Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smek1

Gene Name Gene ID Reads Annotation
smek1 ENSDARG00000042187 3509 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]










Genes with expression patterns similar to smek1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smek1 ENSDARG00000042187 3509 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
2. fkbp3 ENSDARG00000098059 5428 2.562 - - - - 0.944 0.854 0.764 - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
3. st5 ENSDARG00000037363, ENSDARG00000112276 1797 2.501 - 0.725 - - - 0.919 0.857 - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
4. tet3 ENSDARG00000062646 6672 2.473 - - - - 0.927 0.782 0.764 - - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
5. snrpe ENSDARG00000033175 7462 2.472 - 0.732 - - 0.979 - 0.761 - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
6. snrpc ENSDARG00000009871 9567 2.371 - - - - 0.906 - 0.726 - 0.739 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
7. ttk ENSDARG00000041361 3911 2.368 - - - - 0.805 0.828 - - 0.735 ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
8. eif4h ENSDARG00000042252 6742 2.349 - 0.741 - - - - 0.812 - 0.796 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
9. pl10 pl10 10795 2.339 - 0.711 - - 0.804 - 0.824 - -
10. HIPK1_1 HIPK1_1 8096 2.333 - - - - - 0.746 0.791 - 0.796
11. Sep-06 Sep-06 5465 2.332 - 0.734 - - - - 0.878 - 0.720
12. mxd3 ENSDARG00000098350 3040 2.323 - - - - - 0.812 0.740 - 0.771 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
13. ddx39ab ENSDARG00000015111 11619 2.279 - 0.779 - - - - 0.759 - 0.741 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
14. srrm1 ENSDARG00000001244 4972 2.242 - 0.737 0.711 - - - 0.794 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
15. cbx3a ENSDARG00000003860 4922 2.241 - 0.791 - - - - 0.709 - 0.741 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
16. puf60a ENSDARG00000032175 5618 2.238 - - - - - 0.737 0.752 - 0.749 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
17. smc1al ENSDARG00000058203 8838 2.235 - - 0.736 - - - 0.744 - 0.755 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
18. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 2.207 - 0.717 - - - 0.768 0.722 - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
19. usp7 ENSDARG00000073710 7017 2.197 - - - - 0.716 - 0.714 - 0.767 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
20. arhgef2 ENSDARG00000075819 2173 2.186 - 0.702 0.718 - - - - - 0.766 rho/rac guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030717-1]
21. CU571336.2 CU571336.2 2690 2.156 - - 0.706 - - - 0.703 - 0.747
22. tgif1 ENSDARG00000059337 4020 2.142 - - - - - 0.706 0.725 - 0.711 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
23. zdhhc9 ENSDARG00000060515 981 1.873 - - - - 0.967 0.906 - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
24. trpc4apa ENSDARG00000018840 2543 1.821 - - - - 0.967 0.854 - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
25. slc4a2b ENSDARG00000052330 1900 1.787 - - - - 0.967 0.820 - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
26. pds5b ENSDARG00000098897 1732 1.775 - - - - 0.979 - 0.796 - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
27. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 1.774 - - - - 0.942 - 0.832 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
28. s100v1 ENSDARG00000070427 6633 1.77 - - - - 0.927 0.843 - - - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
29. vgll4b ENSDARG00000103730 5266 1.767 - - - - 0.952 - 0.815 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
30. maf1 ENSDARG00000013122 3365 1.766 - - - - 0.977 - 0.789 - - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
31. KIF4A KIF4A 3322 1.759 - - 0.779 - 0.980 - - - -
32. tacc3 ENSDARG00000005454 2305 1.748 - - - - - 0.929 0.819 - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
33. Sep-02 Sep-02 10074 1.736 - - - - 0.910 - 0.826 - -
34. ash2l ENSDARG00000060392 4916 1.734 - - - - 0.974 - 0.760 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
35. akirin1 ENSDARG00000039969, ENSDARG00000116670 2533 1.732 - - - - 0.976 - - - 0.756 akirin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2178]
36. snrpa ENSDARG00000018890 4593 1.731 - - - - 0.927 - - - 0.804 small nuclear ribonucleoprotein polypeptide A [Source:ZFIN;Acc:ZDB-GENE-030131-2841]
37. snx1a ENSDARG00000071031 3975 1.726 - - - - 0.967 - 0.759 - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
38. denr ENSDARG00000037229 8370 1.726 - - - - 0.950 - 0.776 - - density-regulated protein [Source:ZFIN;Acc:ZDB-GENE-040718-450]
39. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.724 - - - - 0.971 - 0.753 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
40. wsb1 ENSDARG00000021343 3828 1.71 - - - - 0.946 - 0.764 - - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
41. cebpg ENSDARG00000036073 3791 1.708 - - - - 0.964 0.744 - - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
42. frmd6 ENSDARG00000002332 2698 1.707 - 0.846 - - - 0.861 - - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
43. arl14ep ENSDARG00000001210 3029 1.707 - - - 0.729 0.978 - - - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
44. nudt3a ENSDARG00000016256 2713 1.693 - - - - 0.960 - 0.733 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
45. cd248b ENSDARG00000077938 2561 1.691 - 0.722 - - 0.969 - - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
46. rfc5 ENSDARG00000035634 974 1.688 - - 0.713 - 0.975 - - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
47. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 1.685 - 0.717 - - 0.968 - - - -
48. ifrd2 ENSDARG00000036811, ENSDARG00000115385 3697 1.683 - 0.724 - - 0.959 - - - - interferon-related developmental regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-140]
49. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.683 - - 0.708 - 0.975 - - - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
50. notch2 ENSDARG00000043130 4430 1.675 - - - - 0.954 0.721 - - - notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
51. sox9b ENSDARG00000043923 5375 1.675 - - - - 0.961 - - - 0.714 SRY (sex determining region Y)-box 9b [Source:ZFIN;Acc:ZDB-GENE-001103-2]
52. AP2A1 ENSDARG00000054320 5591 1.674 - 0.711 - - 0.963 - - - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
53. vps25 ENSDARG00000059079 3747 1.671 - - - - 0.957 - 0.714 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
54. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.67 - - - - - 0.887 - - 0.783 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
55. aip ENSDARG00000104437 3574 1.669 - - - - 0.934 - - - 0.735 aryl hydrocarbon receptor interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-6735]
56. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.667 - - - - - 0.902 0.765 - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
57. C2H6orf52 C2H6orf52 2847 1.666 - 0.771 - - - 0.895 - - -
58. psmb6 ENSDARG00000002240 8015 1.662 - - - - - 0.944 - - 0.718 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
59. mesdc2 776 1.662 - 0.759 - - - 0.903 - - - mesoderm development candidate 2, transcript variant X2
60. SNRPG ENSDARG00000099667 18697 1.658 - - - - - - 0.865 - 0.793 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
61. ik ENSDARG00000004161 3132 1.656 0.765 - - - - 0.891 - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
62. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.655 - - - - 0.944 - 0.711 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
63. SIK1 ENSDARG00000058606 1982 1.652 - 0.753 - - - 0.899 - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
64. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.645 - - - - - 0.922 - 0.723 - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
65. srsf6a ENSDARG00000013729 8576 1.644 - - - - 0.917 - 0.727 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
66. myeov2 3351 1.643 - - - - - 0.915 0.728 - - myeloma overexpressed 2
67. actr2a ENSDARG00000052438 5838 1.639 - - - 0.705 - 0.934 - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
68. FAM171A2 FAM171A2 707 1.635 - - - - - 0.917 - - 0.718
69. safb ENSDARG00000020467 5608 1.62 - - - - - 0.863 - - 0.757 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
70. xrcc1 ENSDARG00000009494 1346 1.614 - - - - - 0.898 - - 0.716 X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
71. tns1 tns1 5891 1.612 - 0.775 - - - 0.837 - - -
72. pfn2l ENSDARG00000012682 21690 1.608 - - - - 0.789 - 0.819 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
73. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.604 - - - - - - 0.779 - 0.825 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
74. CDK5RAP2 CDK5RAP2 636 1.602 - - - - - 0.901 0.701 - -
75. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 1.602 - - - - - 0.875 - - 0.727 histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
76. smg7 ENSDARG00000060767 2759 1.595 - - - - - 0.894 0.701 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
77. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.592 - - - - - 0.844 0.748 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
78. ostc ENSDARG00000104901 16240 1.586 - - - - 0.810 0.776 - - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
79. WU:FC32F04 WU:FC32F04 2525 1.582 - 0.745 - - - 0.837 - - -
80. slc39a10 ENSDARG00000005823 2634 1.58 - 0.765 - - - 0.815 - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
81. EEF1E1 ENSDARG00000071774 3806 1.579 - 0.786 - - - 0.793 - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
82. setd2 ENSDARG00000062244 808 1.575 - 0.721 - - - 0.854 - - - SET domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2140]
83. parp1 ENSDARG00000019529 6787 1.569 - - 0.783 - - - - - 0.786 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
84. efna1a ENSDARG00000030326 1692 1.569 - - - - - 0.771 0.798 - - ephrin-A1a [Source:ZFIN;Acc:ZDB-GENE-040426-1135]
85. setd8a 2549 1.569 - - - - - - 0.838 - 0.731 SET domain containing (lysine methyltransferase) 8a
86. CARKD 1398 1.566 - - - - - 0.834 0.732 - - carbohydrate kinase domain containing, transcript variant X7
87. strbp ENSDARG00000021455 1279 1.564 - - - - - 0.853 0.711 - - spermatid perinuclear RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030729-18]
88. nfe2l3 ENSDARG00000019810 3682 1.556 - - - 0.774 - 0.782 - - - nuclear factor, erythroid 2-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2334]
89. ccnk ENSDARG00000034146 1255 1.553 - - - - - 0.841 0.712 - - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
90. HNRNPAB HNRNPAB 22267 1.552 - - - - - - 0.823 - 0.729
91. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 1.549 0.810 - 0.739 - - - - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
92. kpna3 ENSDARG00000052641 5347 1.547 - 0.806 - - - - 0.741 - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
93. tmem50a ENSDARG00000015757 3244 1.546 - - - - - 0.841 0.705 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
94. gna11b ENSDARG00000053326 5118 1.546 - - - - - - 0.841 - 0.705 guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
95. dnaja2 ENSDARG00000104066 11946 1.543 - - - - - 0.841 - - 0.702 DnaJ (Hsp40) homolog, subfamily A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2884]
96. ccnb3 ENSDARG00000034855, ENSDARG00000110875 2123 1.542 - - - - - - 0.794 - 0.748 cyclin B3 [Source:ZFIN;Acc:ZDB-GENE-060929-684]
97. stmn1a ENSDARG00000004169 21169 1.542 - - - - - - 0.775 - 0.767 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
98. rbmx ENSDARG00000014244 3445 1.54 - 0.808 - - - - - - 0.732 RNA binding motif protein X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-579]
99. mrps26 ENSDARG00000039719, ENSDARG00000117175 1514 1.536 - - - - - 0.720 0.816 - - mitochondrial ribosomal protein S26 [Source:ZFIN;Acc:ZDB-GENE-040718-115]
100. zranb2 ENSDARG00000044332 6723 1.535 - 0.736 - - - - - - 0.799 zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]

There are 1683 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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