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Results for smcr8a

Gene Name Gene ID Reads Annotation
smcr8a ENSDARG00000052818 559 Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]










Genes with expression patterns similar to smcr8a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smcr8a ENSDARG00000052818 559 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
2. tmem127 ENSDARG00000030981 1389 2.497 - - - - - 0.778 0.794 0.925 - transmembrane protein 127 [Source:ZFIN;Acc:ZDB-GENE-050522-97]
3. gle1 ENSDARG00000043559 1362 2.319 - - - - - 0.723 0.751 0.845 - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
4. si:ch211-113p18.3 ENSDARG00000087835 377 1.908 - - - - - - 0.915 0.993 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
5. lig4 ENSDARG00000060620 369 1.89 - - - - - - 0.895 0.995 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
6. sp1 ENSDARG00000088347 1697 1.863 - - - - - 0.886 - 0.977 - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
7. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 1.86 - - - - - 0.948 - 0.912 - D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
8. phf10 ENSDARG00000070084 1210 1.842 - - - - - 0.861 - 0.981 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
9. plat ENSDARG00000062707 491 1.839 - - - - - 0.853 - 0.986 - plasminogen activator, tissue [Source:ZFIN;Acc:ZDB-GENE-081104-181]
10. rab23 ENSDARG00000004151 1077 1.829 - - - - - 0.846 - 0.983 - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
11. C21H5orf15 C21H5orf15 2318 1.828 - - - - - - 0.874 0.954 -
12. GANAB_2 GANAB_2 3210 1.826 - - - - - 0.893 0.933 - -
13. adck1 ENSDARG00000062561 22 1.811 - - - - - 0.876 0.935 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
14. uros ENSDARG00000027491 1147 1.806 - - - - - 0.889 0.917 - - uroporphyrinogen III synthase [Source:ZFIN;Acc:ZDB-GENE-040323-2]
15. atcaya ENSDARG00000071678 344 1.804 - - - - - 0.816 - 0.988 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
16. si:dkey-21k10.2 si:dkey-21k10.2 686 1.802 0.818 - - - - - - 0.984 -
17. CABZ01043370.1 CABZ01043370.1 2013 1.79 - - - - - - 0.820 0.970 -
18. nexmifb ENSDARG00000029296 416 1.784 - - - - - 0.817 - 0.967 - neurite extension and migration factor b [Source:ZFIN;Acc:ZDB-GENE-140106-18]
19. prpf31 ENSDARG00000095904 526 1.778 - - - - - 0.787 - 0.991 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
20. si:ch211-194k22.8 ENSDARG00000096711 1318 1.776 - - - - - 0.883 0.893 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
21. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 1.775 - - - - - 0.790 - 0.985 - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
22. ek1 ENSDARG00000020080 742 1.768 - - - - - 0.780 - 0.988 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
23. prp19 prp19 4804 1.765 - - - - - - 0.874 0.891 -
24. HYKK HYKK 261 1.765 0.842 - - - - - 0.923 - -
25. spred1 ENSDARG00000041449, ENSDARG00000117025 1124 1.758 - - - - - 0.834 - 0.924 - sprouty-related, EVH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2338]
26. ercc1 ENSDARG00000031680 900 1.757 - - - - - - 0.782 0.975 - excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
27. si:dkey-180p18.9 381 1.756 - - - - - 0.798 - 0.958 - si:dkey-180p18.9
28. ZNF70_2 ZNF70_2 1866 1.755 - - - - - - 0.768 0.987 -
29. RNF5 ENSDARG00000075606 1730 1.752 - - - - - 0.771 - 0.981 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
30. tapbp tapbp 70 1.752 - - - - - 0.827 0.925 - -
31. sppl2 ENSDARG00000030448 1040 1.747 - - - - - 0.834 - 0.913 - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
32. gltpd1 gltpd1 377 1.745 - - - - - 0.832 0.913 - -
33. inadl 80 1.737 - 0.793 - - - - 0.944 - - InaD-like (Drosophila), transcript variant X4
34. gabpb2a ENSDARG00000007943 1570 1.734 - - - - - 0.864 - 0.870 - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
35. fzd7b ENSDARG00000027589 2562 1.733 - - - - - 0.847 - 0.886 - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
36. zgc:113294 ENSDARG00000032285 132 1.733 0.864 - - - - 0.869 - - - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
37. ccrl1a ccrl1a 40 1.729 - 0.771 - - - - 0.958 - -
38. asnsd1 830 1.728 - - - - - 0.737 - 0.991 - asparagine synthetase domain containing 1, transcript variant X1
39. elmod2 ENSDARG00000101669 3101 1.725 - - - - - 0.767 - 0.958 - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
40. syne1b ENSDARG00000063068 786 1.721 - - - - - - 0.734 0.987 - spectrin repeat containing, nuclear envelope 1b [Source:ZFIN;Acc:ZDB-GENE-071218-4]
41. zgc:112962 ENSDARG00000069102 431 1.72 - - - - - - 0.727 0.993 - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
42. bnipl ENSDARG00000060435 1382 1.718 - 0.923 - - - - 0.795 - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
43. smg8 ENSDARG00000061378 1164 1.714 0.795 - - - - - 0.919 - - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
44. ulk4 ENSDARG00000004176 85 1.71 - 0.786 - - - - 0.924 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
45. unc119b ENSDARG00000044362 1528 1.706 - - - - - 0.755 - 0.951 - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
46. gpr157 ENSDARG00000034975, ENSDARG00000115075 61 1.705 - - - - - 0.899 0.806 - - G protein-coupled receptor 157 [Source:ZFIN;Acc:ZDB-GENE-050809-126]
47. mcf2la ENSDARG00000075859 882 1.699 - - - - - 0.788 0.911 - - mcf.2 cell line derived transforming sequence-like a [Source:ZFIN;Acc:ZDB-GENE-090312-122]
48. GSG2 GSG2 1162 1.699 - - - - - 0.760 0.939 - -
49. CABZ01072954.1 CABZ01072954.1 2330 1.699 - - - - - 0.736 - 0.963 -
50. CR855306.1 ENSDARG00000099475 102 1.698 - - - - - 0.806 0.892 - -
51. tctex1d1 ENSDARG00000103545 409 1.694 - - - - - 0.766 0.928 - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
52. cetn3 ENSDARG00000011825 1087 1.693 - - - - - - 0.700 0.993 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
53. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.689 - - - - - 0.838 0.851 - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
54. dhrs13l1 ENSDARG00000098746 102 1.687 - - - - - 0.742 0.945 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
55. CYTH2 ENSDARG00000028800 2349 1.686 - - - - - 0.750 - 0.936 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
56. ruvbl1 ENSDARG00000002591 2381 1.686 - - - - - 0.828 0.858 - - RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
57. kri1 ENSDARG00000075380 1463 1.683 0.729 - - - - - - 0.954 - KRI1 homolog [Source:ZFIN;Acc:ZDB-GENE-040915-3]
58. hsdl1 ENSDARG00000041736 171 1.682 - 0.715 - - - - 0.967 - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
59. cyp26c1 ENSDARG00000056029 1426 1.682 0.760 - - - - - 0.922 - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
60. RUNDC1 ENSDARG00000091962 693 1.679 - - - - - 0.729 0.950 - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
61. BX470254.1_1 ENSDARG00000097402 50 1.678 - - - - - 0.889 0.789 - -
62. depdc1a ENSDARG00000018165, ENSDARG00000114097 1958 1.674 - - - - - 0.862 0.812 - - DEP domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9827]
63. nsmaf ENSDARG00000051920 474 1.674 - - - - - 0.804 0.870 - - neutral sphingomyelinase (N-SMase) activation associated factor [Source:ZFIN;Acc:ZDB-GENE-050417-342]
64. hmox2b ENSDARG00000078452, ENSDARG00000117010 884 1.669 - - - - - 0.747 0.922 - - heme oxygenase 2b [Source:ZFIN;Acc:ZDB-GENE-091118-52]
65. CABZ01073405.1 CABZ01073405.1 275 1.668 - 0.709 - - - - 0.959 - -
66. CR339053.3 CR339053.3 244 1.667 - - - - - 0.758 0.909 - -
67. pmepa1 ENSDARG00000039325 652 1.666 - - - - - 0.912 0.754 - - prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
68. ap2b1 ENSDARG00000035152 2912 1.666 - - - - - 0.827 - 0.839 - adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
69. usf1 ENSDARG00000041689 1619 1.662 - - - - - - 0.926 0.736 - upstream transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1072]
70. BX088711.1 BX088711.1 125 1.652 - - - - - 0.723 0.929 - -
71. plk4 ENSDARG00000004576 688 1.652 - - - - - 0.819 0.833 - - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
72. palm1b ENSDARG00000007818 2128 1.651 - - - - - 0.865 - 0.786 - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
73. dcakd ENSDARG00000061638 120 1.645 - 0.791 - - - 0.854 - - - dephospho-CoA kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-226]
74. HEATR6 ENSDARG00000073686 241 1.644 - - - - - 0.724 0.920 - - HEAT repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-080204-118]
75. CT030012.1 ENSDARG00000105611 154 1.64 - - - - - 0.721 0.919 - -
76. tmem8a ENSDARG00000032795 677 1.635 - - - - - 0.798 0.837 - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
77. xiap ENSDARG00000016143, ENSDARG00000110199 621 1.634 - - - - - 0.785 0.849 - - X-linked inhibitor of apoptosis [Source:ZFIN;Acc:ZDB-GENE-030825-7]
78. rab25a ENSDARG00000058800 451 1.625 - - - - - 0.824 0.801 - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
79. BX465851.1 BX465851.1 237 1.624 - - - - - 0.725 0.899 - -
80. adamtsl7 ENSDARG00000055439 575 1.623 0.808 - - - - 0.815 - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
81. ift57 ENSDARG00000021022 288 1.617 - - - - - 0.758 0.859 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
82. nin ENSDARG00000060298 1558 1.612 - - - - - 0.807 0.805 - - ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
83. gnb1a ENSDARG00000090454 481 1.611 0.806 - - - - - 0.805 - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
84. mfsd2ab ENSDARG00000035909, ENSDARG00000114714 1520 1.609 - 0.773 - - - 0.836 - - - major facilitator superfamily domain containing 2ab [Source:NCBI gene;Acc:445176]
85. BX088524.2 ENSDARG00000103268 564 1.608 - - - - - 0.800 0.808 - -
86. arhgap11a ENSDARG00000100019 1642 1.607 - - - - - 0.743 0.864 - - Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
87. ccdc12 ENSDARG00000023003, ENSDARG00000113770 1731 1.606 - - - - - - 0.804 0.802 - coiled-coil domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-040801-108]
88. qrich1 ENSDARG00000019797, ENSDARG00000111720, ENSDARG00000113429 1177 1.605 - - - - - 0.735 0.870 - - glutamine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8204]
89. nedd4l ENSDARG00000060006 1669 1.604 - 0.719 - - - 0.885 - - - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
90. syt2a ENSDARG00000025206 681 1.6 - - - - - 0.709 0.891 - - synaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
91. rad54b ENSDARG00000092134 231 1.599 - - - - - 0.795 0.804 - - RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]
92. daxx ENSDARG00000000729 734 1.593 - - - - - 0.834 0.759 - - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
93. CCDC115 ENSDARG00000033533, ENSDARG00000109365 353 1.591 0.729 - - - - 0.862 - - - coiled-coil domain containing 115 [Source:ZFIN;Acc:ZDB-GENE-050227-20]
94. ZNF337_18 ZNF337_18 152 1.586 - 0.704 - - - 0.882 - - -
95. tmem2 2572 1.585 - 0.723 - - - 0.862 - - - transmembrane protein 2, transcript variant X1
96. TMEM185A TMEM185A 5505 1.581 - 0.725 - - - 0.856 - - -
97. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 1.58 - 0.724 - - - - 0.856 - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
98. USP31 ENSDARG00000074017 628 1.577 - 0.790 - - - 0.787 - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
99. tmem201 ENSDARG00000077307 453 1.576 - - - - - 0.724 0.852 - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
100. plekha8 ENSDARG00000040698 431 1.576 - - - - - - 0.865 - 0.711 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 [Source:ZFIN;Acc:ZDB-GENE-041114-69]

There are 2257 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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