Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smarcb1b

Gene Name Gene ID Reads Annotation
smarcb1b ENSDARG00000011594 2413 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]










Genes with expression patterns similar to smarcb1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smarcb1b ENSDARG00000011594 2413 8 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
2. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.407 0.731 - - 0.829 - - - 0.847 - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
3. tmpoa ENSDARG00000007315 3638 2.337 - - - 0.783 - 0.762 0.792 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
4. sox21b ENSDARG00000008540 1460 2.317 0.768 - - - - - - 0.789 0.760 SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
5. ddx39ab ENSDARG00000015111 11619 2.286 - - - 0.711 - 0.725 - - 0.850 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
6. sin3b ENSDARG00000062472 2025 2.273 - - 0.765 - - 0.705 - 0.803 - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
7. nbeaa ENSDARG00000070080 862 2.273 0.744 0.817 - - - - - 0.712 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
8. zgc:174906 ENSDARG00000075314 2187 2.254 - - - 0.757 - 0.706 - - 0.791 zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
9. whsc1l1 8544 2.25 - - - - - 0.713 0.756 - 0.781 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
10. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.243 - - - 0.702 - 0.793 0.748 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
11. nell2b ENSDARG00000062797 854 2.222 0.814 - - - - - - 0.706 0.702 neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
12. scrt1a ENSDARG00000100821 2687 2.216 0.705 0.734 - - - - - 0.777 - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
13. lfng ENSDARG00000037879 11783 2.187 0.718 0.731 - 0.738 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
14. asf1bb ENSDARG00000043713 2340 2.17 0.713 - 0.749 0.708 - - - - - anti-silencing function 1Bb histone chaperone [Source:ZFIN;Acc:ZDB-GENE-040426-2594]
15. CCNA2 ENSDARG00000011094 3996 2.165 - - 0.740 - - 0.711 - - 0.714 cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
16. ezh2 ENSDARG00000010571 3273 2.137 - - 0.714 0.716 - 0.707 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
17. ppm1g ENSDARG00000075559 6516 1.683 - - - 0.808 - - - - 0.875 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
18. carm1 ENSDARG00000018698 5599 1.664 - - - 0.836 - 0.828 - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
19. CABZ01111990.1 CABZ01111990.1 4374 1.634 0.800 - - - - - - 0.834 -
20. u2af2a ENSDARG00000012505 2920 1.626 - - - - - - - 0.748 0.878 U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
21. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.62 - - - 0.745 - - - 0.875 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
22. ctnnb1 ENSDARG00000014571 12004 1.596 - 0.793 - - - - - 0.803 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
23. srrm1 ENSDARG00000001244 4972 1.594 - - - - - - 0.775 - 0.819 serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
24. zgc:194469 ENSDARG00000104367 93 1.593 0.816 0.777 - - - - - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
25. znf865 ENSDARG00000036698 15532 1.592 - - - 0.772 - - - - 0.820 zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
26. h2afvb ENSDARG00000116491 35692 1.583 - 0.826 - - - - - 0.757 - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
27. C7H4orf48 C7H4orf48 1455 1.582 - 0.798 - - - - - 0.784 -
28. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.579 - - - - - - - 0.779 0.800 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
29. b9d1 ENSDARG00000011727 580 1.574 - - - - - - 0.782 0.792 - B9 protein domain 1 [Source:ZFIN;Acc:ZDB-GENE-050522-467]
30. srgap1 srgap1 2320 1.574 - - - - - 0.822 0.752 - -
31. fam60al 2846 1.573 - - - 0.747 - - - - 0.826 family with sequence similarity 60, member A, like
32. cdkn2aipnl ENSDARG00000053395 5107 1.571 - - - 0.702 - - - - 0.869 CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
33. KIF1A KIF1A 1686 1.567 - 0.790 - - - - - 0.777 -
34. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.565 0.728 - - - - - - - 0.837 N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
35. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 1.565 - 0.787 - - - - - 0.778 - cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
36. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 1.554 0.812 0.742 - - - - - - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
37. fyna ENSDARG00000011370 1679 1.552 - - - 0.705 - - - - 0.847 FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
38. parp1 ENSDARG00000019529 6787 1.549 0.840 - 0.709 - - - - - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
39. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.547 0.805 0.742 - - - - - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
40. rbb4 rbb4 15541 1.547 - - 0.741 - - - - - 0.806
41. KIF4A KIF4A 3322 1.547 - - - - - 0.730 - - 0.817
42. srsf4 ENSDARG00000105293 9657 1.544 - 0.767 - - - 0.777 - - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
43. si:dkeyp-117h8.4 ENSDARG00000043004 457 1.539 0.761 0.778 - - - - - - - si:dkeyp-117h8.4 [Source:ZFIN;Acc:ZDB-GENE-030804-4]
44. wsb1 ENSDARG00000021343 3828 1.538 - 0.822 - - - - - 0.716 - WD repeat and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1946]
45. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.538 - - - - - - 0.712 - 0.826 small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
46. her4.1 ENSDARG00000056732 1264 1.536 0.701 - - - - - - 0.835 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
47. sox2 ENSDARG00000070913 2763 1.535 0.753 - - 0.782 - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
48. smarce1 ENSDARG00000016871 9628 1.534 - - - 0.821 - - - 0.713 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
49. clvs2 ENSDARG00000053122 1390 1.531 - 0.776 - - - - - 0.755 - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
50. adcyap1b ENSDARG00000027740 1539 1.531 - 0.774 - - - - - 0.757 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
51. drap1 ENSDARG00000041203 6749 1.529 - - 0.744 - - - - 0.785 - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
52. tfap4 ENSDARG00000103923 2203 1.524 - - - 0.773 - - - - 0.751 transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
53. ilf3b ENSDARG00000105177 9473 1.518 - - - 0.753 - - - 0.765 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
54. pgam5 ENSDARG00000035608 4044 1.517 - - - - - - 0.715 - 0.802 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
55. ankhb ENSDARG00000014969 328 1.516 0.705 0.811 - - - - - - - ANKH inorganic pyrophosphate transport regulator b [Source:ZFIN;Acc:ZDB-GENE-030131-2458]
56. ddx5 ENSDARG00000038068 35302 1.516 - - - 0.799 - 0.717 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
57. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.512 - - - 0.758 - - 0.754 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
58. cdc23 ENSDARG00000044484 767 1.51 0.805 0.705 - - - - - - - CDC23 (cell division cycle 23, yeast, homolog) [Source:ZFIN;Acc:ZDB-GENE-040426-866]
59. ccdc28b ENSDARG00000011222 528 1.507 0.787 - - - - - - 0.720 - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
60. her13 ENSDARG00000007097 2000 1.506 - - - 0.726 - - - 0.780 - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
61. fabp7a ENSDARG00000007697 5211 1.505 - - - 0.792 - 0.713 - - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
62. hat1 ENSDARG00000034916 5712 1.504 - - - - - - 0.705 - 0.799 histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
63. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.501 0.781 - - 0.720 - - - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
64. cry2a cry2a 2728 1.5 - - - - - - - 0.730 0.770
65. nup188 ENSDARG00000030022 2398 1.5 - 0.765 - - - - 0.735 - - nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
66. ssbp4 ENSDARG00000056483 10196 1.497 - - - - - 0.701 - 0.796 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
67. zgc:66475 ENSDARG00000099519 1348 1.496 - 0.715 - - - - 0.781 - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
68. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 1.492 - - - - - 0.736 - 0.756 - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
69. marcksa ENSDARG00000004049 2518 1.491 - - - - - 0.727 - 0.764 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
70. adnpa ENSDARG00000062002, ENSDARG00000115617 2009 1.49 - - - 0.721 - - - 0.769 - activity-dependent neuroprotector homeobox a [Source:ZFIN;Acc:ZDB-GENE-061215-112]
71. epha4b ENSDARG00000011600 3110 1.488 - 0.772 - 0.716 - - - - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
72. ylpm1 ENSDARG00000043680 7676 1.486 - - - 0.779 - 0.707 - - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
73. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.485 - - - - - 0.728 0.757 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
74. rnf20 ENSDARG00000016664 3641 1.481 - - - - - - - 0.714 0.767 ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]
75. patl1 ENSDARG00000017423 2744 1.477 - - - - - - 0.743 0.734 - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
76. rrm1 ENSDARG00000014017 7296 1.477 - 0.709 - - - - 0.768 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
77. nova2 ENSDARG00000017673 7685 1.476 0.764 - - 0.712 - - - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
78. gap43 ENSDARG00000099744 4114 1.475 0.719 - - - - - - 0.756 - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
79. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.473 - 0.758 - - - 0.715 - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
80. TAF15 ENSDARG00000070019 5102 1.47 - - - - - 0.753 - 0.717 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
81. mab21l1 ENSDARG00000102047 4665 1.47 - - - 0.710 - - - 0.760 - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
82. kidins220b ENSDARG00000017338 1937 1.468 - 0.752 - - - 0.716 - - - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
83. HNRNPAB HNRNPAB 22267 1.466 - - - - - - 0.725 - 0.741
84. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.464 - - - - - - 0.762 - 0.702 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
85. her2 ENSDARG00000038205 3219 1.463 0.726 - - 0.737 - - - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
86. nrarpb ENSDARG00000018958 6225 1.46 0.757 - - 0.703 - - - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
87. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.46 - - - - - - 0.713 0.747 - zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
88. ppm1ab ENSDARG00000043250 772 1.458 0.715 0.743 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Ab [Source:ZFIN;Acc:ZDB-GENE-991102-14]
89. tcea1 ENSDARG00000003531 2912 1.453 - - 0.716 0.737 - - - - - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
90. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 1.448 - - - 0.720 - 0.728 - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
91. h2afva ENSDARG00000068820 16427 1.447 - - - - - 0.737 0.710 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
92. api5 ENSDARG00000033597 6655 1.445 - - - 0.703 - 0.742 - - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
93. hnrpl 6412 1.441 - - - 0.711 - 0.730 - - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
94. aebp2 ENSDARG00000006038 462 1.441 - - - 0.701 - - - 0.740 - AE binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2885]
95. zgc:92664 ENSDARG00000015161 1651 1.438 0.725 - 0.713 - - - - - - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
96. trib3 ENSDARG00000016200 1231 1.432 - 0.718 - - - - - 0.714 - tribbles pseudokinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2609]
97. marcksl1b ENSDARG00000035715 37390 1.432 0.707 - - - - - - - 0.725 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
98. adam11 ENSDARG00000079204 298 1.429 0.716 0.713 - - - - - - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
99. daxx ENSDARG00000000729 734 1.428 - - - 0.728 - - 0.700 - - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
100. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.428 - - - 0.707 - 0.721 - - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]

There are 1102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA