Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smad9

Gene Name Gene ID Reads Annotation
smad9 368 SMAD family member 9, transcript variant X1










Genes with expression patterns similar to smad9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smad9 368 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMAD family member 9, transcript variant X1
2. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.888 - - - - - 1.000 0.888 - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
3. cyp39a1 ENSDARG00000017982 4 1.851 - - - - - 1.000 0.851 - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
4. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.809 - - - 0.811 - - - 0.998 - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
5. fam213b ENSDARG00000029795 387 1.804 - 0.906 - - - - 0.898 - - family with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]
6. si:dkey-97l20.5 si:dkey-97l20.5 33 1.78 - - - - - 1.000 0.780 - -
7. TMEM74 26 1.749 - - - - - 0.956 0.793 - - transmembrane protein 74, transcript variant X3
8. FYCO1 FYCO1 194 1.735 - - - 0.862 - - 0.873 - -
9. agfg1b ENSDARG00000019526 472 1.722 0.871 - - 0.851 - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
10. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1.722 - - - - - 1.000 0.722 - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
11. si:ch211-165l15.1 si:ch211-165l15.1 10 1.705 - 0.705 - - - 1.000 - - -
12. CABZ01060030.1 ENSDARG00000106579 55 1.704 - 0.704 - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
13. farp2 ENSDARG00000016429 3133 1.703 - - - 0.730 - - - 0.973 - FERM, RhoGEF and pleckstrin domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2993]
14. rpz5 ENSDARG00000075718 1703 1.696 - 0.724 - - - - - 0.972 - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
15. ogdhb ENSDARG00000103428 63 1.692 - 0.776 - - - - 0.916 - - oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-090311-8]
16. dynlt1 ENSDARG00000045909 2451 1.684 - - - - - - 0.708 0.976 - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
17. KCNA3 KCNA3 748 1.676 - 0.778 - 0.898 - - - - -
18. AL954698.1 ENSDARG00000098202 377 1.669 - 0.705 - - - - 0.964 - -
19. SLC5A6 SLC5A6 179 1.662 - - - 0.890 - - 0.772 - -
20. fam5ca fam5ca 76 1.65 - - - - - 0.915 0.735 - -
21. VASH1 ENSDARG00000092716 33 1.646 - - - 0.918 - - - - 0.728 vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
22. C18H15orf59 C18H15orf59 80 1.643 - - - - - 0.872 0.771 - -
23. abhd2a ENSDARG00000025797 312 1.631 0.785 - - 0.846 - - - - - abhydrolase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-040426-784]
24. klf6b ENSDARG00000038561 27 1.622 - 0.716 - - - - 0.906 - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
25. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 1.614 - - - - - 0.840 0.774 - - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
26. gpx7 ENSDARG00000091511 3045 1.613 - - - 0.745 - - - 0.868 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
27. ogfrl1 ENSDARG00000061223 64 1.6 - 0.751 - - - 0.849 - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
28. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.596 - - - - - 0.838 0.758 - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
29. CABZ01080457.1 CABZ01080457.1 445 1.59 - - - 0.753 - - 0.837 - -
30. rapgef5b ENSDARG00000074307 112 1.586 - - - - - 0.757 0.829 - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
31. si:ch211-270n8.4 87 1.56 - 0.759 - - - - 0.801 - - si:ch211-270n8.4
32. stambpb ENSDARG00000086906 265 1.548 - 0.713 - - - - 0.835 - - STAM binding protein b [Source:ZFIN;Acc:ZDB-GENE-051127-31]
33. eps8l3 eps8l3 144 1.539 - 0.710 - - - - 0.829 - -
34. CENPF ENSDARG00000055133 436 1.536 - 0.714 - 0.822 - - - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
35. b2m ENSDARG00000053136 215 1.509 - 0.741 - - - - 0.768 - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
36. si:ch73-299h12.3 ENSDARG00000101790 590 1.506 0.787 0.719 - - - - - - - si:ch73-299h12.3 [Source:ZFIN;Acc:ZDB-GENE-081031-93]
37. si:dkey-229d11.5 ENSDARG00000094392 33 1.502 0.797 0.705 - - - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
38. als2a ENSDARG00000075111 29 1.491 - 0.705 - - - - 0.786 - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
39. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.477 0.754 - - - - 0.723 - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
40. hmga2 ENSDARG00000069912 20402 1.474 - - - - - - 0.719 0.755 - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
41. ralgapa1 ENSDARG00000076889 36 1.45 - 0.706 - - - - 0.744 - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
42. zgc:174877 ENSDARG00000079278 143 1.429 - 0.729 - - - 0.700 - - - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
43. HYAL2_1 HYAL2_1 266 1.429 - 0.710 - - - - 0.719 - -
44. nxph2a ENSDARG00000063224 75 1.425 - 0.710 - - - - 0.715 - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
45. ppp4ca ENSDARG00000070570 8395 1.405 - 0.703 - - - - 0.702 - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
46. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
47. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
48. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
49. itm1 itm1 32 1 - - - - - 1.000 - - -
50. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
51. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
52. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
53. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
54. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
55. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
56. PEG3_38 PEG3_38 521 1 - - - - - - - 1.000 -
57. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
58. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
59. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1 - - - - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
60. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
61. CU694256.1 ENSDARG00000097007 290 1 - - - - - - - 1.000 -
62. EXT1 EXT1 3 1 - - - - - 1.000 - - -
63. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
64. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
65. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
66. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
67. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
68. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
69. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
70. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
71. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
72. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
73. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
74. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - - 1.000 - - -
75. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
76. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
77. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
78. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
79. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
80. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
81. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
82. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
83. hip1r hip1r 10 1 - - - - - 1.000 - - -
84. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
85. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
86. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
87. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
88. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
89. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
90. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
91. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
92. zgc:174273 zgc:174273 374 1 - - - - - - - 1.000 -
93. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
94. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
95. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
96. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
97. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
98. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
99. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1 - - - - - 1.000 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
100. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -

There are 1563 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA