Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smad7

Gene Name Gene ID Reads Annotation
smad7 ENSDARG00000016858 1660 SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]










Genes with expression patterns similar to smad7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smad7 ENSDARG00000016858 1660 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
2. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 2.591 - 0.877 - - - 0.841 - 0.873 - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
3. hp1bp3 ENSDARG00000044669 23708 2.24 - - - - - 0.705 - 0.774 0.761 heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
4. epb41a ENSDARG00000099283 860 1.927 - - - - - - - 0.984 0.943 erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
5. b2ml ENSDARG00000015887 1060 1.857 - 0.907 - - - - - 0.950 - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
6. GATAD2B ENSDARG00000005834 3855 1.849 - - - - - 0.906 - 0.943 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
7. pafah1b1a ENSDARG00000032013 3183 1.844 - - - - - - - 0.906 0.938 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a [Source:ZFIN;Acc:ZDB-GENE-040116-2]
8. nbr1 nbr1 1161 1.824 - 0.883 - - - - - - 0.941
9. CABZ01080492.1 CABZ01080492.1 495 1.815 - 0.872 - - - - - - 0.943
10. COL4A3BP COL4A3BP 3288 1.814 - 0.894 - - - - - 0.920 -
11. ZC3H4 ENSDARG00000078355 1888 1.804 - - - - - 0.864 - - 0.940 zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
12. NAIF1_1 NAIF1_1 1336 1.796 - 0.831 - - - - - 0.965 -
13. LIMD2 ENSDARG00000078092 3414 1.789 - 0.872 - - - - - - 0.917 LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
14. ulk1b ENSDARG00000074481 1212 1.788 - 0.819 - - - - - 0.969 - unc-51 like autophagy activating kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071203-2]
15. syt16 ENSDARG00000030761 322 1.777 - 0.837 - - - - - 0.940 - synaptotagmin XVI [Source:ZFIN;Acc:ZDB-GENE-090313-210]
16. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 1.765 - 0.831 - - - - - - 0.934 si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
17. CR354611.2 CR354611.2 2040 1.756 - 0.779 - - - - - 0.977 -
18. dock7 ENSDARG00000078675 1995 1.752 - 0.772 - - - - - 0.980 - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
19. sipa1l2 ENSDARG00000061640 4545 1.743 - - - - - 0.856 - 0.887 - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
20. gpcpd1 ENSDARG00000016011 2563 1.737 - 0.818 - - - - - 0.919 - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
21. CABZ01038494.1 ENSDARG00000088258 908 1.737 - - - - - 0.769 - 0.968 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
22. fam199x ENSDARG00000009982 967 1.736 - 0.775 - - - - - 0.961 - family with sequence similarity 199, X-linked [Source:ZFIN;Acc:ZDB-GENE-040808-24]
23. CHMP4B CHMP4B 1387 1.712 - 0.763 - - - - - 0.949 -
24. dhx8 ENSDARG00000054707 2088 1.71 - 0.755 - - - - - 0.955 - DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-050809-39]
25. cnn3b ENSDARG00000029856 4807 1.708 - - - - - 0.793 - - 0.915 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
26. gltscr1l gltscr1l 782 1.708 - - - - - 0.726 - 0.982 -
27. thrap3b ENSDARG00000098228 4396 1.686 - 0.736 - - - - - 0.950 - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
28. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 1.673 - - - - - - 0.775 0.898 - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
29. nsfl1c ENSDARG00000087640 2226 1.669 - 0.734 - - - - - - 0.935 NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
30. srsf1b ENSDARG00000017843 2760 1.668 - - - - - 0.722 - - 0.946 serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
31. FRMD4A ENSDARG00000042249 2883 1.656 - 0.899 - - - 0.757 - - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
32. CDCA4 ENSDARG00000042319 7918 1.653 - - - - - 0.739 - 0.914 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
33. CYHR1 ENSDARG00000061057 2625 1.644 - - - - - 0.707 - - 0.937 cysteine/histidine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-060929-720]
34. arid1aa ENSDARG00000101710 3644 1.644 - 0.934 - - - 0.710 - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
35. hcfc1b ENSDARG00000012519 3633 1.637 - - - - - 0.705 - - 0.932 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
36. cand1 ENSDARG00000017841 8164 1.63 - - - - - 0.759 - - 0.871 cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
37. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.627 - - - - - 0.742 - 0.885 - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
38. kif22 ENSDARG00000102624 3694 1.625 - - - - - 0.727 - 0.898 - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
39. taf11 ENSDARG00000037855 2624 1.614 - - - - - 0.728 - 0.886 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
40. ldb1a ENSDARG00000010137 3035 1.609 - 0.895 - - - 0.714 - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
41. BX682552.2 BX682552.2 1427 1.609 - - - - - 0.726 - 0.883 -
42. fam69c ENSDARG00000105040 295 1.6 - 0.878 - - - - 0.722 - - family with sequence similarity 69, member C [Source:ZFIN;Acc:ZDB-GENE-030131-8001]
43. CEP350 ENSDARG00000058000 2887 1.597 - 0.866 - - - - 0.731 - - centrosomal protein 350 [Source:ZFIN;Acc:ZDB-GENE-030131-6975]
44. rac3b ENSDARG00000020795 1523 1.588 - 0.868 - - - 0.720 - - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
45. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.583 - - - - - 0.818 - 0.765 - heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
46. mab21l1 ENSDARG00000102047 4665 1.576 - 0.810 - - - 0.766 - - - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
47. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 1.569 - 0.806 - - - 0.763 - - - non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
48. lmbr1l ENSDARG00000004745 861 1.562 - 0.854 - - - 0.708 - - - limb development membrane protein 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9906]
49. spcs2 ENSDARG00000042823 10032 1.561 - - - - - 0.770 - 0.791 - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
50. st6galnac4 ENSDARG00000100804 583 1.561 - 0.778 - - - 0.783 - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-060322-6]
51. cog7 ENSDARG00000061372 789 1.554 - 0.838 - - - 0.716 - - - component of oligomeric golgi complex 7 [Source:ZFIN;Acc:ZDB-GENE-061013-463]
52. ftr67 ENSDARG00000098820 611 1.551 - 0.842 - - - 0.709 - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
53. ARFGAP1 ENSDARG00000101616 2952 1.537 - 0.784 - - - 0.753 - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
54. bri3bp ENSDARG00000010108 6295 1.535 - - - - - 0.767 - 0.768 - bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
55. RNF38 ENSDARG00000062055 3901 1.521 - 0.737 - - - 0.784 - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
56. vps39 ENSDARG00000074471 684 1.517 - 0.792 - - - 0.725 - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
57. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.514 - 0.806 - - - 0.708 - - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
58. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.479 - 0.756 - - - 0.723 - - - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
59. Sep-07 Sep-07 1827 1.472 - 0.745 - - - 0.727 - - -
60. arfgef1 ENSDARG00000063474 1131 1.468 - 0.765 - - - 0.703 - - - ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-030131-108]
61. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.468 - - - - - 0.704 - 0.764 - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
62. si:ch211-173p18.3 ENSDARG00000035821 1917 1.461 - - - - - 0.723 0.738 - - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
63. sarm1 ENSDARG00000010610 387 1.456 - - - - - 0.714 0.742 - - sterile alpha and TIR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040219-1]
64. dnmt3b dnmt3b 2522 1.421 - 0.712 - - - 0.709 - - -
65. bnip3la ENSDARG00000025468 3097 1.416 - 0.708 - - - - - 0.708 - BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
66. rab43 ENSDARG00000059404 1118 0.987 - - - - - - - 0.987 - RAB43, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-25]
67. PRRT2 ENSDARG00000103588 913 0.986 - - - - - - - 0.986 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
68. GRM2 GRM2 372 0.984 - - - - - - - 0.984 -
69. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 0.983 - - - - - - - 0.983 - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
70. ndnl2 ENSDARG00000058212 1042 0.983 - - - - - - - 0.983 - necdin-like 2 [Source:ZFIN;Acc:ZDB-GENE-031107-3]
71. irf2a ENSDARG00000007387 915 0.983 - - - - - - - 0.983 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
72. bsk146 ENSDARG00000099069 274 0.982 - - - - - - - 0.982 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
73. wdr47a ENSDARG00000078136 522 0.982 - - - - - - - 0.982 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
74. psmd5 ENSDARG00000059046 622 0.982 - - - - - - - 0.982 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
75. map7d2b ENSDARG00000045316 702 0.981 - - - - - - - 0.981 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
76. crb2a ENSDARG00000060106 1307 0.981 - - - - - - - 0.981 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
77. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.981 - - - - - - - 0.981 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
78. plk4 ENSDARG00000004576 688 0.981 - - - - - - - 0.981 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
79. anapc5 ENSDARG00000008461 434 0.981 - - - - - - - 0.981 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
80. GANAB_1 GANAB_1 685 0.981 - - - - - - - 0.981 -
81. zgc:65772 zgc:65772 2092 0.981 - - - - - - - 0.981 -
82. rapgef1a ENSDARG00000043593 416 0.98 - - - - - - - 0.980 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
83. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.98 - - - - - - - 0.980 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
84. SB:CB827 SB:CB827 245 0.98 - - - - - - - 0.980 -
85. RBM33 RBM33 1954 0.98 - - - - - - - 0.980 -
86. pcdh10b ENSDARG00000102824 732 0.98 - - - - - - - 0.980 - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
87. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.98 - - - - - - - 0.980 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
88. TTC28 ENSDARG00000114920 580 0.98 - - - - - - - 0.980 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
89. MANEAL ENSDARG00000056450 262 0.98 - - - - - - - 0.980 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
90. ppp1r8 ppp1r8 310 0.98 - - - - - - - 0.980 -
91. B3GNT1 B3GNT1 601 0.979 - - - - - - - 0.979 -
92. lrrc4.2 ENSDARG00000003020 235 0.979 - - - - - - - 0.979 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
93. LDLRAD4 LDLRAD4 1237 0.979 - - - - - - - 0.979 -
94. cetn2 ENSDARG00000101510 541 0.979 - - - - - - - 0.979 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
95. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.979 - - - - - - - 0.979 - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
96. sgsm3 ENSDARG00000019038 352 0.979 - - - - - - - 0.979 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
97. wdr92 ENSDARG00000037334 329 0.979 - - - - - - - 0.979 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
98. XKR7 ENSDARG00000026333 175 0.979 - - - - - - - 0.979 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
99. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.979 - - - - - - - 0.979 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
100. ift20 ENSDARG00000040556 285 0.979 - - - - - - - 0.979 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]

There are 1171 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA