Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smg8

Gene Name Gene ID Reads Annotation
smg8 ENSDARG00000061378 1164 SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]










Genes with expression patterns similar to smg8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smg8 ENSDARG00000061378 1164 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
2. tnrc6b ENSDARG00000074161 4597 2.384 - - - - - 0.752 0.809 0.823 - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
3. BX927351.1 ENSDARG00000096844 125 1.829 - - - - - - 0.871 0.958 -
4. hoxa13a ENSDARG00000100312 543 1.802 - - - - - - 0.928 0.874 - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
5. abhd17b ENSDARG00000035571 745 1.8 - 1.000 - - - - 0.800 - - abhydrolase domain containing 17B [Source:ZFIN;Acc:ZDB-GENE-040718-244]
6. slc44a1b ENSDARG00000090982 240 1.794 - - - - - - 0.839 0.955 - solute carrier family 44 (choline transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-050309-63]
7. gchfr ENSDARG00000098588 169 1.79 0.851 - - - - - - 0.939 - GTP cyclohydrolase I feedback regulator [Source:ZFIN;Acc:ZDB-GENE-040426-1731]
8. tefb ENSDARG00000098103 370 1.789 - - - - - - 0.856 0.933 - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
9. map7d1a ENSDARG00000098802 118 1.787 0.851 - - - - - - 0.936 - MAP7 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-060503-22]
10. CU928070.1 CU928070.1 1152 1.785 - - - - - - 0.864 0.921 -
11. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.769 - 0.998 - - - - 0.771 - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
12. HYKK HYKK 261 1.767 0.828 - - - - - 0.939 - -
13. si:rp71-80o10.4 ENSDARG00000094316 279 1.762 0.833 - - - - - - 0.929 - si:rp71-80o10.4 [Source:ZFIN;Acc:ZDB-GENE-090313-413]
14. chrac1 ENSDARG00000042337 2590 1.758 - - - - - - 0.867 0.891 - chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
15. adamtsl7 ENSDARG00000055439 575 1.734 0.860 - - - - - - 0.874 - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
16. RBM33 RBM33 1954 1.724 0.725 0.999 - - - - - - -
17. sar1b ENSDARG00000103403 1699 1.717 - - - - - - 0.845 0.872 - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
18. smcr8a ENSDARG00000052818 559 1.714 0.795 - - - - - 0.919 - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
19. smu1 smu1 982 1.709 - - - - - - 0.818 0.891 -
20. fgf8a ENSDARG00000003399 580 1.708 - - - - - - 0.891 0.817 - fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
21. dcaf12 ENSDARG00000063155 697 1.7 - - - - - - 0.794 0.906 - DDB1 and CUL4 associated factor 12 [Source:ZFIN;Acc:ZDB-GENE-061013-363]
22. glmna ENSDARG00000058267 597 1.699 - - - - - - 0.783 0.916 - glomulin, FKBP associated protein a [Source:ZFIN;Acc:ZDB-GENE-041114-120]
23. prkceb ENSDARG00000069928, ENSDARG00000114025 330 1.692 - - - - - - 0.726 0.966 - protein kinase C, epsilon b [Source:ZFIN;Acc:ZDB-GENE-081028-47]
24. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.691 - - - - - - 0.882 0.809 - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
25. ppm1aa ENSDARG00000032155 1039 1.686 - - - - - - 0.725 0.961 - protein phosphatase, Mg2+/Mn2+ dependent, 1Aa [Source:ZFIN;Acc:ZDB-GENE-991102-15]
26. rcor3 ENSDARG00000004502 680 1.684 - - - 0.759 - - 0.925 - - REST corepressor 3 [Source:ZFIN;Acc:ZDB-GENE-050208-371]
27. cyp26c1 ENSDARG00000056029 1426 1.679 0.761 - - - - - 0.918 - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
28. zgc:153924 507 1.676 - - - - - - 0.792 0.884 - zgc:153924
29. fam43a ENSDARG00000043009 792 1.667 0.720 - - - - - - 0.947 - family with sequence similarity 43, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6098]
30. psmd4b ENSDARG00000023279 2002 1.658 - - - - - - 0.865 0.793 - proteasome 26S subunit, non-ATPase 4b [Source:ZFIN;Acc:ZDB-GENE-050417-96]
31. fah ENSDARG00000101762 274 1.654 - - - - - - 0.746 0.908 - fumarylacetoacetate hydrolase (fumarylacetoacetase) [Source:ZFIN;Acc:ZDB-GENE-030131-1091]
32. dram2b ENSDARG00000044241 503 1.648 - - - - - - 0.843 0.805 - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
33. gnb1a ENSDARG00000090454 481 1.64 0.871 - - - - - 0.769 - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
34. lrrc8a lrrc8a 674 1.621 - - - - - 0.785 0.836 - -
35. stk38a ENSDARG00000019973 1343 1.621 - - - - - - 0.848 0.773 - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
36. CNNM2 CNNM2 225 1.615 0.796 - - - - - 0.819 - -
37. slc25a27 ENSDARG00000042873 297 1.609 0.810 - - - - - - 0.799 - solute carrier family 25, member 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1290]
38. PTDSS2 ENSDARG00000101018 881 1.607 - - - 0.803 - - - 0.804 - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
39. h2afy ENSDARG00000099329 286 1.602 0.833 - - - - - 0.769 - - H2A histone family, member Y [Source:ZFIN;Acc:ZDB-GENE-060421-4796]
40. USO1 ENSDARG00000019581 1617 1.599 - - - - - - 0.778 0.821 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
41. crebbpa ENSDARG00000104609 1739 1.594 - - - - - - 0.793 0.801 - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
42. ptpn23a ENSDARG00000070124 1206 1.589 - - - - - - 0.714 0.875 - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
43. ptgs2a ENSDARG00000004539 1207 1.573 - - - - - - 0.740 0.833 - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
44. prrc1 ENSDARG00000044304 1567 1.549 - - - - - - 0.829 0.720 - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
45. CARD11 ENSDARG00000052741 249 1.548 - - - 0.732 - - 0.816 - - caspase recruitment domain family, member 11 [Source:ZFIN;Acc:ZDB-GENE-100219-1]
46. BX511129.1 ENSDARG00000093452 340 1.547 - - - - - 0.719 0.828 - - uncharacterized LOC100535312 [Source:NCBI gene;Acc:100535312]
47. sc:d808 sc:d808 379 1.546 - - - - - - 0.773 0.773 -
48. polr2gl ENSDARG00000056127 1771 1.545 - - - - - - 0.836 0.709 - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
49. cyb5r1 ENSDARG00000018966, ENSDARG00000112062 1017 1.534 - - - - - - 0.781 0.753 - cytochrome b5 reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8497]
50. sema3fa ENSDARG00000011163 759 1.527 0.820 - - 0.707 - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
51. ubiad1 ENSDARG00000013009 383 1.513 0.745 - - - - 0.768 - - - UbiA prenyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3205]
52. adam17a ENSDARG00000043213 1305 1.508 - - - - - - - 0.802 0.706 ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
53. si:dkey-27i16.3 si:dkey-27i16.3 494 1.5 - - - 0.701 - - - 0.799 -
54. nudt1 ENSDARG00000030573 268 1.498 0.712 - - - - - 0.786 - - nudix (nucleoside diphosphate linked moiety X)-type motif 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2757]
55. aatka ENSDARG00000078222 218 1.498 0.726 - - - - - 0.772 - - apoptosis-associated tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-100812-4]
56. CR382363.1 ENSDARG00000097381 1637 1.459 0.706 - - - - - 0.753 - -
57. CR762436.4 CR762436.4 267 1.418 0.712 - - 0.706 - - - - -
58. COMMD6 ENSDARG00000074204 310 1.417 0.711 - - - - - 0.706 - - COMM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-070912-209]
59. fam177a1 ENSDARG00000079636 2391 1 - 1.000 - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
60. si:dkey-117m1.4 ENSDARG00000093120 1666 1 - 1.000 - - - - - - - si:dkey-117m1.4 [Source:ZFIN;Acc:ZDB-GENE-090313-177]
61. id4 ENSDARG00000045131 2916 1 - 1.000 - - - - - - - inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
62. pwp1 ENSDARG00000015921 1160 1 - 1.000 - - - - - - - PWP1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1049]
63. hoxc12b ENSDARG00000103133 1290 1 - 1.000 - - - - - - - homeobox C12b [Source:ZFIN;Acc:ZDB-GENE-000329-17]
64. PITPNC1 ENSDARG00000099260 1096 1 - 1.000 - - - - - - - phosphatidylinositol transfer protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:21045]
65. ptpreb ENSDARG00000021151 739 1 - 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]
66. nfyba ENSDARG00000039185 1804 1 - 1.000 - - - - - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
67. fynb ENSDARG00000025319 1175 1 - 1.000 - - - - - - - FYN proto-oncogene, Src family tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-050706-89]
68. qdpra ENSDARG00000040190 4064 1 - 1.000 - - - - - - - quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
69. fgfrl1a ENSDARG00000032617 1546 1 - 1.000 - - - - - - - fibroblast growth factor receptor like 1a [Source:ZFIN;Acc:ZDB-GENE-040128-2]
70. pdgfrl ENSDARG00000006456, ENSDARG00000116983 1020 1 - 1.000 - - - - - - - platelet-derived growth factor receptor-like [Source:ZFIN;Acc:ZDB-GENE-040426-901]
71. BX005368.2 BX005368.2 702 1 - 1.000 - - - - - - -
72. itpkcb ENSDARG00000067741 2370 1 - 1.000 - - - - - - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
73. slc25a36b ENSDARG00000015915 1750 1 - 1.000 - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
74. larp7 ENSDARG00000017315 1194 1 - 1.000 - - - - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
75. hoxc13a ENSDARG00000070353 4815 1 - 1.000 - - - - - - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
76. ADAMTS17 ENSDARG00000075555 887 1 - 1.000 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 17 [Source:ZFIN;Acc:ZDB-GENE-121030-7]
77. zcchc14 ENSDARG00000101242 630 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-060503-319]
78. ak4 ENSDARG00000006546 1528 0.999 - 0.999 - - - - - - - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
79. pon1 ENSDARG00000032496 1375 0.999 - 0.999 - - - - - - - paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
80. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.999 - 0.999 - - - - - - - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
81. pgm5 ENSDARG00000060745, ENSDARG00000114684 1083 0.999 - 0.999 - - - - - - - phosphoglucomutase 5 [Source:ZFIN;Acc:ZDB-GENE-060503-838]
82. mrpl11 ENSDARG00000013075 2927 0.999 - 0.999 - - - - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
83. dctn2 ENSDARG00000031388 3825 0.999 - 0.999 - - - - - - - dynactin 2 (p50) [Source:ZFIN;Acc:ZDB-GENE-040426-1279]
84. plod1a ENSDARG00000059746 3364 0.999 - 0.999 - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
85. rtn3 ENSDARG00000091348 2070 0.999 - 0.999 - - - - - - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
86. tyms ENSDARG00000042894 3068 0.999 - 0.999 - - - - - - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
87. si:dkeyp-44a8.2 ENSDARG00000092493 8308 0.999 - 0.999 - - - - - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
88. usp7 ENSDARG00000073710 7017 0.998 - 0.998 - - - - - - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
89. pkmb ENSDARG00000099860 25094 0.998 - 0.998 - - - - - - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
90. abhd10b 2128 0.998 - 0.998 - - - - - - - abhydrolase domain containing 10b
91. ube2i2 ube2i2 4828 0.998 - 0.998 - - - - - - -
92. ddx21 ENSDARG00000063626 6695 0.997 - 0.997 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
93. tgm2a ENSDARG00000070157 4516 0.996 - 0.996 - - - - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
94. COLGALT1 ENSDARG00000073974 5069 0.996 - 0.996 - - - - - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
95. SPEG SPEG 4017 0.996 - 0.996 - - - - - - -
96. tmem189 ENSDARG00000042732 4004 0.995 - 0.995 - - - - - - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
97. h2afy2_1 ENSDARG00000087897 9887 0.994 - 0.994 - - - - - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
98. spcs2 ENSDARG00000042823 10032 0.994 - 0.994 - - - - - - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
99. chd7 ENSDARG00000075211 12085 0.993 - 0.993 - - - - - - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
100. dip2a ENSDARG00000078058 1625 0.988 - 0.988 - - - - - - - disco-interacting protein 2 homolog A [Source:ZFIN;Acc:ZDB-GENE-091204-2]

There are 1322 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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