Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smc4

Gene Name Gene ID Reads Annotation
smc4 ENSDARG00000038882 4373 structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]










Genes with expression patterns similar to smc4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smc4 ENSDARG00000038882 4373 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
2. myef2 ENSDARG00000059398 6050 3.119 - - 0.751 0.796 0.716 - - 0.856 - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
3. smarcc1a ENSDARG00000017397 2957 2.91 - - - 0.715 0.731 - 0.718 - 0.746 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
4. ccne2 ENSDARG00000098529 4695 2.323 - - - 0.783 - - 0.752 0.788 - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
5. dnaja2l ENSDARG00000010745 2367 2.237 - 0.711 - - - - 0.714 0.812 - DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
6. tuba1b ENSDARG00000045367 8485 2.166 - 0.733 0.728 0.705 - - - - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
7. si:ch211-113e8.11 ENSDARG00000076585 721 1.776 - - - - - - 0.834 0.942 - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
8. mapre3b ENSDARG00000102878 362 1.734 - - - - - - 0.800 0.934 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
9. sgsm3 ENSDARG00000019038 352 1.734 - - - - - - 0.800 0.934 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
10. znf319 znf319 3027 1.728 - - - - - - 0.814 0.914 -
11. nt5c2a ENSDARG00000039399 3062 1.726 - - - - - - 0.794 0.932 - 5'-nucleotidase, cytosolic IIa [Source:ZFIN;Acc:ZDB-GENE-030131-3566]
12. zgc:65772 zgc:65772 2092 1.723 - - - - - 0.759 - 0.964 -
13. CCDC50 ENSDARG00000105136 1695 1.712 - 0.805 - - - - - 0.907 - coiled-coil domain containing 50 [Source:ZFIN;Acc:ZDB-GENE-150115-1]
14. sh3bp5a ENSDARG00000100529 642 1.691 - - - - - - 0.756 0.935 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
15. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.69 - 0.798 - - - - - 0.892 - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
16. ift46 ENSDARG00000011240 2499 1.69 - 0.748 - - - - - 0.942 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
17. SNORD38 SNORD38 171 1.674 - - - - - 0.765 - 0.909 -
18. wdr47a ENSDARG00000078136 522 1.671 - - - - - - 0.726 0.945 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
19. syt16 ENSDARG00000030761 322 1.668 - - - - - 0.765 - 0.903 - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
20. tubb5 ENSDARG00000037997 18691 1.666 - - - 0.775 - - - 0.891 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
21. gipc1 ENSDARG00000104483 2913 1.656 - - - - 0.725 - - 0.931 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
22. hmgb3a ENSDARG00000056725 15668 1.651 - - - - 0.761 - - 0.890 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
23. crb2a ENSDARG00000060106 1307 1.647 - - - - 0.713 - - 0.934 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
24. AP3B2 1874 1.643 - - - 0.717 - - - 0.926 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
25. FBXL3 FBXL3 1769 1.641 - - - - - 0.727 - 0.914 -
26. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.64 - - - - 0.787 - - 0.853 - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
27. TDG TDG 1191 1.636 - 0.707 - - - - - 0.929 -
28. prdm16 prdm16 1346 1.634 - - - - - 0.745 - 0.889 -
29. casc4 ENSDARG00000074490 2019 1.63 - 0.736 - - - - - 0.894 - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
30. rbm4.2 ENSDARG00000055080 5241 1.628 - - - - - - - 0.886 0.742 RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
31. CABZ01088071.1 CABZ01088071.1 1238 1.628 - 0.853 - - - - 0.775 - -
32. pgam5 ENSDARG00000035608 4044 1.621 - - - - - - - 0.901 0.720 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
33. ppm1g ENSDARG00000075559 6516 1.617 - - - - - - - 0.877 0.740 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
34. dhx8 ENSDARG00000054707 2088 1.614 - - - - - - 0.705 0.909 - DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-050809-39]
35. sub1a ENSDARG00000053446 13383 1.606 0.804 - 0.802 - - - - - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
36. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.6 - - - - - - 0.724 0.876 - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
37. nsa2 ENSDARG00000007708 6329 1.595 - - - - - - 0.776 0.819 - NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
38. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.591 - - - 0.725 - - - 0.866 - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
39. kdm5bb ENSDARG00000003098 531 1.589 - - - - - 0.866 0.723 - - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
40. inpp5f ENSDARG00000061437 1228 1.589 - - - - - 0.867 0.722 - - inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
41. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.588 - - - - 0.727 - - 0.861 - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
42. TMEM186 ENSDARG00000074264, ENSDARG00000109974 245 1.575 - - - - - 0.762 0.813 - - transmembrane protein 186 [Source:ZFIN;Acc:ZDB-GENE-081022-122]
43. srsf11 ENSDARG00000098574 12801 1.573 - - - - - - 0.807 - 0.766 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
44. fzd3a ENSDARG00000021664 1958 1.57 - - - - 0.719 - - 0.851 - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
45. si:ch211-140b10.6 ENSDARG00000045342 795 1.566 - - - - - 0.768 - 0.798 - si:ch211-140b10.6 [Source:ZFIN;Acc:ZDB-GENE-091204-382]
46. WDR48 WDR48 448 1.565 - - - - - 0.783 0.782 - -
47. hdac1 ENSDARG00000015427 19804 1.563 - - 0.761 - - - - - 0.802 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
48. ralbp1 ENSDARG00000078653 2440 1.545 - 0.738 - - - - - 0.807 - ralA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2098]
49. lbr ENSDARG00000014013 4835 1.533 - - - 0.787 0.746 - - - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
50. FNIP1 ENSDARG00000102171 1005 1.533 - 0.758 - - - 0.775 - - - folliculin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3586]
51. tollip ENSDARG00000098486 1118 1.531 - - - - - 0.708 0.823 - - toll interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-8820]
52. sf3b1 ENSDARG00000056138 5785 1.527 - - - - 0.759 - - - 0.768 splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
53. cwc22 ENSDARG00000014008 2385 1.517 - 0.802 - - - - 0.715 - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
54. irf2bp2a ENSDARG00000004702 6719 1.516 - 0.750 - - - - 0.766 - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
55. dlb ENSDARG00000004232 5120 1.514 - - - 0.808 0.706 - - - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
56. ufm1 ENSDARG00000043857 4152 1.505 - 0.702 - - - - - 0.803 - ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
57. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 1.504 - 0.778 - - - 0.726 - - - transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
58. mycn ENSDARG00000006837 1616 1.499 - 0.759 - - 0.740 - - - - MYCN proto-oncogene, bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-020711-1]
59. tgif1 ENSDARG00000059337 4020 1.498 - 0.756 - 0.742 - - - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
60. ash2l ENSDARG00000060392 4916 1.497 - - - 0.715 - - - - 0.782 ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
61. pik3cb ENSDARG00000075253 2075 1.493 - - - - - - 0.730 0.763 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
62. ANKRD11 ENSDARG00000051886 10024 1.493 - 0.780 - - - - 0.713 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
63. arhgef4 ENSDARG00000012914 1464 1.492 - - - - - 0.715 0.777 - - Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
64. ppp2r2d ENSDARG00000102009 5710 1.489 - - - 0.729 - 0.760 - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
65. arhgef18a ENSDARG00000011157 1702 1.488 - - - - - 0.775 0.713 - - rho/rac guanine nucleotide exchange factor (GEF) 18a [Source:ZFIN;Acc:ZDB-GENE-040516-14]
66. paip2b ENSDARG00000008706 4255 1.487 - 0.728 - - - - 0.759 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
67. slc35d2 ENSDARG00000089837 1606 1.485 - - - - - 0.708 0.777 - - solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2 [Source:ZFIN;Acc:ZDB-GENE-080125-1]
68. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.484 - - - - - - 0.738 - 0.746 tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
69. ccbl1 702 1.48 - - - - - 0.720 0.760 - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
70. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 1.48 - - - - 0.714 0.766 - - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
71. si:ch211-197h24.9 ENSDARG00000093760 168 1.479 - - - - - 0.755 0.724 - - si:ch211-197h24.9 [Source:ZFIN;Acc:ZDB-GENE-031116-15]
72. inip ENSDARG00000028523 1925 1.476 - - - - - 0.762 0.714 - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
73. FP085405.1 FP085405.1 5189 1.474 - - 0.708 - - - 0.766 - -
74. tle2 5014 1.47 - - - 0.719 0.751 - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
75. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.47 - - 0.766 - 0.704 - - - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
76. si:dkey-100n23.5 ENSDARG00000086911 427 1.466 - - - - - 0.737 0.729 - - si:dkey-100n23.5 [Source:ZFIN;Acc:ZDB-GENE-070912-347]
77. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.459 - - - - 0.714 - - 0.745 - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
78. trrap ENSDARG00000100623 3429 1.459 - - 0.734 0.725 - - - - - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
79. cdc34b ENSDARG00000012627 3879 1.457 - 0.705 - - - - 0.752 - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
80. wdr5 ENSDARG00000016903 4834 1.454 - - - 0.747 0.707 - - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
81. dvl3a ENSDARG00000015707 1132 1.453 - 0.712 - - - - 0.741 - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
82. gpx3 ENSDARG00000043342 101 1.451 - - - - - 0.712 0.739 - - glutathione peroxidase 3 [Source:ZFIN;Acc:ZDB-GENE-070222-3]
83. drap1 ENSDARG00000041203 6749 1.45 - 0.712 - - 0.738 - - - - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
84. asf1bb ENSDARG00000043713 2340 1.448 - - - - 0.725 - 0.723 - - anti-silencing function 1Bb histone chaperone [Source:ZFIN;Acc:ZDB-GENE-040426-2594]
85. idh3b ENSDARG00000044753, ENSDARG00000110992 3965 1.448 - - - - - 0.708 0.740 - - isocitrate dehydrogenase 3 (NAD+) beta [Source:ZFIN;Acc:ZDB-GENE-040625-174]
86. g2e3 ENSDARG00000001313 1485 1.431 - 0.715 - - - - - - 0.716 G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
87. cul4b ENSDARG00000060510 6053 1.43 - - - - - - 0.715 0.715 - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
88. atf7ip ENSDARG00000069619 5495 1.429 - - - - 0.708 0.721 - - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
89. sh3pxd2b ENSDARG00000103251 1469 1.428 - 0.702 - - - - 0.726 - - SH3 and PX domains 2B [Source:ZFIN;Acc:ZDB-GENE-060810-52]
90. csrp2bp 2642 1.417 - - - - 0.706 0.711 - - - csrp2 binding protein
91. grb2b ENSDARG00000038059 9050 1.41 - - - - - 0.707 0.703 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
92. supt6h ENSDARG00000006524 3221 1.402 - - 0.701 - - - 0.701 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
93. dock7 ENSDARG00000078675 1995 0.964 - - - - - - - 0.964 - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
94. prkag1 ENSDARG00000003818 2800 0.96 - - - - - - - 0.960 - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
95. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 0.958 - - - - - - - 0.958 - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
96. phf12a ENSDARG00000074303 1025 0.958 - - - - - - - 0.958 - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
97. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 0.956 - - - - - - - 0.956 - UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
98. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 0.953 - - - - - - - 0.953 - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
99. smad7 ENSDARG00000016858 1660 0.951 - - - - - - - 0.951 - SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
100. gltscr1l gltscr1l 782 0.949 - - - - - - - 0.949 -

There are 1482 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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