Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smarcal1

Gene Name Gene ID Reads Annotation
smarcal1 ENSDARG00000102265 1921 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]










Genes with expression patterns similar to smarcal1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smarcal1 ENSDARG00000102265 1921 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
2. sf3a1 ENSDARG00000041887 6702 1.965 - - 0.973 - 0.992 - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
3. ube2e1 ENSDARG00000116649 10656 1.856 - - 0.995 - 0.861 - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
4. rhbdd2 ENSDARG00000092463 937 1.832 - - - 0.834 0.998 - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
5. zgc:113333 ENSDARG00000038242 797 1.785 0.788 - - - 0.997 - - - - zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
6. ENSDARG00000088164 ENSDARG00000088164 59 1.761 0.838 - - - - 0.923 - - -
7. fancc ENSDARG00000055232, ENSDARG00000116499 50 1.718 0.850 0.868 - - - - - - - FA complementation group C [Source:ZFIN;Acc:ZDB-GENE-060510-2]
8. si:ch73-362m14.2 ENSDARG00000090164 47 1.714 0.811 0.903 - - - - - - - si:ch73-362m14.2 [Source:ZFIN;Acc:ZDB-GENE-120215-235]
9. CABZ01068473.1 CABZ01068473.1 67 1.662 - 0.878 - - - - 0.784 - -
10. AP3B2 1874 1.624 - - - 0.724 0.900 - - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
11. si:ch211-239j9.1 ENSDARG00000096319 27 1.547 0.799 - - - - - 0.748 - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
12. klhl22 ENSDARG00000088807 324 1.541 - 0.745 - 0.796 - - - - - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
13. si:ch211-214j8.12 ENSDARG00000092556 65 1.535 - 0.815 - - - - 0.720 - - si:ch211-214j8.12 [Source:ZFIN;Acc:ZDB-GENE-060526-102]
14. slc27a6 ENSDARG00000046053 57 1.528 0.820 - - - - - 0.708 - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
15. ercc6 ENSDARG00000075612 1175 1.528 0.732 - - 0.796 - - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
16. SRR SRR 544 1.501 0.768 - - - - - 0.733 - -
17. AL935128.1 AL935128.1 238 1.472 - - - 0.714 - - 0.758 - -
18. tfdp1b ENSDARG00000016304 3071 1 - - 1.000 - - - - - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
19. timmdc1 ENSDARG00000053466 2179 1 - - 1.000 - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
20. cops2 ENSDARG00000004785 4911 1 - - 1.000 - - - - - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
21. NSMCE2 ENSDARG00000076379 2133 1 - - 1.000 - - - - - - NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
22. toporsb ENSDARG00000105028 1898 1 - - 1.000 - - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
23. si:dkey-177p2.6 ENSDARG00000042322 2783 1 - - 1.000 - - - - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
24. HPCAL1 ENSDARG00000022763 2885 1 - - 1.000 - - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
25. blzf1 ENSDARG00000011299 2568 1 - - 1.000 - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
26. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 1 - - 1.000 - - - - - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
27. mpz ENSDARG00000038609 1740 1 - - 1.000 - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
28. CABZ01029822.1 ENSDARG00000086931 1654 1 - - 1.000 - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
29. ik ENSDARG00000004161 3132 1 - - 1.000 - - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
30. lamtor2 ENSDARG00000039872 3250 1 - - 1.000 - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
31. eif2ak3 ENSDARG00000062139 3276 1 - - 1.000 - - - - - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
32. ash2l ENSDARG00000060392 4916 0.999 - - 0.999 - - - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
33. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.999 - - - - 0.999 - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
34. commd3 ENSDARG00000045402 1601 0.999 - - - - 0.999 - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
35. bdh1 ENSDARG00000059388 3390 0.999 - - 0.999 - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
36. pdia3 ENSDARG00000102640 7239 0.999 - - 0.999 - - - - - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
37. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.999 - - 0.999 - - - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
38. glrx ENSDARG00000028106 16225 0.999 - - 0.999 - - - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
39. KDM5A ENSDARG00000104567 450 0.999 - - - - 0.999 - - - - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
40. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.999 - - - - 0.999 - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
41. commd4 ENSDARG00000061946 3281 0.999 - - 0.999 - - - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
42. zgc:162816 ENSDARG00000070416 974 0.999 - - - - 0.999 - - - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
43. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.999 - - - - 0.999 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
44. mrpl12 ENSDARG00000038768 5539 0.999 - - 0.999 - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
45. rnf11a ENSDARG00000010442 592 0.999 - - - - 0.999 - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
46. shisa3 ENSDARG00000075467 485 0.999 - - - - 0.999 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
47. pou4f1 ENSDARG00000005559 821 0.998 - - - - 0.998 - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
48. kazald2 ENSDARG00000078518 3062 0.998 - - 0.998 - - - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
49. zgc:162967 zgc:162967 2132 0.998 - - - - 0.998 - - - -
50. emid1 ENSDARG00000076119 862 0.998 - - - - 0.998 - - - - EMI domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-40]
51. foxi3a ENSDARG00000055926 749 0.998 - - - - 0.998 - - - - forkhead box I3a [Source:ZFIN;Acc:ZDB-GENE-031126-3]
52. ccdc19 ccdc19 495 0.998 - - - - 0.998 - - - -
53. gli2b ENSDARG00000020884 1468 0.998 - - - - 0.998 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
54. mutyh 512 0.998 - - - - 0.998 - - - - mutY DNA glycosylase
55. specc1la ENSDARG00000006719, ENSDARG00000115728 1079 0.998 - - - - 0.998 - - - - sperm antigen with calponin homology and coiled-coil domains 1-like a [Source:ZFIN;Acc:ZDB-GENE-060810-139]
56. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.998 - - - - 0.998 - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
57. reep3l reep3l 608 0.998 - - - - 0.998 - - - -
58. st3gal4 ENSDARG00000041006 636 0.998 - - - - 0.998 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
59. mef2d ENSDARG00000040237 6144 0.998 - - 0.998 - - - - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
60. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.998 - - - - 0.998 - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
61. ABTB2 ABTB2 584 0.998 - - - - 0.998 - - - -
62. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 0.998 - - - - 0.998 - - - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
63. NDST1 NDST1 1584 0.998 - - - - 0.998 - - - -
64. dnajb12a ENSDARG00000039363 1072 0.998 - - - - 0.998 - - - - DnaJ (Hsp40) homolog, subfamily B, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2725]
65. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 0.998 - - 0.998 - - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
66. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 0.998 - - - - 0.998 - - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
67. zfyve21 ENSDARG00000027887 1687 0.998 - - - - 0.998 - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
68. marveld1 ENSDARG00000011724 1025 0.997 - - - - 0.997 - - - - MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
69. CR954963.1 ENSDARG00000097153 1135 0.997 - - - - 0.997 - - - -
70. kctd9 kctd9 973 0.997 - - - - 0.997 - - - -
71. nkain1 ENSDARG00000006859 1961 0.997 - - - - 0.997 - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
72. fbn2b ENSDARG00000098237 10835 0.997 - - 0.997 - - - - - - fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
73. AMPD2 AMPD2 1723 0.997 - - - - 0.997 - - - -
74. ypel3 ENSDARG00000055510 1344 0.997 - - - - 0.997 - - - - yippee-like 3 [Source:ZFIN;Acc:ZDB-GENE-030516-4]
75. SI:DKEY-209E8.1 SI:DKEY-209E8.1 1143 0.997 - - - - 0.997 - - - -
76. si:dkey-20i20.2 ENSDARG00000071719 659 0.997 - - - - 0.997 - - - - si:dkey-20i20.2 [Source:ZFIN;Acc:ZDB-GENE-060503-528]
77. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 0.997 - - - - 0.997 - - - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
78. tmem223 ENSDARG00000069494 1528 0.997 - - - - 0.997 - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
79. rqcd1 2301 0.996 - - - - 0.996 - - - - RCD1 required for cell differentiation1 homolog (S. pombe)
80. aurkb ENSDARG00000037640 4874 0.996 - - 0.996 - - - - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
81. znf609 znf609 1049 0.996 - - - - 0.996 - - - -
82. dlx3b ENSDARG00000014626 3647 0.996 - - 0.996 - - - - - - distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
83. srsf3b ENSDARG00000059360 14888 0.996 - - 0.996 - - - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
84. arhgap1 ENSDARG00000024324 6904 0.996 - - 0.996 - - - - - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
85. appb ENSDARG00000055543, ENSDARG00000109552 4461 0.996 - - - - 0.996 - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
86. KLHL13 ENSDARG00000086463, ENSDARG00000103786, ENSDARG00000115063 914 0.996 - - - - 0.996 - - - - kelch-like family member 13 [Source:ZFIN;Acc:ZDB-GENE-030131-2671]
87. azi1_1 azi1_1 1375 0.996 - - - - 0.996 - - - -
88. rasl11a ENSDARG00000046013 1627 0.995 - - - - 0.995 - - - - RAS-like, family 11, member A [Source:ZFIN;Acc:ZDB-GENE-050417-384]
89. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 0.995 - - 0.995 - - - - - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
90. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 0.995 - - - - 0.995 - - - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
91. prox1a ENSDARG00000055158 1411 0.995 - - - - 0.995 - - - - prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]
92. nfu1 ENSDARG00000068125 1743 0.995 - - - - 0.995 - - - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
93. smo ENSDARG00000002952 6411 0.995 - - 0.995 - - - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
94. tsc2 ENSDARG00000103125 1403 0.995 - - - - 0.995 - - - - TSC complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2702]
95. camk2a ENSDARG00000053617 950 0.995 - - - - 0.995 - - - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
96. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 0.994 - - - - 0.994 - - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
97. noc4l ENSDARG00000045565 1337 0.994 - - - - 0.994 - - - - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
98. si:ch211-79l20.4 1305 0.994 - - - - 0.994 - - - - si:ch211-79l20.4, transcript variant X3
99. unc119.1 ENSDARG00000009629 1193 0.994 - - - - 0.994 - - - - unc-119 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030219-130]
100. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.994 - - - - 0.994 - - - - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]

There are 880 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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