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Results for smc1al

Gene Name Gene ID Reads Annotation
smc1al ENSDARG00000058203 8838 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]










Genes with expression patterns similar to smc1al

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smc1al ENSDARG00000058203 8838 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
2. hmgb3a ENSDARG00000056725 15668 3.896 0.762 - - - - 0.811 0.728 0.720 0.875 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
3. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 3.849 0.743 0.777 0.769 - - 0.855 - - 0.705 O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
4. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 3.795 - - 0.767 - 0.807 0.706 0.748 - 0.767 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
5. hdac1 ENSDARG00000015427 19804 3.325 0.751 - 0.826 - - 0.848 - - 0.900 histone deacetylase 1 [Source:ZFIN;Acc:ZDB-GENE-020419-32]
6. hmgb1b ENSDARG00000030479 10398 3.295 - - 0.831 0.988 - 0.772 0.704 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
7. prmt1 ENSDARG00000010246 11311 3.282 0.876 - 0.806 - - 0.765 0.835 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
8. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 3.248 0.702 - 0.854 - 0.921 0.771 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
9. stmn1a ENSDARG00000004169 21169 3.22 0.729 - - - 0.870 - 0.843 - 0.778 stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
10. ubtf ENSDARG00000035066 4070 3.214 0.706 - - - 0.945 0.844 0.719 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
11. kif22 ENSDARG00000102624 3694 3.192 - - 0.812 - - 0.808 0.778 - 0.794 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
12. SERBP1 SERBP1 9276 3.177 - 0.737 - 0.996 - 0.717 0.727 - -
13. uba1 ENSDARG00000037559 11579 3.171 0.800 0.739 - - - 0.864 0.768 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
14. arid1aa ENSDARG00000101710 3644 3.164 - 0.755 0.754 - - 0.837 - - 0.818 AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
15. fam60al 2846 3.134 0.746 - 0.768 - - 0.762 - - 0.858 family with sequence similarity 60, member A, like
16. lypla2 ENSDARG00000053656 8971 3.117 - 0.734 - - - 0.854 0.771 - 0.758 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
17. tmpob ENSDARG00000022978 8121 3.096 0.735 - 0.873 - - - 0.704 - 0.784 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
18. elof1 ENSDARG00000099453 6176 3.08 0.724 0.802 0.766 - - - 0.788 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
19. TAF15 ENSDARG00000070019 5102 3.059 - 0.756 0.763 - - 0.704 - - 0.836 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
20. snrpf ENSDARG00000105037 10241 3.03 0.721 0.768 - - - 0.740 0.801 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
21. rbb4l ENSDARG00000015208 5542 3.023 - 0.756 0.747 - - 0.788 0.732 - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
22. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 3.015 - - 0.738 - 0.807 - 0.722 - 0.748 RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
23. MKI67 ENSDARG00000091150 11038 3.012 0.786 - - - - - 0.725 0.769 0.732 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
24. smarcd1 ENSDARG00000019004 6028 3.005 - 0.738 - - - 0.752 0.744 - 0.771 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
25. dnmt3b dnmt3b 2522 2.976 - 0.707 0.759 - - 0.726 - - 0.784
26. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.948 0.719 - - - - 0.746 0.746 - 0.737 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
27. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.651 - - - 0.993 - - 0.804 - 0.854 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
28. prpf40a ENSDARG00000058467 6565 2.583 - - - 0.995 - 0.771 - - 0.817 PRP40 pre-mRNA processing factor 40 homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-274]
29. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 2.563 - - - - 0.910 - 0.780 - 0.873 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
30. snrnp70 ENSDARG00000077126 5921 2.555 - - 0.797 - 0.936 0.822 - - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
31. tuba1c ENSDARG00000055216 8384 2.538 - - - 0.994 - 0.739 - - 0.805 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
32. boc ENSDARG00000074335 4832 2.512 - - - - 0.926 - 0.838 0.748 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
33. rbb4 rbb4 15541 2.508 - - 0.820 - - - 0.798 - 0.890
34. whsc1l1 8544 2.484 - - - - - 0.813 0.770 - 0.901 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
35. gap43 ENSDARG00000099744 4114 2.482 - - - 0.990 - 0.741 - - 0.751 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
36. nono ENSDARG00000020482, ENSDARG00000115783 12482 2.481 - 0.782 - - - 0.878 - - 0.821 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
37. CPEB2 ENSDARG00000052604 2646 2.477 - - - - 0.912 0.729 0.836 - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
38. apex1 ENSDARG00000045843 6345 2.474 0.763 - 0.765 - 0.946 - - - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
39. AGO1 ENSDARG00000092644 4521 2.465 - - 0.750 0.993 - - - - 0.722 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
40. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 2.445 - - 0.769 - - 0.755 - - 0.921 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
41. rqcd1 2301 2.443 - 0.777 - - 0.921 0.745 - - - RCD1 required for cell differentiation1 homolog (S. pombe)
42. CREBZF ENSDARG00000089787 4261 2.438 - - - - - 0.789 0.815 - 0.834 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
43. hnrnpub ENSDARG00000004735 16496 2.432 0.725 - - - - 0.772 - - 0.935 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
44. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 2.432 - - - - 0.921 0.748 - - 0.763 protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
45. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 2.42 - - - - 0.931 - - 0.723 0.766 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
46. nkain1 ENSDARG00000006859 1961 2.416 - - - - 0.921 0.730 - - 0.765 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
47. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 2.412 - 0.704 - 0.993 - 0.715 - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
48. HNRNPAB HNRNPAB 22267 2.411 - - - - 0.726 - 0.819 - 0.866
49. bcl11ab ENSDARG00000063153 3032 2.409 - - - - - 0.760 0.817 - 0.832 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
50. sumo3a ENSDARG00000028119 13447 2.409 - - - - - 0.863 0.707 - 0.839 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
51. smarca5 ENSDARG00000052348 15433 2.405 - - - - - 0.760 0.792 - 0.853 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
52. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 2.394 - - 0.756 - - 0.823 0.815 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
53. khsrp ENSDARG00000026489 15738 2.39 - - - - - 0.873 0.767 - 0.750 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
54. tgif1 ENSDARG00000059337 4020 2.384 - - 0.770 - 0.825 - - - 0.789 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
55. MAP4K4 ENSDARG00000098670 4665 2.367 - - 0.748 - - 0.767 - - 0.852 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
56. zbtb18 ENSDARG00000028228 3653 2.361 - 0.712 - - - 0.831 - - 0.818 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
57. wu:fb17g07 wu:fb17g07 10567 2.355 0.846 - - - - 0.775 - - 0.734
58. TNKS TNKS 2775 2.354 - - - - - 0.866 0.725 - 0.763
59. rnf44 ENSDARG00000068582 1612 2.346 - - 0.716 - 0.880 - - - 0.750 ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
60. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 2.339 0.761 - - - - 0.852 0.726 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
61. ppm1g ENSDARG00000075559 6516 2.331 0.738 - - - - - - 0.714 0.879 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
62. u2af1 ENSDARG00000015325 3217 2.33 0.744 - - - - 0.763 - - 0.823 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
63. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.327 0.758 - 0.735 - - - - - 0.834 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
64. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.327 - - 0.806 - - 0.813 0.708 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
65. foxp4 ENSDARG00000076120 9458 2.326 0.769 - 0.786 - - 0.771 - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
66. AP3B2 1874 2.32 - - - - 0.795 0.734 - - 0.791 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
67. FNBP4 ENSDARG00000051800 2839 2.319 - - 0.757 - - 0.765 - - 0.797 formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
68. rhoaa ENSDARG00000026845 6900 2.319 - - - - 0.798 0.778 - - 0.743 ras homolog gene family, member Aa [Source:ZFIN;Acc:ZDB-GENE-040426-2150]
69. nup205 ENSDARG00000042530, ENSDARG00000114489 2255 2.318 - - - - - 0.792 0.761 - 0.765 nucleoporin 205 [Source:ZFIN;Acc:ZDB-GENE-040715-8]
70. elavl1 11672 2.317 - - 0.720 - 0.809 0.788 - - - ELAV like RNA binding protein 1, transcript variant X3
71. CYTH2 ENSDARG00000028800 2349 2.317 - - 0.763 - - 0.782 - - 0.772 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
72. ncl ENSDARG00000002710 16951 2.315 - 0.708 - - 0.792 - - - 0.815 nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
73. CR936437.1 CR936437.1 6465 2.315 0.715 - 0.814 - - - - - 0.786
74. sf1 ENSDARG00000008188 5142 2.312 - - 0.779 - - - 0.740 - 0.793 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
75. ANKRD11 ENSDARG00000051886 10024 2.311 0.730 - 0.783 - - 0.798 - - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
76. arnt2 ENSDARG00000103697 5731 2.309 - - 0.802 - - 0.756 - - 0.751 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
77. tmsb ENSDARG00000054911 6411 2.304 0.815 - - - - 0.776 - - 0.713 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
78. scaf1 ENSDARG00000054010 3752 2.294 - - 0.750 - - - 0.834 - 0.710 SR-related CTD-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-120215-214]
79. rbpjb ENSDARG00000052091 3122 2.293 - - 0.803 - - 0.703 - - 0.787 recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
80. usp7 ENSDARG00000073710 7017 2.292 - - 0.752 - - - 0.778 - 0.762 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
81. fen1 ENSDARG00000011404 3358 2.287 - - 0.783 - - - 0.790 - 0.714 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
82. marcksl1b ENSDARG00000035715 37390 2.285 0.742 - - - - - - 0.706 0.837 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
83. puf60a ENSDARG00000032175 5618 2.284 - - 0.719 - - - 0.743 - 0.822 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
84. jarid2b ENSDARG00000062268 2206 2.282 - - 0.751 - - 0.750 - - 0.781 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
85. mllt10 ENSDARG00000045401 7557 2.28 0.760 - - - - 0.783 0.737 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
86. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 2.28 - - - - - 0.736 0.729 - 0.815 pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
87. kansl1a ENSDARG00000090895 2593 2.276 - - 0.742 - - - 0.793 - 0.741 KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
88. psmd8 ENSDARG00000020454 6645 2.276 - 0.821 - - - - 0.744 - 0.711 proteasome 26S subunit, non-ATPase 8 [Source:ZFIN;Acc:ZDB-GENE-040625-136]
89. akirin2 ENSDARG00000058729 13245 2.273 - - - - - 0.781 0.790 - 0.702 akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
90. polr2a ENSDARG00000099966 5706 2.272 - 0.749 0.788 - - 0.735 - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
91. slbp ENSDARG00000100558 3405 2.258 - 0.728 0.813 - - - 0.717 - - stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
92. snrpd3l ENSDARG00000076283 7655 2.256 - - - - - 0.717 0.711 - 0.828 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
93. srrm1 ENSDARG00000001244 4972 2.252 - - 0.762 - - - 0.741 - 0.749 serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
94. phf21ab ENSDARG00000021378 1706 2.251 - 0.755 0.746 - - - - - 0.750 PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
95. fzd3a ENSDARG00000021664 1958 2.249 - - 0.759 - - 0.703 - - 0.787 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
96. pou3f3a ENSDARG00000042032 2835 2.248 0.753 - - - - 0.743 - - 0.752 POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
97. stau1 ENSDARG00000044182, ENSDARG00000115476 6121 2.247 0.723 - - - - 0.758 0.766 - - staufen double-stranded RNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6372]
98. gipc1 ENSDARG00000104483 2913 2.246 0.729 - 0.798 - - 0.719 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
99. PRTG PRTG 4714 2.246 0.768 0.734 - - - 0.744 - - -
100. pcdh1gc5 ENSDARG00000104826 10052 2.24 0.704 - 0.759 - - 0.777 - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]

There are 1852 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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