Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smad6b

Gene Name Gene ID Reads Annotation
smad6b ENSDARG00000031763 12 SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]










Genes with expression patterns similar to smad6b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smad6b ENSDARG00000031763 12 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
2. ucn3l ENSDARG00000087241 29 2 1.000 - - - - - 1.000 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
3. traf1 ENSDARG00000069482 50 2 1.000 - - - - - 1.000 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
4. MDFI ENSDARG00000089564 8 2 1.000 - - - 1.000 - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
5. gabrr2b ENSDARG00000014057 9 2 - 1.000 - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
6. nphs2 ENSDARG00000042850 31 2 - 1.000 - - 1.000 - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
7. zgc:152977 ENSDARG00000077178 59 1.98 - 0.980 - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
8. SPDEF ENSDARG00000029930 60 1.94 - 0.940 - - - - 1.000 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
9. rdh14a ENSDARG00000039299 79 1.938 1.000 - - - - - 0.938 - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
10. CR677591.1 CR677591.1 19 1.913 - 0.974 - - - - 0.939 - -
11. SLC26A6 ENSDARG00000055835, ENSDARG00000097292 62 1.907 1.000 0.907 - - - - - - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
12. ca10b ENSDARG00000009568 8 1.904 - - - - 1.000 - 0.904 - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
13. si:dkey-13n15.11 ENSDARG00000078002 8 1.896 - 0.896 - - 1.000 - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
14. crfb13 crfb13 2 1.884 1.000 - - 0.884 - - - - -
15. b3gat3 ENSDARG00000001939 58 1.881 0.881 - - - - - 1.000 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
16. si:dkey-256e21.1 si:dkey-256e21.1 11 1.88 - - 0.880 - 1.000 - - - -
17. CR388163.4 CR388163.4 4 1.88 - - 0.880 - - - 1.000 - -
18. acoxl ENSDARG00000020149 14 1.88 - 1.000 0.880 - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
19. CABZ01044085.1 CABZ01044085.1 3 1.88 1.000 - 0.880 - - - - - -
20. gata4 ENSDARG00000098952 11 1.88 - - 0.880 - - - 1.000 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
21. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1.88 - - 0.880 - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
22. ppp2r3a ENSDARG00000077722 7 1.88 - - 0.880 - - - 1.000 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
23. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1.865 - 1.000 0.865 - - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
24. slc46a3 ENSDARG00000077313 14 1.845 - 1.000 - - - - 0.845 - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
25. si:dkey-3h3.3 ENSDARG00000067718 225 1.828 1.000 0.828 - - - - - - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
26. st6galnac ENSDARG00000086292 29 1.825 0.825 - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
27. CABZ01046997.2 CABZ01046997.2 7 1.819 - - - - 1.000 - - 0.819 -
28. f2rl1.1 ENSDARG00000068856 47 1.798 0.825 - - - - - 0.973 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
29. tas1r3 ENSDARG00000006341 3 1.753 1.000 - - - 0.753 - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
30. zgc:193801 ENSDARG00000076552 37 1.741 0.809 - - - - - 0.932 - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
31. si:ch211-139g16.8 ENSDARG00000093074 13 1.733 - - 0.733 - 1.000 - - - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
32. fank1 ENSDARG00000039657 9 1.728 1.000 - - - - - 0.728 - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
33. SUSD1 ENSDARG00000058839 4 1.727 - - 0.880 - - - - 0.847 - sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
34. si:ch211-203k16.3 ENSDARG00000069305 21 1.72 - - 0.880 - - - 0.840 - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
35. cyp46a1 cyp46a1 43 1.715 - 0.801 - - - - 0.914 - -
36. si:ch211-165d12.4 ENSDARG00000079353 330 1.7 - 0.884 - - - - 0.816 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
37. ggh ENSDARG00000037176 9 1.691 0.825 - - 0.866 - - - - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
38. slc13a3 ENSDARG00000069478, ENSDARG00000115362 100 1.688 - 0.984 - - - - 0.704 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2486]
39. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 1.686 - 0.903 - - - - 0.783 - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
40. U2 U2 52 1.679 - 0.740 - - - - 0.939 - -
41. PPM1J ENSDARG00000074690 109 1.675 - 0.921 - - - - 0.754 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
42. F7 ENSDARG00000034862 121 1.664 - 0.861 - - - - 0.803 - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
43. syne2a 63 1.664 - 0.938 - - - - 0.726 - - spectrin repeat containing, nuclear envelope 2a
44. socs8 socs8 128 1.648 - 0.811 - - - - 0.837 - -
45. si:ch211-92l17.1 ENSDARG00000094584 18 1.647 - 0.841 - - - - 0.806 - - si:ch211-92l17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-113]
46. n6amt2 7 1.633 - - 0.880 - 0.753 - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
47. INHBE INHBE 95 1.616 - - - - 0.717 - 0.899 - -
48. b3gnt3.2 ENSDARG00000054373 16 1.608 0.874 - - - - - 0.734 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tendem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-528]
49. fancf ENSDARG00000019250 111 1.607 0.715 - - - - - 0.892 - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
50. fam155b ENSDARG00000060152, ENSDARG00000114398 221 1.603 - 0.791 - - - - 0.812 - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
51. FP085391.2 FP085391.2 85 1.598 - - - 0.742 - - 0.856 - -
52. si:dkey-197c15.6 ENSDARG00000079401 745 1.587 0.726 - - - - - 0.861 - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
53. hsp70l_1 ENSDARG00000055723 72 1.575 0.825 - - - - - 0.750 - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
54. CU694453.2 CU694453.2 13 1.567 - - - 0.761 0.806 - - - -
55. scube3 ENSDARG00000011490 227 1.56 0.843 0.717 - - - - - - - signal peptide, CUB domain, EGF-like 3 [Source:ZFIN;Acc:ZDB-GENE-060717-1]
56. C11H1orf158 C11H1orf158 133 1.543 0.813 0.730 - - - - - - -
57. efhc1 ENSDARG00000009743 113 1.536 0.762 0.774 - - - - - - - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
58. CU469544.1 CU469544.1 219 1.519 - 0.761 - - - - 0.758 - -
59. si:dkey-165i8.5 si:dkey-165i8.5 21 1.478 - - - - - - 0.773 0.705 -
60. C2H5orf22 C2H5orf22 196 1.437 - 0.717 - - - - 0.720 - -
61. trhra ENSDARG00000076546 3 1 1.000 - - - - - - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
62. lars2 ENSDARG00000075337 31 1 1.000 - - - - - - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
63. slc23a2 ENSDARG00000017365, ENSDARG00000114446 6 1 - - - - 1.000 - - - - solute carrier family 23 (ascorbic acid transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-090521-3]
64. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 1.000 - - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
65. LRRC69 LRRC69 1 1 - - - - - - 1.000 - -
66. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - - 1.000 - -
67. si:dkeyp-15f12.4 si:dkeyp-15f12.4 2 1 - 1.000 - - - - - - -
68. XKR8 XKR8 9 1 - - - - - - 1.000 - -
69. sirt7 ENSDARG00000060645 1 1 - - - - 1.000 - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
70. cdk20 ENSDARG00000003867 27 1 1.000 - - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
71. fbxo32 ENSDARG00000040277 93 1 - - - - - - 1.000 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
72. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - - - 1.000 - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
73. zgc:173443 ENSDARG00000034403 26 1 - - - - - - 1.000 - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
74. si:ch211-76l23.4 ENSDARG00000096242 202 1 - 1.000 - - - - - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
75. dctn1a ENSDARG00000019743 45 1 - - - - - - 1.000 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
76. TRIM14_8 TRIM14_8 5 1 1.000 - - - - - - - -
77. urgcp ENSDARG00000036767 6 1 - - - - - - 1.000 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
78. CR387932.2 CR387932.2 3 1 - - - - 1.000 - - - -
79. pik3r5 ENSDARG00000102762 56 1 1.000 - - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
80. TNFRSF14_8 TNFRSF14_8 6 1 - - - - 1.000 - - - -
81. zgc:172109 zgc:172109 0 1 - - - - 1.000 - - - -
82. si:dkey-176f19.5 si:dkey-176f19.5 10 1 1.000 - - - - - - - -
83. ARMC6 ENSDARG00000103770 39 1 1.000 - - - - - - - - armadillo repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:25049]
84. CABZ01086801.1 CABZ01086801.1 41 1 - - - - 1.000 - - - -
85. BX324142.2 ENSDARG00000117006 1 1 - - - - 1.000 - - - -
86. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 1 - - - - - - 1.000 - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
87. PATL2 PATL2 10 1 - - - - 1.000 - - - -
88. SEMA6B SEMA6B 35 1 - - - - - - 1.000 - -
89. zgc:101560 1 1 - - - - 1.000 - - - - zgc:101560, transcript variant 2
90. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 - 1.000 - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
91. si:ch211-218m3.16 ENSDARG00000044336 33 1 - - - - - - 1.000 - - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
92. wnt3a ENSDARG00000058822 5 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
93. MDH1B ENSDARG00000018008 29 1 1.000 - - - - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
94. DEF6 DEF6 19 1 - 1.000 - - - - - - -
95. si:ch211-28e16.5 ENSDARG00000093376 2 1 - - - - 1.000 - - - - si:ch211-28e16.5 [Source:ZFIN;Acc:ZDB-GENE-090313-111]
96. CR352260.1 CR352260.1 11 1 - - - - 1.000 - - - -
97. npffr1l3 ENSDARG00000010712 18 1 - - - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
98. si:dkey-4p15.4 ENSDARG00000096658 0 1 - - - - 1.000 - - - - si:dkey-4p15.4 [Source:ZFIN;Acc:ZDB-GENE-121214-305]
99. zgc:152938 ENSDARG00000102586 97 1 - - - - - - 1.000 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
100. EGR4 ENSDARG00000077799 34 1 - 1.000 - - - - - - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]

There are 1360 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA