Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smad9

Gene Name Gene ID Reads Annotation
smad9 368 SMAD family member 9, transcript variant X1










Genes with expression patterns similar to smad9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smad9 368 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMAD family member 9, transcript variant X1
2. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.888 - - - - - 1.000 0.888 - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
3. cyp39a1 ENSDARG00000017982 4 1.851 - - - - - 1.000 0.851 - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
4. pgd ENSDARG00000015343, ENSDARG00000117150 2512 1.809 - - - 0.811 - - - 0.998 - phosphogluconate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2807]
5. fam213b ENSDARG00000029795 387 1.804 - 0.906 - - - - 0.898 - - family with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]
6. si:dkey-97l20.5 si:dkey-97l20.5 33 1.78 - - - - - 1.000 0.780 - -
7. TMEM74 26 1.749 - - - - - 0.956 0.793 - - transmembrane protein 74, transcript variant X3
8. FYCO1 FYCO1 194 1.735 - - - 0.862 - - 0.873 - -
9. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1.722 - - - - - 1.000 0.722 - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
10. agfg1b ENSDARG00000019526 472 1.722 0.871 - - 0.851 - - - - - ArfGAP with FG repeats 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1520]
11. si:ch211-165l15.1 si:ch211-165l15.1 10 1.705 - 0.705 - - - 1.000 - - -
12. CABZ01060030.1 ENSDARG00000106579 55 1.704 - 0.704 - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
13. farp2 ENSDARG00000016429 3133 1.703 - - - 0.730 - - - 0.973 - FERM, RhoGEF and pleckstrin domain protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2993]
14. rpz5 ENSDARG00000075718 1703 1.696 - 0.724 - - - - - 0.972 - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
15. ogdhb ENSDARG00000103428 63 1.692 - 0.776 - - - - 0.916 - - oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-090311-8]
16. dynlt1 ENSDARG00000045909 2451 1.684 - - - - - - 0.708 0.976 - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
17. KCNA3 KCNA3 748 1.676 - 0.778 - 0.898 - - - - -
18. AL954698.1 ENSDARG00000098202 377 1.669 - 0.705 - - - - 0.964 - -
19. SLC5A6 SLC5A6 179 1.662 - - - 0.890 - - 0.772 - -
20. fam5ca fam5ca 76 1.65 - - - - - 0.915 0.735 - -
21. VASH1 ENSDARG00000092716 33 1.646 - - - 0.918 - - - - 0.728 vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
22. C18H15orf59 C18H15orf59 80 1.643 - - - - - 0.872 0.771 - -
23. abhd2a ENSDARG00000025797 312 1.631 0.785 - - 0.846 - - - - - abhydrolase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-040426-784]
24. klf6b ENSDARG00000038561 27 1.622 - 0.716 - - - - 0.906 - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
25. HMCES ENSDARG00000077471, ENSDARG00000110218, ENSDARG00000111784 242 1.614 - - - - - 0.840 0.774 - - 5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]
26. gpx7 ENSDARG00000091511 3045 1.613 - - - 0.745 - - - 0.868 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
27. ogfrl1 ENSDARG00000061223 64 1.6 - 0.751 - - - 0.849 - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
28. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.596 - - - - - 0.838 0.758 - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
29. CABZ01080457.1 CABZ01080457.1 445 1.59 - - - 0.753 - - 0.837 - -
30. rapgef5b ENSDARG00000074307 112 1.586 - - - - - 0.757 0.829 - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
31. si:ch211-270n8.4 87 1.56 - 0.759 - - - - 0.801 - - si:ch211-270n8.4
32. stambpb ENSDARG00000086906 265 1.548 - 0.713 - - - - 0.835 - - STAM binding protein b [Source:ZFIN;Acc:ZDB-GENE-051127-31]
33. eps8l3 eps8l3 144 1.539 - 0.710 - - - - 0.829 - -
34. CENPF ENSDARG00000055133 436 1.536 - 0.714 - 0.822 - - - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
35. b2m ENSDARG00000053136 215 1.509 - 0.741 - - - - 0.768 - - beta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
36. si:ch73-299h12.3 ENSDARG00000101790 590 1.506 0.787 0.719 - - - - - - - si:ch73-299h12.3 [Source:ZFIN;Acc:ZDB-GENE-081031-93]
37. si:dkey-229d11.5 ENSDARG00000094392 33 1.502 0.797 0.705 - - - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
38. als2a ENSDARG00000075111 29 1.491 - 0.705 - - - - 0.786 - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
39. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.477 0.754 - - - - 0.723 - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
40. hmga2 ENSDARG00000069912 20402 1.474 - - - - - - 0.719 0.755 - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
41. ralgapa1 ENSDARG00000076889 36 1.45 - 0.706 - - - - 0.744 - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
42. HYAL2_1 HYAL2_1 266 1.429 - 0.710 - - - - 0.719 - -
43. zgc:174877 ENSDARG00000079278 143 1.429 - 0.729 - - - 0.700 - - - zgc:174877 [Source:ZFIN;Acc:ZDB-GENE-041008-66]
44. nxph2a ENSDARG00000063224 75 1.425 - 0.710 - - - - 0.715 - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
45. ppp4ca ENSDARG00000070570 8395 1.405 - 0.703 - - - - 0.702 - - protein phosphatase 4, catalytic subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-4433]
46. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
47. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
48. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
49. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
50. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
51. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
52. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
53. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
54. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
55. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
56. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
57. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
58. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
59. fam5b fam5b 45 1 - - - - - 1.000 - - -
60. si:rp71-84d19.2 si:rp71-84d19.2 34 1 - - - - - 1.000 - - -
61. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
62. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
63. dapk2 dapk2 24 1 - - - - - 1.000 - - -
64. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
65. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
66. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
67. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
68. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
69. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
70. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
71. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
72. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
73. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
74. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
75. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
76. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
77. ncs1b ENSDARG00000054186 252 1 - - - - - - - 1.000 - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
78. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
79. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
80. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
81. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
82. vip ENSDARG00000078247 10 1 - - - - - 1.000 - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
83. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
84. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
85. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
86. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
87. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
88. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
89. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
90. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
91. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
92. gltpb ENSDARG00000077962 5 1 - - - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
93. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
94. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
95. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
96. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
97. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
98. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
99. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
100. USF2 ENSDARG00000020228 3 1 - - - - - 1.000 - - - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]

There are 1563 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA