Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smarca4

Gene Name Gene ID Reads Annotation
smarca4 smarca4 9726










Genes with expression patterns similar to smarca4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smarca4 smarca4 9726 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. whsc1l1 8544 3.955 - 0.864 - 0.774 0.709 0.834 0.774 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
3. si:dkey-67c22.2 ENSDARG00000055389 6410 3.807 0.720 - - 0.717 0.706 - 0.724 - 0.940 si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
4. ddx39ab ENSDARG00000015111 11619 3.098 0.787 - 0.776 - - 0.749 0.786 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
5. TAF15 ENSDARG00000070019 5102 3.079 0.814 - - - 0.759 0.778 0.728 - - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
6. uba1 ENSDARG00000037559 11579 3.039 0.744 - - 0.732 - 0.764 0.799 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
7. smarca5 ENSDARG00000052348 15433 2.984 - - 0.738 - - 0.752 0.753 0.741 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
8. hnrnpub ENSDARG00000004735 16496 2.923 0.723 - - 0.703 - - 0.782 0.715 - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
9. nipblb ENSDARG00000061052 6109 2.576 - - - - - 0.859 0.776 - 0.941 nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
10. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.486 - - - - - 0.756 0.796 - 0.934 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
11. atp2b4 5891 2.448 - 0.794 - - - 0.797 0.857 - - ATPase, Ca++ transporting, plasma membrane 4
12. smarce1 ENSDARG00000016871 9628 2.442 - 0.866 - 0.751 - - 0.825 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
13. ssbp4 ENSDARG00000056483 10196 2.438 - - - 0.710 - 0.910 0.818 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
14. HNRNPA2B1 HNRNPA2B1 14997 2.425 - 0.844 - 0.736 - - 0.845 - -
15. acin1a ENSDARG00000054290 14023 2.42 - 0.845 - 0.830 - - 0.745 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
16. meaf6 ENSDARG00000101216 6865 2.418 0.729 - - - 0.748 - - - 0.941 MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
17. TNRC6C_1 TNRC6C_1 6574 2.408 - - 0.795 0.800 - 0.813 - - -
18. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.392 - - - 0.812 - 0.844 0.736 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
19. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 2.365 - - - - 0.797 0.863 0.705 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
20. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.342 - 0.875 - 0.758 0.709 - - - - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
21. rapgef2 ENSDARG00000005482 2586 2.31 - 0.867 0.714 - - - 0.729 - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
22. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 2.307 0.768 - - 0.713 - - - - 0.826 proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
23. lypla2 ENSDARG00000053656 8971 2.293 - - 0.825 - 0.712 - 0.756 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
24. srsf6b ENSDARG00000016783 9926 2.28 - 0.843 - - 0.718 - 0.719 - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
25. srsf4 ENSDARG00000105293 9657 2.269 - - - - - 0.774 - 0.720 0.775 serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
26. arnt2 ENSDARG00000103697 5731 2.209 - - - - 0.726 0.747 0.736 - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
27. luc7l ENSDARG00000055903 3357 2.18 - - 0.749 - - 0.721 0.710 - - LUC7-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-111]
28. snapin ENSDARG00000062382 1531 1.751 - - - - - 0.815 - - 0.936 SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]
29. kif22 ENSDARG00000102624 3694 1.742 - - - - - 0.838 0.904 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
30. ylpm1 ENSDARG00000043680 7676 1.738 - - - 0.756 - - - - 0.982 YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
31. cdc25 cdc25 3913 1.732 - - - - - - 0.793 - 0.939
32. adnp2b ENSDARG00000028431 4683 1.713 - - - - - - 0.791 - 0.922 ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
33. rufy3 ENSDARG00000029692 3031 1.689 - - - - - - 0.750 - 0.939 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
34. rnps1 ENSDARG00000116743 9994 1.682 - - - - - 0.824 0.858 - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
35. tmem182 tmem182 12589 1.677 - 0.784 - - - - - - 0.893
36. h2afva ENSDARG00000068820 16427 1.676 - - - - - 0.891 0.785 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
37. actr1 ENSDARG00000011611 3879 1.671 - - - - - 0.866 0.805 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
38. setbp1 ENSDARG00000093799 4499 1.669 0.799 0.870 - - - - - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
39. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 1.661 - - - - - 0.799 0.862 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
40. NEDD4 NEDD4 2040 1.66 - - - - - 0.726 - - 0.934
41. rbx1 ENSDARG00000038030 14611 1.657 - 0.915 - - - 0.742 - - - ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
42. tmpoa ENSDARG00000007315 3638 1.643 - 0.872 - - - - 0.771 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
43. zgc:77086 ENSDARG00000014015 4908 1.641 - - - - - 0.722 - - 0.919 zgc:77086 [Source:ZFIN;Acc:ZDB-GENE-040426-2238]
44. top1l ENSDARG00000070545 40529 1.636 - - - 0.791 - - 0.845 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
45. srgap1 srgap1 2320 1.634 - - - - - 0.774 0.860 - -
46. ccnt1 ENSDARG00000017525 1888 1.63 - - - - - 0.734 0.896 - - cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
47. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 1.629 - 0.704 - - - - - - 0.925 fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
48. tes ENSDARG00000051857 2020 1.629 - 0.871 - - - - 0.758 - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
49. u2af2b ENSDARG00000011740 6946 1.629 - - - - - 0.823 0.806 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
50. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.621 - - - 0.806 - 0.815 - - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
51. chd7 ENSDARG00000075211 12085 1.618 - - - 0.801 - 0.817 - - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
52. kifc1 ENSDARG00000001558 6658 1.617 - - - - - 0.803 0.814 - - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
53. cx43.4 ENSDARG00000007099 16369 1.604 - - 0.796 - - 0.808 - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
54. ddx5 ENSDARG00000038068 35302 1.604 - - - 0.864 - 0.740 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
55. ahsa1l ahsa1l 2366 1.601 - 0.867 - - - - 0.734 - -
56. zgc:111974 zgc:111974 1386 1.598 - 0.863 - - - 0.735 - - -
57. pou2f1b ENSDARG00000007996 2172 1.596 - - - 0.712 - 0.884 - - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
58. hnrnpr ENSDARG00000014569 3423 1.595 - - 0.819 - - 0.776 - - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
59. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.594 - - - 0.759 - - 0.835 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
60. hnrpl 6412 1.593 - - - - - 0.829 0.764 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
61. pbx4 ENSDARG00000052150 35676 1.586 0.714 - - - - - 0.872 - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
62. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.582 - - 0.817 - - - 0.765 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
63. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 1.58 - 0.872 - - - - 0.708 - - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
64. ilf3b ENSDARG00000105177 9473 1.576 - - - 0.841 - - 0.735 - - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
65. eif4h ENSDARG00000042252 6742 1.573 0.760 - 0.813 - - - - - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
66. wu:fb54a03 wu:fb54a03 1722 1.573 - 0.872 - - - - 0.701 - -
67. etf1 etf1 12861 1.572 0.782 - 0.790 - - - - - -
68. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.572 - - - 0.788 - 0.784 - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
69. rtf1 ENSDARG00000008947 6596 1.572 - - 0.814 - - 0.758 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
70. znf865 ENSDARG00000036698 15532 1.566 - - - 0.814 - 0.752 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
71. rbm25 rbm25 3629 1.565 - - 0.800 - - 0.765 - - -
72. SERBP1 SERBP1 9276 1.564 - - 0.851 - - - 0.713 - -
73. ANKRD11 ENSDARG00000051886 10024 1.562 - - - - - 0.808 0.754 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
74. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.56 - - 0.789 - - - 0.771 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
75. hnrnpk ENSDARG00000018914 8841 1.558 - - 0.807 - - - 0.751 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
76. srrm1 ENSDARG00000001244 4972 1.557 - - - - - 0.838 0.719 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
77. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.556 - - - 0.808 - - 0.748 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
78. ppp2r2d ENSDARG00000102009 5710 1.556 - - 0.835 - - 0.721 - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
79. eif3ba ENSDARG00000059654 22960 1.555 - - 0.795 - - 0.760 - - - eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748]
80. cand1 ENSDARG00000017841 8164 1.554 0.740 - 0.814 - - - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
81. hoxd9a ENSDARG00000059274 3414 1.553 - - - - - 0.801 0.752 - - homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
82. ptprsa ENSDARG00000059738, ENSDARG00000110940 7232 1.553 - - 0.788 - - 0.765 - - - protein tyrosine phosphatase, receptor type, s, a [Source:ZFIN;Acc:ZDB-GENE-020107-3]
83. zgc:123105 ENSDARG00000003127 3061 1.551 - - - - - 0.823 0.728 - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
84. sdc4 ENSDARG00000059906 10105 1.547 - - 0.819 - - - 0.728 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
85. gdi1 ENSDARG00000056122 4106 1.546 - - - - - 0.821 0.725 - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
86. snrpb ENSDARG00000011125 11729 1.545 - - 0.804 - - - 0.741 - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
87. dut ENSDARG00000106529 3120 1.543 - - 0.764 - - - 0.779 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
88. si:ch73-46j18.5 ENSDARG00000092467 6002 1.542 0.718 - - - - - 0.824 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
89. alyref ENSDARG00000077732 25934 1.541 0.776 - - - - 0.765 - - - Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
90. LEPROTL1 ENSDARG00000104871 3019 1.539 - - - - - 0.753 0.786 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
91. ptenb ENSDARG00000056623 5783 1.538 - - - - - 0.730 0.808 - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
92. bri3bp ENSDARG00000010108 6295 1.537 - - - - - 0.733 0.804 - - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
93. sin3b ENSDARG00000062472 2025 1.537 - - - - - 0.759 0.778 - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
94. rrm1 ENSDARG00000014017 7296 1.536 - - - 0.777 - - 0.759 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
95. sf3b2 ENSDARG00000018049 4675 1.531 - 0.826 - - - - 0.705 - - splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
96. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.529 - - - - - 0.813 0.716 - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
97. lmnb1 ENSDARG00000044299 9817 1.529 - - 0.722 - - - 0.807 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
98. tdh ENSDARG00000002745 5344 1.528 - - - - - 0.746 0.782 - - L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]
99. epb41a ENSDARG00000099283 860 1.528 - - - 0.763 - 0.765 - - - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
100. u2surp ENSDARG00000061490 2814 1.526 - - - 0.715 - 0.811 - - - U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]

There are 1016 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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