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Results for smarcc1a

Gene Name Gene ID Reads Annotation
smarcc1a ENSDARG00000017397 2957 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]










Genes with expression patterns similar to smarcc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smarcc1a ENSDARG00000017397 2957 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a [Source:ZFIN;Acc:ZDB-GENE-080514-3]
2. smc4 ENSDARG00000038882 4373 2.91 - - - 0.715 0.731 - 0.718 - 0.746 structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
3. lbr ENSDARG00000014013 4835 2.358 0.827 - - 0.822 0.709 - - - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
4. krcp ENSDARG00000040224 5961 2.261 - - - 0.708 - 0.741 - - 0.812 kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
5. gdi1 ENSDARG00000056122 4106 2.248 0.745 0.801 - - - - 0.702 - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
6. smarcd1 ENSDARG00000019004 6028 2.24 - - - 0.771 0.730 - - - 0.739 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
7. aurkb ENSDARG00000037640 4874 2.237 - - - 0.738 0.709 - - - 0.790 aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
8. cntn3a.1 ENSDARG00000062880 156 1.697 - - - - - 0.853 0.844 - - contactin 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081030-10]
9. fyna ENSDARG00000011370 1679 1.665 - - - 0.799 - - - - 0.866 FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
10. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.655 0.893 - - - - 0.762 - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
11. SMAD4 SMAD4 3233 1.654 - - - 0.771 - - - - 0.883
12. znf865 ENSDARG00000036698 15532 1.652 - - - 0.811 - - - - 0.841 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
13. arglu1b ENSDARG00000018319 1110 1.642 0.852 - - - - 0.790 - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
14. abi1b ENSDARG00000062991 1564 1.639 - - 0.730 - - - - - 0.909 abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
15. gnb4b ENSDARG00000115383 7457 1.631 0.857 - - - - - - - 0.774 guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
16. ubl7 ubl7 1435 1.629 0.898 0.731 - - - - - - -
17. ccne2 ENSDARG00000098529 4695 1.625 0.878 - - - - - 0.747 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
18. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.624 0.779 - - - - - 0.845 - - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
19. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1.622 0.808 0.814 - - - - - - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
20. CR848032.1 ENSDARG00000102710 338 1.619 - - - - - 0.884 0.735 - -
21. rbm4.2 ENSDARG00000055080 5241 1.618 - - - 0.762 - - - - 0.856 RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
22. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 1.611 - - - - - 0.787 0.824 - - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
23. paip2b ENSDARG00000008706 4255 1.6 0.799 - - - - - 0.801 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
24. CR387996.1 ENSDARG00000097774 3037 1.6 - - - - - 0.766 - - 0.834
25. lrrfip2 ENSDARG00000010400 2633 1.599 0.852 - - - - 0.747 - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
26. kazald3 ENSDARG00000053509 513 1.594 0.762 - - - - 0.832 - - - Kazal-type serine peptidase inhibitor domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-155]
27. timeless ENSDARG00000078497 1114 1.593 - - - - - 0.828 - - 0.765 timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
28. hmga1b ENSDARG00000070951 377 1.592 - - - - - - 0.820 0.772 - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
29. FP085405.1 FP085405.1 5189 1.586 - - - - - - 0.747 - 0.839
30. paf1 ENSDARG00000098432 1806 1.583 - - - - - 0.781 - - 0.802 PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
31. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.582 - - - 0.816 - - 0.766 - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
32. rerea ENSDARG00000077353 4162 1.581 0.851 - - - - 0.730 - - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
33. hat1 ENSDARG00000034916 5712 1.581 0.744 - - - - - - - 0.837 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
34. zc3h15 ENSDARG00000015889 3861 1.58 0.746 - - - - - 0.834 - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
35. C5H9orf78 C5H9orf78 1550 1.575 - - - - - 0.794 - - 0.781
36. bmp5 ENSDARG00000101701 517 1.571 0.858 - - - - 0.713 - - - bone morphogenetic protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1413]
37. cby1 ENSDARG00000077409, ENSDARG00000113018 772 1.571 0.817 - - - - - - - 0.754 chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
38. fbxw11a ENSDARG00000104806 1815 1.57 - - - - - 0.784 0.786 - - F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
39. runx1t1 ENSDARG00000003680 633 1.567 - - - 0.729 - - 0.838 - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
40. cdkn2aipnl ENSDARG00000053395 5107 1.566 - - - 0.706 - - - - 0.860 CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
41. llgl1 ENSDARG00000009693 4205 1.561 0.791 - - 0.770 - - - - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
42. tfap4 ENSDARG00000103923 2203 1.561 - - - 0.758 - - - - 0.803 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
43. ints3 ENSDARG00000016811 339 1.561 - - - 0.751 - - 0.810 - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
44. swt1 ENSDARG00000094010 472 1.557 0.825 - - - - - 0.732 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
45. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.555 0.838 - - - - 0.717 - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
46. fam118b ENSDARG00000078983 1822 1.548 - - - - 0.706 - - - 0.842 family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
47. bub1 ENSDARG00000077029 634 1.547 0.846 - - 0.701 - - - - - BUB1 mitotic checkpoint serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-081104-75]
48. tle2 5014 1.545 - - - 0.794 0.751 - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
49. gas2l3 ENSDARG00000045880 614 1.545 - - - - - 0.765 - - 0.780 growth arrest-specific 2 like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2560]
50. srsf11 ENSDARG00000098574 12801 1.542 - - - - - - 0.738 - 0.804 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
51. cmtm6 ENSDARG00000099631 641 1.541 0.818 - - - - 0.723 - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
52. si:ch211-120j21.1 si:ch211-120j21.1 638 1.541 0.748 - - - - 0.793 - - -
53. cpsf5 cpsf5 1841 1.54 0.814 - - - - - - 0.726 -
54. psd3l ENSDARG00000104820 1201 1.539 - - - - - - 0.707 - 0.832 pleckstrin and Sec7 domain containing 3, like [Source:ZFIN;Acc:ZDB-GENE-030131-8195]
55. fam222a ENSDARG00000090797 566 1.535 - - - - - 0.790 0.745 - - family with sequence similarity 222, member A [Source:ZFIN;Acc:ZDB-GENE-050309-42]
56. bub3 ENSDARG00000075883 1333 1.535 0.824 - - 0.711 - - - - - BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
57. CASKIN2_1 CASKIN2_1 2299 1.534 0.775 - - - - - - - 0.759
58. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 1.533 - 0.825 0.708 - - - - - - zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
59. sf1 ENSDARG00000008188 5142 1.531 - - - 0.819 - 0.712 - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
60. myef2 ENSDARG00000059398 6050 1.528 - - - - 0.747 0.781 - - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
61. Sep-12 Sep-12 1828 1.526 - - - - - 0.770 - - 0.756
62. C3H16orf72 C3H16orf72 2059 1.525 0.767 - - - - 0.758 - - -
63. pi4k2b ENSDARG00000013881 1337 1.525 0.805 - - - - 0.720 - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
64. trim3b ENSDARG00000005397 680 1.522 - - - - - 0.772 0.750 - - tripartite motif containing 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1132]
65. cux1a ENSDARG00000078459 3914 1.522 - - - - - - - 0.710 0.812 cut-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5868]
66. arfgef1 ENSDARG00000063474 1131 1.519 - - - - - 0.751 0.768 - - ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-030131-108]
67. leo1 ENSDARG00000055357 1644 1.519 0.778 - - - - - 0.741 - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
68. rnpep ENSDARG00000012506, ENSDARG00000110262 516 1.519 0.746 - - - - - 0.773 - - arginyl aminopeptidase (aminopeptidase B) [Source:ZFIN;Acc:ZDB-GENE-040718-241]
69. tox4 tox4 1671 1.518 - - - - - 0.786 0.732 - -
70. rangap1a ENSDARG00000041317 1456 1.517 - - - - - - 0.784 - 0.733 RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
71. trib3 ENSDARG00000016200 1231 1.512 0.730 - - - - 0.782 - - - tribbles pseudokinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2609]
72. lmbrd1 ENSDARG00000104223 924 1.506 - - - - - 0.792 - - 0.714 LMBR1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-36]
73. LDLRAD4 LDLRAD4 1237 1.502 - - - - - 0.793 0.709 - -
74. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.497 - - - - 0.747 0.750 - - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
75. sephs1 ENSDARG00000058292 3347 1.493 - - 0.764 - 0.729 - - - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
76. kdm6bb ENSDARG00000056929 4807 1.493 - - - - - - 0.791 0.702 - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
77. SEC16A 1707 1.489 - - - - - - 0.757 - 0.732 SEC16 homolog A, endoplasmic reticulum export factor, transcript variant X3
78. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.488 - 0.771 - - - - - - 0.717 discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
79. dus3l ENSDARG00000099528 1192 1.488 - 0.773 - - - - - - 0.715 dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
80. derl1 ENSDARG00000021905 4698 1.487 - - 0.748 - - 0.739 - - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
81. xrn2 ENSDARG00000101900 2875 1.487 - 0.717 - - - 0.770 - - - 5'-3' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2874]
82. usp1 ENSDARG00000056414 1816 1.485 - - - - 0.738 0.747 - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
83. rnf170 ENSDARG00000104069 838 1.485 0.780 - - - - - - - 0.705 ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
84. kif22 ENSDARG00000102624 3694 1.485 - - - 0.775 - - 0.710 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
85. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.481 - - - 0.736 - - - - 0.745 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
86. ing4 ENSDARG00000030716 5908 1.478 0.774 - 0.704 - - - - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
87. fam102aa ENSDARG00000102566 903 1.478 - - 0.731 - - 0.747 - - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
88. tcf12 ENSDARG00000004714 7606 1.477 - 0.772 - - - - - - 0.705 transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040516-11]
89. setdb1b ENSDARG00000099021 2937 1.474 - - - 0.742 0.732 - - - - SET domain, bifurcated 1b [Source:ZFIN;Acc:ZDB-GENE-061013-224]
90. suv420h2 2186 1.47 - 0.742 0.728 - - - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
91. MIS12 ENSDARG00000026454 649 1.468 - - - - - - 0.718 - 0.750 MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-040426-1372]
92. fscn1a ENSDARG00000059680 3999 1.466 - - 0.729 - - - 0.737 - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
93. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.464 - - 0.755 - - - - - 0.709 tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
94. haus4 ENSDARG00000016594 986 1.461 - - - 0.760 - - - 0.701 - HAUS augmin-like complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040718-122]
95. ncapd2 ENSDARG00000005058 2819 1.46 - - - 0.730 0.730 - - - - non-SMC condensin I complex, subunit D2 [Source:ZFIN;Acc:ZDB-GENE-050506-59]
96. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 1.458 - - 0.730 - - - - - 0.728 integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
97. pola1 ENSDARG00000045308 1194 1.458 - 0.729 - - 0.729 - - - - polymerase (DNA directed), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030114-9]
98. PEG3_5 PEG3_5 1624 1.453 - - 0.728 - - 0.725 - - -
99. ing3 ENSDARG00000034326 1326 1.448 - 0.705 - - - 0.743 - - - inhibitor of growth family, member 3 [Source:ZFIN;Acc:ZDB-GENE-040109-3]
100. IM:7163548 IM:7163548 6540 1.446 - - - 0.740 - - - - 0.706

There are 1391 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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