Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smarcd3b

Gene Name Gene ID Reads Annotation
smarcd3b ENSDARG00000019969 11 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]










Genes with expression patterns similar to smarcd3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smarcd3b ENSDARG00000019969 11 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
2. CU896555.1 CU896555.1 27 2.593 - 0.809 - 0.784 - 1.000 - - -
3. ONECUT3 ONECUT3 2 2 1.000 - - - - - - - 1.000
4. TRIM14_8 TRIM14_8 5 2 1.000 - - - - - - 1.000 -
5. Metazoa_SRP_5 Metazoa_SRP_5 2 2 - - - - - 1.000 - - 1.000
6. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 2 1.000 - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
7. MDH1B ENSDARG00000018008 29 2 1.000 - - - - 1.000 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
8. diaph3 ENSDARG00000090785 16 2 - - - 1.000 - - - - 1.000 diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
9. C12H10orf107 C12H10orf107 8 2 - 1.000 - 1.000 - - - - -
10. ttll3 ENSDARG00000053728 7 1.973 - 0.973 - - - - - - 1.000 tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
11. slc23a2 ENSDARG00000017365, ENSDARG00000114446 6 1.97 - - - 0.970 - - - 1.000 - solute carrier family 23 (ascorbic acid transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-090521-3]
12. LPL ENSDARG00000087697 18 1.969 1.000 - - 0.969 - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
13. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1.969 - 0.969 - - - 1.000 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
14. si:dkey-242e21.3 ENSDARG00000075723 77 1.94 - 0.940 - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
15. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1.932 - 1.000 - 0.932 - - - - -
16. CTBP2 CTBP2 19 1.894 1.000 0.894 - - - - - - -
17. CU633477.1 CU633477.1 19 1.893 1.000 - - 0.893 - - - - -
18. ZNF423 ENSDARG00000059707 11 1.86 0.860 1.000 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
19. MAPK8IP1 MAPK8IP1 121 1.852 0.866 - - - - 0.986 - - -
20. lrrcc1 ENSDARG00000078535 118 1.852 0.860 0.992 - - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
21. si:dkey-26i13.8 ENSDARG00000062606 13 1.847 - - - - - 0.847 - - 1.000 si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
22. CCDC141 ENSDARG00000095675 94 1.824 - 0.846 - 0.978 - - - - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
23. EP400 ENSDARG00000100965 45 1.819 - 0.819 - - - 1.000 - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
24. BX511266.1 BX511266.1 21 1.807 - 1.000 - 0.807 - - - - -
25. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1.779 0.779 - - - - 1.000 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
26. TMEM132B TMEM132B 2 1.768 - 1.000 - - 0.768 - - - -
27. soul5l ENSDARG00000089879 20 1.766 - 1.000 - - 0.766 - - - - heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
28. rfxank ENSDARG00000016730 12 1.762 - 1.000 - - - - - 0.762 - regulatory factor X-associated ankyrin-containing protein [Source:ZFIN;Acc:ZDB-GENE-050208-596]
29. cryba1l2 ENSDARG00000014803 47 1.758 - - 0.758 - - 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
30. gda ENSDARG00000002986 9 1.754 - 1.000 - - 0.754 - - - - guanine deaminase [Source:ZFIN;Acc:ZDB-GENE-050522-434]
31. HTR7 17 1.752 - - - 0.992 - - - - 0.760 5-hydroxytryptamine receptor 7
32. CABZ01085979.1 CABZ01085979.1 4 1.751 - - - 0.969 0.782 - - - -
33. GMNC ENSDARG00000068719 28 1.747 1.000 0.747 - - - - - - - geminin coiled-coil domain containing [Source:ZFIN;Acc:ZDB-GENE-121211-1]
34. PCOLCE PCOLCE 25 1.74 - 1.000 - 0.740 - - - - -
35. guk1b ENSDARG00000005776 23 1.724 1.000 - - - - 0.724 - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
36. mipa ENSDARG00000037285, ENSDARG00000116133 507 1.724 - 1.000 - - - 0.724 - - - major intrinsic protein of lens fiber a [Source:ZFIN;Acc:ZDB-GENE-040801-41]
37. BX323448.1 ENSDARG00000116236 10 1.71 - 1.000 - - 0.710 - - - -
38. zgc:193801 ENSDARG00000076552 37 1.699 0.809 - - 0.890 - - - - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
39. BX322657.1 ENSDARG00000102448 23 1.656 0.860 - - 0.796 - - - - -
40. setmar ENSDARG00000074836 29 1.649 - 0.809 - - - - - 0.840 - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
41. si:dkey-122c11.1 ENSDARG00000093747 19 1.642 - - - 0.782 - - - 0.860 - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
42. MPV17L MPV17L 39 1.624 - - - - 0.747 0.877 - - -
43. tceb3 40 1.596 - 0.889 - 0.707 - - - - - transcription elongation factor B (SIII), polypeptide 3
44. CABZ01021538.1 CABZ01021538.1 67 1.583 0.824 - - - - 0.759 - - -
45. si:dkey-24g18.3 si:dkey-24g18.3 60 1.582 0.706 0.876 - - - - - - -
46. sycp2 ENSDARG00000088950 3 1.562 - - - - - - - 0.756 0.806 synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
47. isg20l2 ENSDARG00000102266 167 1.545 - 0.798 - - - 0.747 - - - interferon stimulated exonuclease gene 20-like 2 [Source:ZFIN;Acc:ZDB-GENE-070928-8]
48. MPP3 MPP3 13 1.531 0.809 - - - - - - 0.722 -
49. ehf ENSDARG00000052115, ENSDARG00000112589 24 1.53 0.724 0.806 - - - - - - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
50. nkx2.2a ENSDARG00000053298 747 1.528 0.763 - - - - 0.765 - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
51. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 1.525 - - - 0.801 - 0.724 - - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
52. robo4 ENSDARG00000009387 98 1.447 0.706 - - - - 0.741 - - - roundabout, axon guidance receptor, homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020809-1]
53. rereb ENSDARG00000075670 136 1.409 0.705 - - 0.704 - - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
54. EDN3_1 EDN3_1 24 1 - - - - - 1.000 - - -
55. CABZ01061549.1 CABZ01061549.1 17 1 1.000 - - - - - - - -
56. CR392036.1 ENSDARG00000069895 1 1 - - - - - 1.000 - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101884429]
57. BX469915.2 BX469915.2 48 1 1.000 - - - - - - - -
58. CABZ01111953.1 ENSDARG00000099747 38 1 - 1.000 - - - - - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
59. si:dkey-176g1.6 si:dkey-176g1.6 5 1 - - - - - 1.000 - - -
60. ltk ENSDARG00000042861, ENSDARG00000116109 76 1 1.000 - - - - - - - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
61. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - - - - - 1.000 - - -
62. si:ch211-286l10.2 si:ch211-286l10.2 1 1 - - - - - - - - 1.000
63. PGBD4 ENSDARG00000079328 20 1 - - - - - 1.000 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
64. kcnq3 ENSDARG00000060085 0 1 - - - - - - - - 1.000 potassium voltage-gated channel, KQT-like subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-301]
65. rs1 rs1 70 1 1.000 - - - - - - - -
66. si:ch211-153f2.3 ENSDARG00000098980 66 1 - - - - - 1.000 - - - si:ch211-153f2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-135]
67. si:ch211-239m17.2 si:ch211-239m17.2 1 1 - - - - - - - - 1.000
68. ENSDARG00000006874 ENSDARG00000006874 3 1 - 1.000 - - - - - - -
69. nfixa ENSDARG00000043226 14 1 - - - - - 1.000 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
70. DTX4_1 ENSDARG00000076302 31 1 - 1.000 - - - - - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
71. gbgt1l3 ENSDARG00000035555, ENSDARG00000091969 91 1 - 1.000 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 [Source:ZFIN;Acc:ZDB-GENE-040912-46]
72. ifnphi1 ENSDARG00000025607 6 1 - - - - - - - - 1.000 interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
73. si:dkey-26g8.5 ENSDARG00000089750 7070 1 - 1.000 - - - - - - - si:dkey-26g8.5 [Source:ZFIN;Acc:ZDB-GENE-121214-19]
74. cacna1i ENSDARG00000070522 1 1 - - - - - - - - 1.000 calcium channel, voltage-dependent, T type, alpha 1I subunit [Source:ZFIN;Acc:ZDB-GENE-060503-324]
75. smad6b ENSDARG00000031763 12 1 1.000 - - - - - - - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
76. ASCC3 ENSDARG00000086678 1 1 - 1.000 - - - - - - - activating signal cointegrator 1 complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-130214-2]
77. l3mbtl3 ENSDARG00000025983 12 1 1.000 - - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
78. SLC47A1_2 SLC47A1_2 50 1 1.000 - - - - - - - -
79. dok1a ENSDARG00000078108 9 1 - 1.000 - - - - - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
80. MTUS2 MTUS2 1 1 - 1.000 - - - - - - -
81. fgf14 ENSDARG00000040982 5 1 - - - - - 1.000 - - - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
82. CR759791.3 CR759791.3 134 1 - - - 1.000 - - - - -
83. zgc:158654 19 1 1.000 - - - - - - - - zgc:158654, transcript variant X1
84. CR936540.2 CR936540.2 4 1 - - - - - 1.000 - - -
85. rhoga ENSDARG00000068653 13 1 - - - - - 1.000 - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
86. si:dkey-189d19.1 si:dkey-189d19.1 2 1 - - - - - - - - 1.000
87. rpap3 ENSDARG00000087962 22 1 - 1.000 - - - - - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
88. CU929230.1 ENSDARG00000030665 48 1 - - - - - 1.000 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
89. si:ch211-188c16.1 ENSDARG00000077288 16 1 - - - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
90. prph2a ENSDARG00000038018 2 1 - - - - - - - - 1.000 peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
91. BX119910.11 BX119910.11 3 1 - - - - - - - - 1.000
92. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - - - - - 1.000 - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
93. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - 1.000 - - - - - - -
94. elfn2 elfn2 1 1 - - - - - - - - 1.000
95. CABZ01044346.1 CABZ01044346.1 12 1 - - - - - - - 1.000 -
96. BX571880.1 ENSDARG00000097533 499 1 - - - - - 1.000 - - -
97. si:ch211-120c15.1 si:ch211-120c15.1 20 1 1.000 - - - - - - - -
98. edil3 edil3 24 1 - 1.000 - - - - - - -
99. gpr75 ENSDARG00000098526 32 1 1.000 - - - - - - - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
100. si:dkey-88l16.5 ENSDARG00000094850 12 1 - 1.000 - - - - - - - si:dkey-88l16.5 [Source:ZFIN;Acc:ZDB-GENE-091204-332]

There are 1086 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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