Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smc1a

Gene Name Gene ID Reads Annotation
smc1a ENSDARG00000055754 62 structural maintenance of chromosomes 1A [Source:ZFIN;Acc:ZDB-GENE-090506-9]










Genes with expression patterns similar to smc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smc1a ENSDARG00000055754 62 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 structural maintenance of chromosomes 1A [Source:ZFIN;Acc:ZDB-GENE-090506-9]
2. si:dkey-234k7.2 si:dkey-234k7.2 4 1.86 - - 1.000 0.860 - - - - -
3. wisp3 ENSDARG00000071048 15 1.739 - - 0.989 0.750 - - - - - WNT1 inducible signaling pathway protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-86]
4. si:dkey-117n7.4 ENSDARG00000092064 22 1.686 - - 0.795 0.891 - - - - - si:dkey-117n7.4 [Source:ZFIN;Acc:ZDB-GENE-060503-237]
5. scara3 ENSDARG00000008060 169 1.647 - - 0.934 - - - 0.713 - - scavenger receptor class A, member 3 [Source:ZFIN;Acc:ZDB-GENE-041014-317]
6. INSM2 ENSDARG00000020655 122 1.626 - - - - - 0.897 0.729 - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
7. CABZ01109624.1 CABZ01109624.1 25 1.625 - - - 0.860 - 0.765 - - -
8. BEGAIN BEGAIN 39 1.605 - - - - - 0.897 0.708 - -
9. C6H22orf23 C6H22orf23 15 1.585 - - 0.877 - - - 0.708 - -
10. abcg4a ENSDARG00000061047 56 1.561 - - - - - - 0.776 - 0.785 ATP-binding cassette, sub-family G (WHITE), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-39]
11. BX247898.1 BX247898.1 75 1.559 - - - - - 0.811 0.748 - -
12. zgc:114037_4 57 1.541 - - - - - 0.712 0.829 - - zgc:114037
13. WDR63 ENSDARG00000105093 13 1.537 - - - 0.829 - - 0.708 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
14. nkx2.9 ENSDARG00000020332 357 1.527 - - - - - 0.709 0.818 - - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
15. zgc:158654 19 1.524 - - 0.793 - - - 0.731 - - zgc:158654, transcript variant X1
16. FTL FTL 53 1.522 - - 0.737 - - - 0.785 - -
17. gfra3 ENSDARG00000087704 122 1.517 - - - - - 0.801 0.716 - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
18. olig2 ENSDARG00000040946 1405 1.504 - - - - - 0.741 0.763 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
19. C2CD4A ENSDARG00000061416 61 1.465 - - - - - 0.715 0.750 - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
20. ugt2b5 ugt2b5 17 1 - - 1.000 - - - - - -
21. CCDC87 ENSDARG00000045683 27 1 - - 1.000 - - - - - - coiled-coil domain containing 87 [Source:ZFIN;Acc:ZDB-GENE-041210-118]
22. tekt3 ENSDARG00000045038 9 1 - - 1.000 - - - - - - tektin 3 [Source:ZFIN;Acc:ZDB-GENE-080130-2]
23. eif3bb ENSDARG00000074213 2 1 - - 1.000 - - - - - - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
24. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - 1.000 - - - - - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
25. grin2ab ENSDARG00000070543 31 1 - - 1.000 - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b [Source:ZFIN;Acc:ZDB-GENE-070424-223]
26. olfcg2 ENSDARG00000101083 8 1 - - 1.000 - - - - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
27. ANKRD27 ENSDARG00000089207 3 1 - - 1.000 - - - - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
28. FER1L6 ENSDARG00000019316 5 1 - - 1.000 - - - - - - fer-1-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-312]
29. ugt5b3 ENSDARG00000099276 2 1 - - 1.000 - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B3 [Source:ZFIN;Acc:ZDB-GENE-100406-5]
30. f13b ENSDARG00000101353 2 1 - - 1.000 - - - - - - coagulation factor XIII, B polypeptide [Source:ZFIN;Acc:ZDB-GENE-050208-701]
31. CABZ01069239.1 CABZ01069239.1 1 1 - - 1.000 - - - - - -
32. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - - 1.000 - - - - - -
33. si:dkey-10o6.2 ENSDARG00000074628 22 0.987 - - 0.987 - - - - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
34. DDO_1 DDO_1 5 0.987 - - 0.987 - - - - - -
35. si:dkey-1b17.11 si:dkey-1b17.11 3 0.978 - - 0.978 - - - - - -
36. ahsg ahsg 39 0.976 - - 0.976 - - - - - -
37. atp1b2b ENSDARG00000034424, ENSDARG00000113354 56 0.971 - - 0.971 - - - - - - ATPase Na+/K+ transporting subunit beta 2b [Source:ZFIN;Acc:ZDB-GENE-010718-1]
38. BX005329.1 ENSDARG00000090694 2 0.963 - - 0.963 - - - - - -
39. C14orf80 C14orf80 20 0.96 - - 0.960 - - - - - -
40. hspb3 ENSDARG00000067714, ENSDARG00000116486 83 0.956 - - 0.956 - - - - - - heat shock protein, alpha-crystallin-related, b3 [Source:ZFIN;Acc:ZDB-GENE-070705-338]
41. rpph1 33 0.945 - - - - - 0.945 - - - ribonuclease P RNA component H1
42. si:ch211-225p5.3 si:ch211-225p5.3 10 0.945 - - - - - 0.945 - - -
43. klf5b ENSDARG00000062106 7 0.945 - - - - - 0.945 - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
44. lepa ENSDARG00000091085 11 0.945 - - - - - 0.945 - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
45. spata20 ENSDARG00000013880 46 0.945 - - - - - 0.945 - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
46. si:dkey-249p7.4 ENSDARG00000096663 9 0.945 - - - - - 0.945 - - - si:dkey-249p7.4 [Source:ZFIN;Acc:ZDB-GENE-121214-270]
47. DNAJC30 DNAJC30 47 0.945 - - 0.945 - - - - - -
48. pde4ca ENSDARG00000013221, ENSDARG00000112137 3 0.945 - - - - - 0.945 - - - phosphodiesterase 4C, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-070912-373]
49. CABZ01078767.1 ENSDARG00000117816 10 0.945 - - - - - 0.945 - - -
50. vap ENSDARG00000093053, ENSDARG00000100949 6 0.943 - - 0.943 - - - - - - vascular associated protein [Source:ZFIN;Acc:ZDB-GENE-090313-42]
51. zgc:162879 ENSDARG00000074163 6 0.939 - - 0.939 - - - - - - zgc:162879 [Source:ZFIN;Acc:ZDB-GENE-070424-92]
52. ENSDARG00000054233 ENSDARG00000054233 4 0.939 - - 0.939 - - - - - -
53. mob1a_1 ENSDARG00000102320, ENSDARG00000111884, ENSDARG00000116249 91 0.938 - - 0.938 - - - - - - MOB kinase activator 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6506]
54. lenep ENSDARG00000095553 11 0.938 - - 0.938 - - - - - - lens epithelial protein [Source:ZFIN;Acc:ZDB-GENE-060130-3]
55. CABZ01030262.1 CABZ01030262.1 11 0.936 - - 0.936 - - - - - -
56. exo1 ENSDARG00000056832, ENSDARG00000112534 186 0.934 - - - - - - 0.934 - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
57. tmem240 tmem240 180 0.93 - - - - - - 0.930 - -
58. zgc:153654 ENSDARG00000060322 9 0.929 - - 0.929 - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
59. gpr55a ENSDARG00000043447 12 0.927 - - 0.927 - - - - - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
60. CU856207.1 CU856207.1 87 0.92 - - 0.920 - - - - - -
61. BX927237.2 BX927237.2 16 0.912 - - 0.912 - - - - - -
62. EFEMP1 32 0.906 - - 0.906 - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
63. pde4cb ENSDARG00000002411 63 0.902 - - - - - 0.902 - - - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
64. gyg2 ENSDARG00000033380 12 0.9 - - 0.900 - - - - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
65. SCYL1 ENSDARG00000079854 78 0.899 - - 0.899 - - - - - - SCY1-like, kinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8915]
66. PARP14 PARP14 164 0.898 - - - - - - 0.898 - -
67. BX537277.3 ENSDARG00000117762 1 0.897 - - - - - 0.897 - - -
68. ZSWIM2 ENSDARG00000075700 8 0.897 - - - - - 0.897 - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
69. si:dkey-13n15.11 ENSDARG00000078002 8 0.897 - - - - - 0.897 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
70. BX571880.1 ENSDARG00000097533 499 0.897 - - - - - 0.897 - - -
71. C22H19orf10_1 C22H19orf10_1 30 0.897 - - - - - 0.897 - - -
72. BTBD17 BTBD17 53 0.897 - - - - - 0.897 - - -
73. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 0.897 - - - - - 0.897 - - - si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
74. SOX8 SOX8 22 0.897 - - - - - 0.897 - - -
75. tph1a ENSDARG00000029432, ENSDARG00000114918 24 0.897 - - - - - 0.897 - - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
76. si:ch211-153f2.3 ENSDARG00000098980 66 0.897 - - - - - 0.897 - - - si:ch211-153f2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-135]
77. vtg5 ENSDARG00000092126, ENSDARG00000113031 3 0.897 - - - - - 0.897 - - - vitellogenin 5 [Source:ZFIN;Acc:ZDB-GENE-001201-4]
78. PGBD4 ENSDARG00000079328 20 0.897 - - - - - 0.897 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
79. EDN3_1 EDN3_1 24 0.897 - - - - - 0.897 - - -
80. si:dkey-263b2.2 si:dkey-263b2.2 1 0.897 - - - - - 0.897 - - -
81. CHST8 23 0.897 - - - - - 0.897 - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8, transcript variant X1
82. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 0.897 - - - - - 0.897 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
83. CR392036.1 ENSDARG00000069895 1 0.897 - - - - - 0.897 - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101884429]
84. si:ch211-114l13.3 ENSDARG00000094346 2 0.897 - - - - - 0.897 - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
85. CR936977.1 ENSDARG00000100144 4 0.897 - - - - - 0.897 - - -
86. rbbp9 ENSDARG00000040713 12 0.897 - - - - - 0.897 - - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
87. si:ch211-241n15.3 ENSDARG00000088915 5 0.897 - - - - - 0.897 - - - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
88. CU681842.2 CU681842.2 1 0.897 - - - - - 0.897 - - -
89. cbln10 ENSDARG00000023157 17 0.897 - - - - - 0.897 - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
90. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 0.897 - - - - - 0.897 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
91. BX323793.4 BX323793.4 8 0.897 - - - - - 0.897 - - -
92. nfixa ENSDARG00000043226 14 0.897 - - - - - 0.897 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
93. si:rp71-23d18.4 ENSDARG00000092779 1 0.897 - - - - - 0.897 - - - si:rp71-23d18.4 [Source:ZFIN;Acc:ZDB-GENE-050208-761]
94. pde5ab ENSDARG00000051915 18 0.897 - - - - - 0.897 - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
95. smarcd3b ENSDARG00000019969 11 0.897 - - - - - 0.897 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
96. CABZ01074298.1 ENSDARG00000087767 6 0.897 - - - - - 0.897 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
97. ssh1b ENSDARG00000010031 4 0.897 - - - - - 0.897 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
98. RAB1B RAB1B 20 0.897 - - - - - 0.897 - - -
99. si:ch211-188c16.1 ENSDARG00000077288 16 0.897 - - - - - 0.897 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
100. caps2 ENSDARG00000058486 4 0.897 - - - - - 0.897 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]

There are 545 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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