Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smarcd3b

Gene Name Gene ID Reads Annotation
smarcd3b ENSDARG00000019969 11 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]










Genes with expression patterns similar to smarcd3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smarcd3b ENSDARG00000019969 11 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
2. CU896555.1 CU896555.1 27 2.593 - 0.809 - 0.784 - 1.000 - - -
3. TRIM14_8 TRIM14_8 5 2 1.000 - - - - - - 1.000 -
4. MDH1B ENSDARG00000018008 29 2 1.000 - - - - 1.000 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
5. ONECUT3 ONECUT3 2 2 1.000 - - - - - - - 1.000
6. diaph3 ENSDARG00000090785 16 2 - - - 1.000 - - - - 1.000 diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
7. Metazoa_SRP_5 Metazoa_SRP_5 2 2 - - - - - 1.000 - - 1.000
8. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 2 1.000 - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
9. C12H10orf107 C12H10orf107 8 2 - 1.000 - 1.000 - - - - -
10. ttll3 ENSDARG00000053728 7 1.973 - 0.973 - - - - - - 1.000 tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
11. slc23a2 ENSDARG00000017365, ENSDARG00000114446 6 1.97 - - - 0.970 - - - 1.000 - solute carrier family 23 (ascorbic acid transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-090521-3]
12. LPL ENSDARG00000087697 18 1.969 1.000 - - 0.969 - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
13. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.969 - 0.969 - - - 1.000 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
14. si:dkey-242e21.3 ENSDARG00000075723 77 1.94 - 0.940 - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
15. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1.932 - 1.000 - 0.932 - - - - -
16. CTBP2 CTBP2 19 1.894 1.000 0.894 - - - - - - -
17. CU633477.1 CU633477.1 19 1.893 1.000 - - 0.893 - - - - -
18. ZNF423 ENSDARG00000059707 11 1.86 0.860 1.000 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
19. MAPK8IP1 MAPK8IP1 121 1.852 0.866 - - - - 0.986 - - -
20. lrrcc1 ENSDARG00000078535 118 1.852 0.860 0.992 - - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
21. si:dkey-26i13.8 ENSDARG00000062606 13 1.847 - - - - - 0.847 - - 1.000 si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
22. CCDC141 ENSDARG00000095675 94 1.824 - 0.846 - 0.978 - - - - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
23. EP400 ENSDARG00000100965 45 1.819 - 0.819 - - - 1.000 - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
24. BX511266.1 BX511266.1 21 1.807 - 1.000 - 0.807 - - - - -
25. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1.779 0.779 - - - - 1.000 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
26. TMEM132B TMEM132B 2 1.768 - 1.000 - - 0.768 - - - -
27. soul5l ENSDARG00000089879 20 1.766 - 1.000 - - 0.766 - - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
28. rfxank ENSDARG00000016730 12 1.762 - 1.000 - - - - - 0.762 - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
29. cryba1l2 ENSDARG00000014803 47 1.758 - - 0.758 - - 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
30. gda ENSDARG00000002986 9 1.754 - 1.000 - - 0.754 - - - - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
31. HTR7 17 1.752 - - - 0.992 - - - - 0.760 5-hydroxytryptamine receptor 7
32. CABZ01085979.1 CABZ01085979.1 4 1.751 - - - 0.969 0.782 - - - -
33. GMNC ENSDARG00000068719 28 1.747 1.000 0.747 - - - - - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
34. PCOLCE PCOLCE 25 1.74 - 1.000 - 0.740 - - - - -
35. mipa ENSDARG00000037285, ENSDARG00000116133 507 1.724 - 1.000 - - - 0.724 - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
36. guk1b ENSDARG00000005776 23 1.724 1.000 - - - - 0.724 - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
37. BX323448.1 ENSDARG00000116236 10 1.71 - 1.000 - - 0.710 - - - -
38. zgc:193801 ENSDARG00000076552 37 1.699 0.809 - - 0.890 - - - - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
39. BX322657.1 ENSDARG00000102448 23 1.656 0.860 - - 0.796 - - - - -
40. setmar ENSDARG00000074836 29 1.649 - 0.809 - - - - - 0.840 - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
41. si:dkey-122c11.1 ENSDARG00000093747 19 1.642 - - - 0.782 - - - 0.860 - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
42. MPV17L MPV17L 39 1.624 - - - - 0.747 0.877 - - -
43. tceb3 40 1.596 - 0.889 - 0.707 - - - - - transcription elongation factor B (SIII), polypeptide 3
44. CABZ01021538.1 CABZ01021538.1 67 1.583 0.824 - - - - 0.759 - - -
45. si:dkey-24g18.3 si:dkey-24g18.3 60 1.582 0.706 0.876 - - - - - - -
46. sycp2 ENSDARG00000088950 3 1.562 - - - - - - - 0.756 0.806 synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
47. isg20l2 ENSDARG00000102266 167 1.545 - 0.798 - - - 0.747 - - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
48. MPP3 MPP3 13 1.531 0.809 - - - - - - 0.722 -
49. ehf ENSDARG00000052115, ENSDARG00000112589 24 1.53 0.724 0.806 - - - - - - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
50. nkx2.2a ENSDARG00000053298 747 1.528 0.763 - - - - 0.765 - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
51. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 1.525 - - - 0.801 - 0.724 - - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
52. robo4 ENSDARG00000009387 98 1.447 0.706 - - - - 0.741 - - - roundabout, axon guidance receptor, homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020809-1]
53. rereb ENSDARG00000075670 136 1.409 0.705 - - 0.704 - - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
54. si:dkey-3h3.3 ENSDARG00000067718 225 1 1.000 - - - - - - - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
55. CABZ01044346.1 CABZ01044346.1 12 1 - - - - - - - 1.000 -
56. taar18d ENSDARG00000054252 3 1 - - - - - 1.000 - - - trace amine associated receptor 18d [Source:ZFIN;Acc:ZDB-GENE-060413-12]
57. MTUS2 MTUS2 1 1 - 1.000 - - - - - - -
58. CCDC83 ENSDARG00000077179 29 1 - 1.000 - - - - - - - coiled-coil domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-130723-1]
59. lars2 ENSDARG00000075337 31 1 1.000 - - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
60. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - 1.000 - - - - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
61. trhra ENSDARG00000076546 3 1 1.000 - - - - - - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
62. rln3a ENSDARG00000070780 2 1 - - - - - - - - 1.000 relaxin 3a [Source:ZFIN;Acc:ZDB-GENE-050310-3]
63. CABZ01111953.1 ENSDARG00000099747 38 1 - 1.000 - - - - - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
64. PACS1_2 PACS1_2 0 1 - - - - - - - - 1.000
65. CU464087.2 CU464087.2 15 1 - - - - - 1.000 - - -
66. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 1.000 - - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
67. si:ch211-114l13.3 ENSDARG00000094346 2 1 - - - - - 1.000 - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
68. IMPG2_1 IMPG2_1 2 1 - - - - - - - - 1.000
69. cdk20 ENSDARG00000003867 27 1 1.000 - - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
70. cxcr3.1_1 ENSDARG00000007358, ENSDARG00000078177, ENSDARG00000111607 0 1 - - - - - - - - 1.000 chemokine (C-X-C motif) receptor 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060130-38]
71. zgc:173443 ENSDARG00000034403 26 1 - - - - - 1.000 - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
72. HELZ2 ENSDARG00000012600 2 1 - - - - - - - - 1.000 helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
73. FAM131A ENSDARG00000077022 3 1 - - - - - - - - 1.000 family with sequence similarity 131, member A [Source:ZFIN;Acc:ZDB-GENE-080204-112]
74. si:dkey-220o21.2 si:dkey-220o21.2 19 1 - 1.000 - - - - - - -
75. GRM5 GRM5 4 1 - - - - - - - - 1.000
76. cacna1f cacna1f 1 1 - - - - - - - - 1.000
77. si:dkey-176f19.5 si:dkey-176f19.5 10 1 1.000 - - - - - - - -
78. si:ch73-92e7.6 ENSDARG00000094309 0 1 - - - - - - - - 1.000 si:ch73-92e7.6 [Source:ZFIN;Acc:ZDB-GENE-081031-35]
79. ARMC6 ENSDARG00000103770 39 1 1.000 - - - - - - - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
80. edil3 edil3 24 1 - 1.000 - - - - - - -
81. CR394546.1 ENSDARG00000077602 1 1 - 1.000 - - - - - - -
82. ssh1b ENSDARG00000010031 4 1 - - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
83. CHST8 23 1 - - - - - 1.000 - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8, transcript variant X1
84. pik3r5 ENSDARG00000102762 56 1 1.000 - - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
85. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
86. ttc25 ENSDARG00000058140 2 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
87. mir199-2 mir199-2 38 1 - 1.000 - - - - - - -
88. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - - - 1.000 - - - - -
89. smad6b ENSDARG00000031763 12 1 1.000 - - - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
90. v2rl1 ENSDARG00000005942 1 1 - - - - - - - - 1.000 vomeronasal 2 receptor, l1 [Source:ZFIN;Acc:ZDB-GENE-050419-65]
91. caps2 ENSDARG00000058486 4 1 - - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
92. ak7b ENSDARG00000017023 25 1 - - - - - - - - 1.000 adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
93. si:ch211-217k17.3 si:ch211-217k17.3 2 1 - - - - - - - - 1.000
94. DNAI2 DNAI2 6 1 - - - - - 1.000 - - -
95. try 21 1 - - - - - - - - 1.000 trypsin
96. pcdh1g2 ENSDARG00000101232 5 1 - - - - - 1.000 - - - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
97. zgc:136639os zgc:136639os 2 1 - - - - - - - - 1.000
98. CABZ01078124.1 CABZ01078124.1 4 1 - 1.000 - - - - - - -
99. ENSDARG00000006874 ENSDARG00000006874 3 1 - 1.000 - - - - - - -
100. BX511061.2 BX511061.2 30 1 1.000 - - - - - - - -

There are 1086 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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