6]
65. smc1al ENSDARG00000058203 8838 1.506 - 0.767 - - - 0.739 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
66. cand1 ENSDARG00000017841 8164 1.506 - - - - - 0.786 0.720 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
67. CAMK2G CAMK2G 3537 1.504 - - - - - 0.792 - 0.712 -
68. tes ENSDARG00000051857 2020 1.502 - - - - - 0.800 0.702 - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
69. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.501 - - - - - 0.729 0.772 - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
70. elof1 ENSDARG00000099453 6176 1.5 - 0.764 - - - 0.736 - - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
71. scocb ENSDARG00000002217 1844 1.491 - - - 0.709 - 0.782 - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
72. foxk2 ENSDARG00000030583 2982 1.489 - - - - - 0.742 - - 0.747 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
73. sept9b ENSDARG00000103900, ENSDARG00000113442 1495 1.486 - - - - - 0.777 0.709 - - septin 9b [Source:ZFIN;Acc:ZDB-GENE-050327-17]
74. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.486 - - - - - 0.760 - 0.726 - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
75. sppl2 ENSDARG00000030448 1040 1.482 - 0.710 - - - 0.772 - - - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
76. mknk2b ENSDARG00000015164 2158 1.481 - 0.746 - - - 0.735 - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
77. tp53bp2 tp53bp2 1969 1.469 - 0.756 - - - 0.713 - - -
78. GABARAP GABARAP 8341 1.468 - 0.758 - - - 0.710 - - -
79. prkcbp1l ENSDARG00000011932 2714 1.467 - - - - - 0.751 - 0.716 - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
80. si:ch211-13c6.2 ENSDARG00000027738 1521 1.466 - - - - - 0.756 - - 0.710 si:ch211-13c6.2 [Source:ZFIN;Acc:ZDB-GENE-060503-666]
81. rbm25 rbm25 3629 1.461 - - - - - 0.756 - - 0.705
82. cxxc1 cxxc1 914 1.459 - 0.733 - - - - - - 0.726
83. DBF4B ENSDARG00000086550 374 1.459 - - - - - 0.757 - - 0.702 DBF4 zinc finger B [Source:ZFIN;Acc:ZDB-GENE-121214-269]
84. CABZ01062452.1 CABZ01062452.1 1721 1.456 - 0.735 - - - 0.721 - - -
85. cpsf6 ENSDARG00000018618 3923 1.454 - 0.735 - - - - - - 0.719 cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
86. sub1b ENSDARG00000007720, ENSDARG00000112010 2258 1.443 - - 0.717 - - - - - 0.726 SUB1 homolog, transcriptional regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-209]
87. ube2d1b ENSDARG00000038576 5971 1.442 - - - - - 0.724 - - 0.718 ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
88. arhgef2 ENSDARG00000075819 2173 1.44 - - - - - 0.709 - - 0.731 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
89. traf4a ENSDARG00000003963, ENSDARG00000109586 1595 1.437 - - - - - 0.734 - 0.703 - tnf receptor-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-040308-1]
90. lypla2 ENSDARG00000053656 8971 1.425 0.714 - - - - - - - 0.711 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
91. gtf2a1 ENSDARG00000011000 2026 1.422 - - - - - 0.716 0.706 - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
92. tbl1xr1b ENSDARG00000008966 2203 1.422 - - - - - - 0.717 - 0.705 transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
93. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 1.417 - - - - - 0.707 - - 0.710 coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
94. MAPT MAPT 4680 1.411 - - - - 0.708 0.703 - - -
95. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.409 - - - - - 0.708 0.701 - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
96. hmg20a ENSDARG00000031198 1763 0.96 - - - - 0.960 - - - - high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
97. slmapa ENSDARG00000054458 966 0.957 - - - - 0.957 - - - - sarcolemma associated protein a [Source:ZFIN;Acc:ZDB-GENE-061013-184]
98. pank1b ENSDARG00000010098 3202 0.938 - - - - 0.938 - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
99. zgc:113442 ENSDARG00000101906 3092 0.931 - - - - 0.931 - - - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
100. ppp3r1b ENSDARG00000069360 2814 0.929 - 0.929 - - - - - - - protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b [Source:ZFIN;Acc:ZDB-GENE-040912-18]

There are 1350 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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