Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smarca2

Gene Name Gene ID Reads Annotation
smarca2 ENSDARG00000008904, ENSDARG00000115738 644 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]










Genes with expression patterns similar to smarca2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smarca2 ENSDARG00000008904, ENSDARG00000115738 644 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5964]
2. nupr1 6040 2.226 - - - 0.729 - 0.766 0.731 - - nuclear protein 1
3. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1.821 - - - 0.867 - - - 0.954 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
4. mecr ENSDARG00000032326 314 1.784 - - - 0.836 - - - 0.948 - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
5. skilb ENSDARG00000022904 300 1.772 - - - 0.880 - - - 0.892 - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
6. rybpb ENSDARG00000053459 1464 1.766 - - - 0.863 - - - 0.903 - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
7. ZNF518B 475 1.759 - 0.843 - - - - - 0.916 - zinc finger protein 518B
8. efhd1 ENSDARG00000043446 703 1.71 - - - 0.765 - - - 0.945 - EF-hand domain family, member D1 [Source:ZFIN;Acc:ZDB-GENE-030131-7461]
9. phactr4a ENSDARG00000015552 1315 1.704 - - - 0.789 - - - 0.915 - phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
10. thbs3b ENSDARG00000012060 922 1.681 - 0.848 - - - - - 0.833 - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
11. uncx4.1 ENSDARG00000037760 472 1.658 - - - - - - 0.745 0.913 - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
12. ITFG3 ITFG3 1803 1.63 - - - 0.828 - - 0.802 - -
13. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.625 - 0.847 - 0.778 - - - - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
14. mms19 ENSDARG00000079067 65 1.623 - - - 0.843 0.780 - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
15. AL954372.1 ENSDARG00000112499 589 1.621 - 0.767 - - - - - 0.854 -
16. COQ7 ENSDARG00000062594 989 1.617 - - - - - - 0.726 0.891 - coenzyme Q7 homolog, ubiquinone (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-262]
17. OLFML2A ENSDARG00000005648 1658 1.605 - 0.705 - - - - - 0.900 - olfactomedin-like 2A [Source:ZFIN;Acc:ZDB-GENE-081105-107]
18. elp4 ENSDARG00000008852 253 1.601 - - - 0.773 - - - - 0.828 elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
19. rab6bb ENSDARG00000031343 1381 1.597 - - - 0.844 - - - 0.753 - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
20. hspg2 ENSDARG00000076564 3440 1.596 - - - - - - 0.719 0.877 - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
21. si:ch211-136a13.1 ENSDARG00000060927 250 1.587 - - - 0.851 - 0.736 - - - si:ch211-136a13.1 [Source:ZFIN;Acc:ZDB-GENE-050419-214]
22. OSBPL3 OSBPL3 145 1.579 - - - 0.866 - - - - 0.713
23. si:dkey-19h16.2 si:dkey-19h16.2 1077 1.563 - 0.719 - - - - - 0.844 -
24. mark3 mark3 1375 1.56 - - - - - 0.763 - 0.797 -
25. wnt7aa ENSDARG00000044827 645 1.549 - - - 0.820 - - - 0.729 - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
26. wu:fb12e11 wu:fb12e11 2332 1.543 - - - - - - - 0.799 0.744
27. acsbg1 ENSDARG00000062077 2020 1.539 - - - - - 0.730 - 0.809 - acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
28. akt2l ENSDARG00000103612 537 1.528 - - - - - 0.765 - - 0.763 v-akt murine thymoma viral oncogene homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040121-5]
29. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.525 - 0.816 - 0.709 - - - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
30. BX649554.3 BX649554.3 949 1.521 - - - 0.795 - - - 0.726 -
31. zgc:86811 ENSDARG00000035573 958 1.503 - 0.709 - - - - 0.794 - - zgc:86811 [Source:ZFIN;Acc:ZDB-GENE-040625-113]
32. sssca1 ENSDARG00000069109, ENSDARG00000114402 193 1.496 - - - - 0.732 - - - 0.764 Sjogren syndrome/scleroderma autoantigen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-102]
33. PIGB ENSDARG00000105011 277 1.493 - 0.762 - - - - - - 0.731 phosphatidylinositol glycan anchor biosynthesis, class B [Source:ZFIN;Acc:ZDB-GENE-040426-1216]
34. kdelc2 ENSDARG00000021408, ENSDARG00000112910 968 1.488 - 0.742 - - - - - - 0.746 KDEL (Lys-Asp-Glu-Leu) containing 2 [Source:ZFIN;Acc:ZDB-GENE-060810-142]
35. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 1.488 - - 0.724 0.764 - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
36. uap1 ENSDARG00000052170 1168 1.484 - - - 0.710 - - - 0.774 - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
37. SGPP1 ENSDARG00000060534 1802 1.473 - - - 0.765 - 0.708 - - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
38. mybbp1a ENSDARG00000078214 2458 1.47 - - - 0.715 - - 0.755 - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
39. BX957362.1 ENSDARG00000105682 1941 1.463 - - - 0.746 - 0.717 - - - uncharacterized LOC103911422 [Source:NCBI gene;Acc:103911422]
40. fam73a 336 1.448 - 0.716 - - - - 0.732 - - family with sequence similarity 73, member A, transcript variant X1
41. col6a1 ENSDARG00000074908 2339 1.442 - 0.741 - - - 0.701 - - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
42. relt ENSDARG00000099724 138 1.433 - - - - - - 0.728 - 0.705 RELT, TNF receptor [Source:ZFIN;Acc:ZDB-GENE-040426-2361]
43. cpeb3 ENSDARG00000060103 2367 1.407 - 0.705 - - - - 0.702 - - cytoplasmic polyadenylation element binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-090312-68]
44. myo6a ENSDARG00000044016 847 0.964 - - - - - - - 0.964 - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
45. rxfp2b ENSDARG00000019660 464 0.959 - - - - - - - 0.959 - relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]
46. FP102801.1_1 FP102801.1_1 238 0.957 - - - - - - - 0.957 -
47. si:dkey-97a13.9 si:dkey-97a13.9 169 0.957 - - - - - - - 0.957 -
48. CABZ01032488.1 ENSDARG00000099154 262 0.956 - - - - - - - 0.956 - wu:fb14d09 [Source:NCBI gene;Acc:100536795]
49. C22H19orf44 C22H19orf44 481 0.955 - - - - - - - 0.955 -
50. si:ch73-61d6.3 ENSDARG00000057826 274 0.955 - - - - - - - 0.955 - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
51. AIFM3 ENSDARG00000062780 358 0.955 - - - - - - - 0.955 - apoptosis-inducing factor, mitochondrion-associated, 3 [Source:ZFIN;Acc:ZDB-GENE-140619-2]
52. C9H2orf69 C9H2orf69 148 0.955 - - - - - - - 0.955 -
53. tbc1d10a tbc1d10a 462 0.954 - - - - - - - 0.954 -
54. si:ch211-233h19.2 ENSDARG00000042213 47 0.954 - - - - - - - 0.954 - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
55. zgc:113336 ENSDARG00000104078 147 0.954 - - - - - - - 0.954 - zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
56. nitr3a_1 ENSDARG00000110676 44 0.953 - - - - - - - 0.953 - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
57. pigm ENSDARG00000024277 86 0.952 - - - - - - - 0.952 - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
58. APBA3 APBA3 852 0.952 - - - - - - - 0.952 -
59. TRIM67 ENSDARG00000108787 290 0.952 - - - - - - - 0.952 - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
60. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.951 - - - - - - - 0.951 - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
61. CR848025.1 ENSDARG00000100501 35 0.951 - - - - - - - 0.951 - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
62. fancg ENSDARG00000024967, ENSDARG00000113462 82 0.951 - - - - - - - 0.951 - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
63. CABZ01041962.1 ENSDARG00000076082 690 0.951 - - - - - - - 0.951 - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
64. pak1ip1 ENSDARG00000044488 1995 0.951 - - - - - - - 0.951 - PAK1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8414]
65. htr3b ENSDARG00000061749 49 0.951 - - - - - - - 0.951 - 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]
66. ZNF76 ENSDARG00000013279 260 0.95 - - - - - - - 0.950 - zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
67. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 0.95 - - - - - - - 0.950 - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
68. si:dkey-10c21.1 ENSDARG00000079133 32 0.95 - - - - - - - 0.950 - si:dkey-10c21.1 [Source:ZFIN;Acc:ZDB-GENE-081104-302]
69. MSH4 ENSDARG00000075826 37 0.95 - - - - - - - 0.950 - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
70. GIPR ENSDARG00000025478 87 0.95 - - - - - - - 0.950 - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
71. CABZ01067945.1 CABZ01067945.1 469 0.95 - - - - - - - 0.950 -
72. si:ch211-218m3.16 ENSDARG00000044336 33 0.95 - - - - - - - 0.950 - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
73. FGD5 FGD5 250 0.95 - - - - - - - 0.950 -
74. si:dkey-11f4.20 ENSDARG00000100887 38 0.95 - - - - - - - 0.950 - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
75. zpcx ENSDARG00000059252, ENSDARG00000111002 33 0.95 - - - - - - - 0.950 - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
76. rpp30 ENSDARG00000027428 286 0.95 - - - - - - - 0.950 - ribonuclease P/MRP 30 subunit [Source:ZFIN;Acc:ZDB-GENE-050320-45]
77. meiob 75 0.95 - - - - - - - 0.950 - meiosis specific with OB domains
78. slc24a4a ENSDARG00000015425 1464 0.95 - - - - - - - 0.950 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 4a [Source:ZFIN;Acc:ZDB-GENE-050417-291]
79. si:dkeyp-87d1.1 ENSDARG00000104681 35 0.95 - - - - - - - 0.950 - si:dkeyp-87d1.1 [Source:ZFIN;Acc:ZDB-GENE-041014-75]
80. dnase1 ENSDARG00000012539 65 0.95 - - - - - - - 0.950 - deoxyribonuclease I [Source:ZFIN;Acc:ZDB-GENE-040718-423]
81. si:dkey-242e21.3 ENSDARG00000075723 77 0.95 - - - - - - - 0.950 - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
82. si:ch211-173p18.3_1 ENSDARG00000035821 36 0.95 - - - - - - - 0.950 - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
83. srrm2 ENSDARG00000037965 1967 0.95 - - - - - - - 0.950 - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
84. CR388228.1 ENSDARG00000117809 31 0.95 - - - - - - - 0.950 - uncharacterized LOC110437756 [Source:NCBI gene;Acc:110437756]
85. ADCYAP1R1 ADCYAP1R1 118 0.95 - - - - - - - 0.950 -
86. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 0.949 - - - - - - - 0.949 -
87. ccdc41 ccdc41 97 0.949 - - - - - - - 0.949 -
88. nmu ENSDARG00000043299 67 0.949 - - - - - - - 0.949 - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
89. pou2f2b pou2f2b 134 0.949 - - - - - - - 0.949 -
90. si:dkey-9i5.1 si:dkey-9i5.1 36 0.949 - - - - - - - 0.949 -
91. CR847543.1 ENSDARG00000086708 155 0.948 - - - - - - - 0.948 -
92. scpp8 ENSDARG00000093124 54 0.948 - - - - - - - 0.948 - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
93. rraga ENSDARG00000104149 515 0.948 - - - - - - - 0.948 - Ras-related GTP binding A [Source:ZFIN;Acc:ZDB-GENE-030131-4083]
94. si:ch211-193e13.5 ENSDARG00000052656 61 0.948 - - - - - - - 0.948 - si:ch211-193e13.5 [Source:ZFIN;Acc:ZDB-GENE-081104-158]
95. CABZ01088365.1 CABZ01088365.1 66 0.948 - - - - - - - 0.948 -
96. mapk4 ENSDARG00000017681, ENSDARG00000110581 303 0.948 - - - - - - - 0.948 - mitogen-activated protein kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2835]
97. kcnk9 ENSDARG00000104563 92 0.948 - - - - - - - 0.948 - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
98. ROBO3_1 ROBO3_1 468 0.947 - - - - - - - 0.947 -
99. PARP6_1 PARP6_1 331 0.947 - - - - - - - 0.947 -
100. gnb1a ENSDARG00000090454 481 0.947 - - - - - - - 0.947 - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]

There are 1135 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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