Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smarcd2

Gene Name Gene ID Reads Annotation
smarcd2 ENSDARG00000088877 416 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]










Genes with expression patterns similar to smarcd2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smarcd2 ENSDARG00000088877 416 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]
2. asb13b ENSDARG00000089833 251 1.843 0.868 - - - - - - - 0.975 ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
3. C25H12orf4 C25H12orf4 317 1.826 - 0.861 - - - - - - 0.965
4. endog ENSDARG00000058865 679 1.825 - - - - - - - 0.856 0.969 endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
5. znf362 znf362 869 1.788 - - - - - - - 0.841 0.947
6. ponzr1 ENSDARG00000090444 540 1.762 - - - - - - 0.839 0.923 - plac8 onzin related protein 1 [Source:ZFIN;Acc:ZDB-GENE-070727-1]
7. slc6a6a ENSDARG00000012534 183 1.76 - - - - - - 0.789 0.971 - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
8. CASKIN2_1 CASKIN2_1 2299 1.757 - - - - - - 0.923 - 0.834
9. pemt ENSDARG00000103614 474 1.757 0.836 - - - - - - 0.921 - phosphatidylethanolamine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-719]
10. ddx27 ENSDARG00000091831 1471 1.742 - - - - - - 0.785 - 0.957 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
11. CT573103.1 ENSDARG00000097550 950 1.742 - 0.801 - - - - - 0.941 -
12. CR790363.1 ENSDARG00000097364 145 1.739 - 0.790 - - - - - 0.949 -
13. tp53i11b ENSDARG00000006025 569 1.721 - 0.749 - - - - - - 0.972 tumor protein p53 inducible protein 11b [Source:ZFIN;Acc:ZDB-GENE-030131-6328]
14. CR954145.1 CR954145.1 327 1.716 - - - - - - - 0.747 0.969
15. zgc:113184 ENSDARG00000098181 500 1.715 - 0.765 - - - - - - 0.950 zgc:113184 [Source:ZFIN;Acc:ZDB-GENE-050522-9]
16. ralgps2 ENSDARG00000026519 1610 1.714 - - - - - - - 0.814 0.900 Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
17. tmem161b ENSDARG00000055989 680 1.713 - - - - - - 0.775 0.938 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
18. MXD4 ENSDARG00000054031 1165 1.712 0.803 - - - - - - - 0.909 MAX dimerization protein 4 [Source:ZFIN;Acc:ZDB-GENE-050208-44]
19. arl6 ENSDARG00000032056, ENSDARG00000113281 238 1.705 - - - - - - 0.731 - 0.974 ADP-ribosylation factor-like 6 [Source:ZFIN;Acc:ZDB-GENE-041219-2]
20. klf15 ENSDARG00000091127 1037 1.702 - - - - - - - 0.804 0.898 Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
21. angptl6 ENSDARG00000020265 273 1.7 - - - - - - - 0.757 0.943 angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
22. nudt15 ENSDARG00000113961 381 1.696 - 0.755 - - - - - - 0.941 nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
23. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 1.69 - - - - - - - 0.806 0.884 sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
24. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 1.685 - - - - - - 0.712 - 0.973 tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
25. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.678 - - - - - - - 0.784 0.894 MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
26. zgc:153911 ENSDARG00000002509 110 1.672 0.787 0.885 - - - - - - - zgc:153911 [Source:ZFIN;Acc:ZDB-GENE-061013-174]
27. rpe65b ENSDARG00000094752, ENSDARG00000113621 463 1.668 - 0.752 - - - - - 0.916 - retinal pigment epithelium-specific protein 65b [Source:ZFIN;Acc:ZDB-GENE-050410-16]
28. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 1.665 - 0.724 - - - - - - 0.941 RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
29. rreb1a ENSDARG00000063701 915 1.662 - 0.756 - - - - - - 0.906 ras responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030219-137]
30. xrcc5_1 ENSDARG00000099298 1533 1.653 - 0.824 - - - - - - 0.829 X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
31. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.647 - - - - - - - 0.932 0.715 supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
32. kif3b ENSDARG00000101120 1158 1.637 - 0.729 - - - - - - 0.908 kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
33. kcnj13 ENSDARG00000043443 700 1.635 - - - - - - 0.777 0.858 - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
34. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 1.631 0.877 0.754 - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
35. mrps25 ENSDARG00000041306 3654 1.623 - - - - - - 0.733 - 0.890 mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
36. BX908793.1 BX908793.1 573 1.621 - - - - - - - 0.701 0.920
37. setd1a ENSDARG00000060030 874 1.609 - - - - - - 0.787 0.822 - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
38. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 1.603 - - - - - - 0.731 - 0.872 integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
39. ccl25b ENSDARG00000070873 454 1.601 - 0.774 - - - - 0.827 - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
40. gpsm2 ENSDARG00000017311, ENSDARG00000113810 1001 1.599 0.702 - - - - - - - 0.897 G protein signaling modulator 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1169]
41. REXO4 ENSDARG00000088619 655 1.594 - - - - - - 0.740 - 0.854 REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
42. wdr43 ENSDARG00000077264 1992 1.592 - - - - - - 0.704 - 0.888 WD repeat domain 43 [Source:ZFIN;Acc:ZDB-GENE-021231-3]
43. surf6 ENSDARG00000035427 1695 1.59 - - - - - - 0.713 0.877 - surfeit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1333]
44. rpf2 ENSDARG00000043960 2719 1.588 - - - - - - 0.749 0.839 - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
45. SLC41A2 SLC41A2 202 1.581 - - - - - - 0.774 0.807 -
46. vps37a ENSDARG00000017119, ENSDARG00000110505 772 1.577 - 0.872 - - - - 0.705 - - vacuolar protein sorting 37A [Source:ZFIN;Acc:ZDB-GENE-030131-8312]
47. TRIM14_7 TRIM14_7 381 1.575 - 0.763 - - - - 0.812 - -
48. nrp2a_1 ENSDARG00000096546 3358 1.572 - - - - - - 0.792 - 0.780 neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
49. pmela ENSDARG00000091298 5179 1.563 - - - - - - 0.792 0.771 - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
50. itpkca ENSDARG00000002994 710 1.549 - - - - - - 0.716 0.833 - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
51. pls3 ENSDARG00000037655 5175 1.547 - 0.768 - 0.779 - - - - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
52. CABZ01080098.1 ENSDARG00000110680 10942 1.541 - 0.715 - - - - - - 0.826
53. CABZ01031170.1 CABZ01031170.1 137 1.538 - - - - - 0.801 0.737 - -
54. slc6a13l 121 1.533 - 0.788 - - - 0.745 - - - solute carrier family 6 (neurotransmitter transporter, GABA), member 13 like, transcript variant X2
55. pdxdc1 ENSDARG00000101886 1958 1.503 0.720 - - - - - - - 0.783 pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
56. haao ENSDARG00000076487 143 1.502 - 0.723 - - - - 0.779 - - 3-hydroxyanthranilate 3,4-dioxygenase [Source:ZFIN;Acc:ZDB-GENE-041114-89]
57. FAM98C FAM98C 225 1.499 - 0.781 - - - - 0.718 - -
58. si:dkey-46m10.3 si:dkey-46m10.3 246 1.484 - 0.722 - - - - 0.762 - -
59. GFRAL ENSDARG00000089709 167 1.484 - 0.780 - - - - 0.704 - - GDNF family receptor alpha like [Source:ZFIN;Acc:ZDB-GENE-110607-2]
60. ERMP1_1 ERMP1_1 616 1.467 - 0.762 - - - - 0.705 - -
61. mta3 ENSDARG00000054903, ENSDARG00000113436 353 1.466 - 0.731 - - - - 0.735 - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
62. pcdh10a ENSDARG00000099729 2214 1.464 - - - - - - 0.756 0.708 - protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
63. slc25a14 ENSDARG00000026680, ENSDARG00000113197 2387 1.455 - - - 0.708 - - - - 0.747 solute carrier family 25 (mitochondrial carrier, brain), member 14 [Source:ZFIN;Acc:ZDB-GENE-040426-749]
64. sgk1 ENSDARG00000025522, ENSDARG00000115600 1650 1.444 - - - - - 0.737 0.707 - - serum/glucocorticoid regulated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2860]
65. BX571712.1 ENSDARG00000097833 764 1.424 0.714 0.710 - - - - - - -
66. TTF1_4 TTF1_4 504 0.986 - - - - - - - 0.986 -
67. eve1 ENSDARG00000056012 144 0.981 - - - - - - - - 0.981 even-skipped-like1 [Source:ZFIN;Acc:ZDB-GENE-980526-69]
68. si:ch73-167f18.3 si:ch73-167f18.3 78 0.98 - - - - - - - 0.980 -
69. ecd ENSDARG00000022944, ENSDARG00000114710 273 0.98 - - - - - - - - 0.980 ecdysoneless homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6304]
70. CT030712.1 ENSDARG00000044355 83 0.979 - - - - - - - - 0.979 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
71. GDPD4_1 GDPD4_1 190 0.979 - - - - - - - 0.979 -
72. myo18ab ENSDARG00000061862 124 0.979 - - - - - - - - 0.979 myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
73. pde6b ENSDARG00000011671 44 0.979 - - - - - - - 0.979 - phosphodiesterase 6B, cGMP-specific, rod, beta [Source:ZFIN;Acc:ZDB-GENE-090421-2]
74. pex5la ENSDARG00000022518, ENSDARG00000109971, ENSDARG00000110029, ENSDARG00000112628 28 0.979 - - - - - - - 0.979 - peroxisomal biogenesis factor 5-like a [Source:ZFIN;Acc:ZDB-GENE-070705-298]
75. PFKL_1 PFKL_1 298 0.979 - - - - - - - - 0.979
76. ankdd1b ENSDARG00000025866 51 0.979 - - - - - - - 0.979 - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
77. jam3a ENSDARG00000114589 630 0.979 - - - - - - - 0.979 - junctional adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-070424-177]
78. IKZF4 ENSDARG00000037068 36 0.979 - - - - - - - 0.979 - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
79. adcyap1a ENSDARG00000004015 67 0.979 - - - - - - - 0.979 - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
80. hoxa4a 37 0.979 - - - - - - - 0.979 - homeobox A4a, transcript variant X4
81. MAP7 MAP7 98 0.979 - - - - - - - 0.979 -
82. si:dkey-100h21.2 si:dkey-100h21.2 30 0.979 - - - - - - - 0.979 -
83. VDAC3 ENSDARG00000003695 34 0.978 - - - - - - - 0.978 - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
84. CABZ01063402.1 CABZ01063402.1 64 0.978 - - - - - - - - 0.978
85. kti12 ENSDARG00000054301, ENSDARG00000112513, ENSDARG00000114091 382 0.978 - - - - - - - - 0.978 KTI12 chromatin associated homolog [Source:ZFIN;Acc:ZDB-GENE-060825-174]
86. FAM83H FAM83H 190 0.978 - - - - - - - - 0.978
87. enpp6 ENSDARG00000040469 187 0.978 - - - - - - - - 0.978 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:ZFIN;Acc:ZDB-GENE-031205-1]
88. si:ch211-89o5.1 si:ch211-89o5.1 91 0.978 - - - - - - - - 0.978
89. si:dkey-246e3.4 ENSDARG00000086390 50 0.978 - - - - - - - - 0.978 si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
90. mir130b 180 0.978 - - - - - - - 0.978 - microRNA 130b
91. ERAP1_1 ERAP1_1 64 0.978 - - - - - - - - 0.978
92. zgc:153151 ENSDARG00000069563 126 0.977 - - - - - - - - 0.977 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
93. per1b ENSDARG00000012499 320 0.977 - - - - - - - - 0.977 period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
94. POLQ ENSDARG00000044622, ENSDARG00000110374 94 0.977 - - - - - - - 0.977 - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
95. gpr1 ENSDARG00000101366 733 0.977 - - - - - - - - 0.977 G protein-coupled receptor 1 [Source:ZFIN;Acc:ZDB-GENE-091204-457]
96. spef2 ENSDARG00000098330 59 0.977 - - - - - - - 0.977 - sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
97. casp2 ENSDARG00000062052 559 0.977 - - - - - - - - 0.977 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
98. si:dkey-17e6.2 si:dkey-17e6.2 72 0.976 - - - - - - - 0.976 -
99. CR388047.3 ENSDARG00000117023 89 0.976 - - - - - - - - 0.976
100. nfu1 ENSDARG00000068125 1743 0.976 - - - - - - - - 0.976 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]

There are 1362 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA