Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smdt1

Gene Name Gene ID Reads Annotation
smdt1 smdt1 99










Genes with expression patterns similar to smdt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smdt1 smdt1 99 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. si:dkey-154p10.3 ENSDARG00000068366 153 1.782 - 0.994 - - - 0.788 - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
3. pdf ENSDARG00000013950 293 1.782 0.845 0.937 - - - - - - - peptide deformylase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050913-42]
4. trmt1l ENSDARG00000042057 466 1.769 - 0.974 - - - 0.795 - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
5. rab33ba ENSDARG00000052290 914 1.765 - 0.970 - - - - 0.795 - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
6. ano1 ENSDARG00000102335 445 1.682 - 0.911 - - - 0.771 - - - anoctamin 1, calcium activated chloride channel [Source:ZFIN;Acc:ZDB-GENE-121127-3]
7. pnpla2 ENSDARG00000089390 129 1.675 - 0.962 - - - - 0.713 - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
8. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 1.63 - 0.907 - - - 0.723 - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
9. mfsd6b ENSDARG00000054583 239 1.625 - - - - - 0.884 0.741 - - major facilitator superfamily domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040912-84]
10. gtpbp2 272 1.621 0.794 - - - - 0.827 - - - GTP binding protein 2
11. fkbp7 ENSDARG00000010962 2986 1.583 - 0.862 - - - - 0.721 - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
12. CU633775.1 ENSDARG00000113543 319 1.556 - 0.759 - - - 0.797 - - -
13. capn7 ENSDARG00000102987 386 1.52 - 0.811 - - - 0.709 - - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
14. mad1l1 ENSDARG00000033852 464 1.426 - - - - - 0.705 0.721 - - mitotic arrest deficient 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1081]
15. eva1a ENSDARG00000061405 896 1.42 - 0.715 - - - - 0.705 - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
16. CABZ01109624.1 CABZ01109624.1 25 0.998 - 0.998 - - - - - - -
17. ZP2 ZP2 14 0.998 - 0.998 - - - - - - -
18. si:ch211-39a7.1 ENSDARG00000037427 31 0.998 - 0.998 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
19. MAP3K2 ENSDARG00000062884 34 0.998 - 0.998 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
20. si:dkey-228i19.34 si:dkey-228i19.34 43 0.998 - 0.998 - - - - - - -
21. U3_5 U3_5 67 0.998 - 0.998 - - - - - - -
22. ppapdc2 ppapdc2 67 0.998 - 0.998 - - - - - - -
23. si:ch1073-155h21.1 ENSDARG00000007582 137 0.997 - 0.997 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
24. SLC38A9 ENSDARG00000032769 35 0.997 - 0.997 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
25. CT573322.1 CT573322.1 38 0.997 - 0.997 - - - - - - -
26. usp45 ENSDARG00000075013 227 0.997 - 0.997 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
27. C12H10orf2 C12H10orf2 245 0.996 - 0.996 - - - - - - -
28. kcnk13a ENSDARG00000008212 136 0.996 - 0.996 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
29. CR388047.3 ENSDARG00000117023 89 0.996 - 0.996 - - - - - - -
30. si:ch211-105d18.6 si:ch211-105d18.6 59 0.996 - 0.996 - - - - - - -
31. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.996 - 0.996 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
32. TEAD1 TEAD1 43 0.995 - 0.995 - - - - - - -
33. zgc:109744 ENSDARG00000070800 262 0.994 - 0.994 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
34. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.994 - 0.994 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
35. si:dkey-114b16.4 si:dkey-114b16.4 35 0.994 - 0.994 - - - - - - -
36. unc13d ENSDARG00000078249 91 0.993 - 0.993 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
37. pgap2 ENSDARG00000044596 60 0.993 - 0.993 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
38. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.991 - 0.991 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
39. cyp2aa1 ENSDARG00000099003 297 0.991 - 0.991 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
40. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.991 - 0.991 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
41. CABZ01066717.1 CABZ01066717.1 351 0.991 - 0.991 - - - - - - -
42. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.99 - 0.990 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
43. CR376783.1 ENSDARG00000074235 259 0.989 - 0.989 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
44. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.989 - 0.989 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
45. cd74a ENSDARG00000009087 20 0.989 - 0.989 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
46. plce1 ENSDARG00000087921 44 0.988 - 0.988 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
47. foxn4 ENSDARG00000010591 2332 0.987 - 0.987 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
48. CABZ01114089.1 CABZ01114089.1 127 0.986 - 0.986 - - - - - - -
49. fam63b 484 0.986 - 0.986 - - - - - - - family with sequence similarity 63, member B
50. casp3b ENSDARG00000055045 54 0.985 - 0.985 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
51. rnf34a ENSDARG00000038300 179 0.985 - 0.985 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
52. UBASH3B UBASH3B 292 0.985 - 0.985 - - - - - - -
53. NUDT8 ENSDARG00000007722 329 0.985 - 0.985 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
54. alg9 ENSDARG00000012840 631 0.983 - 0.983 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
55. TM2D2 ENSDARG00000035515 561 0.983 - 0.983 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
56. cflara ENSDARG00000055966 464 0.983 - 0.983 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
57. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.982 - 0.982 - - - - - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
58. fam57ba ENSDARG00000026875 504 0.981 - 0.981 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
59. tbcelb ENSDARG00000019525 299 0.98 - 0.980 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
60. nipsnap1 ENSDARG00000005320 330 0.979 - 0.979 - - - - - - - nipsnap homolog 1 (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-991008-17]
61. casp2 ENSDARG00000062052 559 0.979 - 0.979 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
62. cmasb 499 0.979 - 0.979 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
63. btbd6a ENSDARG00000076440 748 0.978 - 0.978 - - - - - - - BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
64. kcnj1a.4 ENSDARG00000090635 356 0.977 - 0.977 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
65. acad11 ENSDARG00000045411 350 0.977 - 0.977 - - - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
66. si:ch211-215d8.2 ENSDARG00000093233 784 0.976 - 0.976 - - - - - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
67. cacng6a ENSDARG00000036457 344 0.974 - 0.974 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
68. plekhg6 ENSDARG00000086056 368 0.971 - 0.971 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
69. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.97 - 0.970 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
70. si:ch73-18b11.2 ENSDARG00000094978 148 0.97 - 0.970 - - - - - - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
71. fam105bb fam105bb 1253 0.969 - 0.969 - - - - - - -
72. RNF130 ENSDARG00000089767 559 0.968 - 0.968 - - - - - - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
73. sowahcb ENSDARG00000059582 178 0.968 - 0.968 - - - - - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
74. six2a ENSDARG00000058004, ENSDARG00000115214 414 0.967 - 0.967 - - - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
75. ATP5J 343 0.967 - 0.967 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
76. si:ch211-89o5.1 si:ch211-89o5.1 91 0.967 - 0.967 - - - - - - -
77. lrrc6 ENSDARG00000053318 146 0.967 - 0.967 - - - - - - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
78. si:dkeyp-13a3.10 ENSDARG00000092225 1054 0.966 - 0.966 - - - - - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
79. esrrd ENSDARG00000015064 291 0.965 - 0.965 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
80. sh3pxd2aa ENSDARG00000060148 913 0.965 - 0.965 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
81. si:dkeyp-123a12.2 ENSDARG00000115029 78 0.965 - 0.965 - - - - - - - si:dkeyp-123a12.2 [Source:ZFIN;Acc:ZDB-GENE-041210-271]
82. tmem150a tmem150a 543 0.964 - 0.964 - - - - - - -
83. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.963 - 0.963 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
84. gpam ENSDARG00000074169 488 0.962 - 0.962 - - - - - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-101026-1]
85. rnls ENSDARG00000012453 338 0.961 - 0.961 - - - - - - - renalase, FAD-dependent amine oxidase [Source:ZFIN;Acc:ZDB-GENE-040718-351]
86. BX005085.1 ENSDARG00000089947 230 0.961 - 0.961 - - - - - - -
87. BX005256.1 ENSDARG00000106112 467 0.96 - 0.960 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
88. tex261 ENSDARG00000044584 513 0.96 - 0.960 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
89. rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 0.959 - 0.959 - - - - - - - regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
90. dirc2 ENSDARG00000009783 484 0.958 - 0.958 - - - - - - - disrupted in renal carcinoma 2 [Source:ZFIN;Acc:ZDB-GENE-040912-167]
91. pc pc 116 0.957 - 0.957 - - - - - - -
92. ACKR3 ACKR3 235 0.957 - 0.957 - - - - - - -
93. hsd11b3a hsd11b3a 1388 0.957 - 0.957 - - - - - - -
94. CYSTM1 CYSTM1 176 0.956 - 0.956 - - - - - - -
95. RBMS1 RBMS1 258 0.956 - 0.956 - - - - - - -
96. snupn ENSDARG00000008395 507 0.956 - 0.956 - - - - - - - snurportin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3464]
97. grk5 ENSDARG00000032801 490 0.955 - 0.955 - - - - - - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
98. atp11c ENSDARG00000036442, ENSDARG00000116165 336 0.954 - 0.954 - - - - - - - ATPase phospholipid transporting 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
99. gga3 ENSDARG00000103667 675 0.954 - 0.954 - - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
100. BX000999.4_1 BX000999.4_1 222 0.954 - 0.954 - - - - - - -

There are 737 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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