Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smad6b

Gene Name Gene ID Reads Annotation
smad6b ENSDARG00000031763 12 SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]










Genes with expression patterns similar to smad6b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smad6b ENSDARG00000031763 12 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
2. nphs2 ENSDARG00000042850 31 2 - 1.000 - - 1.000 - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
3. gabrr2b ENSDARG00000014057 9 2 - 1.000 - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
4. ucn3l ENSDARG00000087241 29 2 1.000 - - - - - 1.000 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
5. traf1 ENSDARG00000069482 50 2 1.000 - - - - - 1.000 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
6. MDFI ENSDARG00000089564 8 2 1.000 - - - 1.000 - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
7. zgc:152977 ENSDARG00000077178 59 1.98 - 0.980 - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
8. SPDEF ENSDARG00000029930 60 1.94 - 0.940 - - - - 1.000 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
9. rdh14a ENSDARG00000039299 79 1.938 1.000 - - - - - 0.938 - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
10. CR677591.1 CR677591.1 19 1.913 - 0.974 - - - - 0.939 - -
11. SLC26A6 ENSDARG00000055835, ENSDARG00000097292 62 1.907 1.000 0.907 - - - - - - - solute carrier family 26, member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]
12. ca10b ENSDARG00000009568 8 1.904 - - - - 1.000 - 0.904 - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
13. si:dkey-13n15.11 ENSDARG00000078002 8 1.896 - 0.896 - - 1.000 - - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
14. crfb13 crfb13 2 1.884 1.000 - - 0.884 - - - - -
15. b3gat3 ENSDARG00000001939 58 1.881 0.881 - - - - - 1.000 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
16. acoxl ENSDARG00000020149 14 1.88 - 1.000 0.880 - - - - - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
17. CR388163.4 CR388163.4 4 1.88 - - 0.880 - - - 1.000 - -
18. ppp2r3a ENSDARG00000077722 7 1.88 - - 0.880 - - - 1.000 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
19. CABZ01044085.1 CABZ01044085.1 3 1.88 1.000 - 0.880 - - - - - -
20. gata4 ENSDARG00000098952 11 1.88 - - 0.880 - - - 1.000 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
21. si:dkey-256e21.1 si:dkey-256e21.1 11 1.88 - - 0.880 - 1.000 - - - -
22. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1.88 - - 0.880 - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
23. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1.865 - 1.000 0.865 - - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
24. slc46a3 ENSDARG00000077313 14 1.845 - 1.000 - - - - 0.845 - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
25. si:dkey-3h3.3 ENSDARG00000067718 225 1.828 1.000 0.828 - - - - - - - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
26. st6galnac ENSDARG00000086292 29 1.825 0.825 - - - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
27. CABZ01046997.2 CABZ01046997.2 7 1.819 - - - - 1.000 - - 0.819 -
28. f2rl1.1 ENSDARG00000068856 47 1.798 0.825 - - - - - 0.973 - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061215-140]
29. tas1r3 ENSDARG00000006341 3 1.753 1.000 - - - 0.753 - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
30. zgc:193801 ENSDARG00000076552 37 1.741 0.809 - - - - - 0.932 - - zgc:193801 [Source:ZFIN;Acc:ZDB-GENE-081022-40]
31. si:ch211-139g16.8 ENSDARG00000093074 13 1.733 - - 0.733 - 1.000 - - - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
32. fank1 ENSDARG00000039657 9 1.728 1.000 - - - - - 0.728 - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
33. SUSD1 ENSDARG00000058839 4 1.727 - - 0.880 - - - - 0.847 - sushi domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060526-169]
34. si:ch211-203k16.3 ENSDARG00000069305 21 1.72 - - 0.880 - - - 0.840 - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
35. cyp46a1 cyp46a1 43 1.715 - 0.801 - - - - 0.914 - -
36. si:ch211-165d12.4 ENSDARG00000079353 330 1.7 - 0.884 - - - - 0.816 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
37. ggh ENSDARG00000037176 9 1.691 0.825 - - 0.866 - - - - - gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) [Source:ZFIN;Acc:ZDB-GENE-040426-2615]
38. slc13a3 ENSDARG00000069478, ENSDARG00000115362 100 1.688 - 0.984 - - - - 0.704 - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2486]
39. lrrc15 ENSDARG00000070792, ENSDARG00000110931 124 1.686 - 0.903 - - - - 0.783 - - leucine rich repeat containing 15 [Source:ZFIN;Acc:ZDB-GENE-031113-8]
40. U2 U2 52 1.679 - 0.740 - - - - 0.939 - -
41. PPM1J ENSDARG00000074690 109 1.675 - 0.921 - - - - 0.754 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
42. F7 ENSDARG00000034862 121 1.664 - 0.861 - - - - 0.803 - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
43. syne2a 63 1.664 - 0.938 - - - - 0.726 - - spectrin repeat containing, nuclear envelope 2a
44. socs8 socs8 128 1.648 - 0.811 - - - - 0.837 - -
45. si:ch211-92l17.1 ENSDARG00000094584 18 1.647 - 0.841 - - - - 0.806 - - si:ch211-92l17.1 [Source:ZFIN;Acc:ZDB-GENE-041210-113]
46. n6amt2 7 1.633 - - 0.880 - 0.753 - - - - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
47. INHBE INHBE 95 1.616 - - - - 0.717 - 0.899 - -
48. b3gnt3.2 ENSDARG00000054373 16 1.608 0.874 - - - - - 0.734 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tendem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-528]
49. fancf ENSDARG00000019250 111 1.607 0.715 - - - - - 0.892 - - FA complementation group F [Source:ZFIN;Acc:ZDB-GENE-060306-3]
50. fam155b ENSDARG00000060152, ENSDARG00000114398 221 1.603 - 0.791 - - - - 0.812 - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
51. FP085391.2 FP085391.2 85 1.598 - - - 0.742 - - 0.856 - -
52. si:dkey-197c15.6 ENSDARG00000079401 745 1.587 0.726 - - - - - 0.861 - - si:dkey-197c15.6 [Source:ZFIN;Acc:ZDB-GENE-060810-147]
53. hsp70l_1 ENSDARG00000055723 72 1.575 0.825 - - - - - 0.750 - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
54. CU694453.2 CU694453.2 13 1.567 - - - 0.761 0.806 - - - -
55. scube3 ENSDARG00000011490 227 1.56 0.843 0.717 - - - - - - - signal peptide, CUB domain, EGF-like 3 [Source:ZFIN;Acc:ZDB-GENE-060717-1]
56. C11H1orf158 C11H1orf158 133 1.543 0.813 0.730 - - - - - - -
57. efhc1 ENSDARG00000009743 113 1.536 0.762 0.774 - - - - - - - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
58. CU469544.1 CU469544.1 219 1.519 - 0.761 - - - - 0.758 - -
59. si:dkey-165i8.5 si:dkey-165i8.5 21 1.478 - - - - - - 0.773 0.705 -
60. C2H5orf22 C2H5orf22 196 1.437 - 0.717 - - - - 0.720 - -
61. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - - 1.000 - -
62. si:dkey-148b12.4 si:dkey-148b12.4 2 1 - - - - 1.000 - - - -
63. neu4 ENSDARG00000057677 1 1 - - - - 1.000 - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
64. BX901974.1 ENSDARG00000067592 2 1 - - - - - - 1.000 - -
65. scpp1 ENSDARG00000090416 1 1 - - - - 1.000 - - - - secretory calcium-binding phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090424-1]
66. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
67. si:dkey-203o21.2 si:dkey-203o21.2 0 1 - - - - 1.000 - - - -
68. si:ch211-73m21.2 si:ch211-73m21.2 5 1 - - - - 1.000 - - - -
69. trib1 ENSDARG00000110963 1 1 1.000 - - - - - - - - tribbles pseudokinase 1 [Source:ZFIN;Acc:ZDB-GENE-091207-4]
70. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
71. si:ch211-1e14.4 si:ch211-1e14.4 1 1 1.000 - - - - - - - -
72. efemp2b ENSDARG00000020811 116 1 1.000 - - - - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
73. pik3r5 ENSDARG00000102762 56 1 1.000 - - - - - - - - phosphoinositide-3-kinase, regulatory subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2308]
74. FAM185A ENSDARG00000019142 3 1 - - - - 1.000 - - - - family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
75. LRRK1 ENSDARG00000007398 2 1 - - - - 1.000 - - - - leucine-rich repeat kinase 1 [Source:ZFIN;Acc:ZDB-GENE-101019-2]
76. BX649498.2 BX649498.2 40 1 1.000 - - - - - - - -
77. l3mbtl3 ENSDARG00000025983 12 1 1.000 - - - - - - - - l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
78. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - - 1.000 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
79. BX537305.1 ENSDARG00000113834 10 1 - - - - - - 1.000 - -
80. BRSK2_2 BRSK2_2 3 1 1.000 - - - - - - - -
81. CU633477.1 CU633477.1 19 1 1.000 - - - - - - - -
82. mtus2 mtus2 22 1 - - - - - - 1.000 - -
83. nitr1i ENSDARG00000033963 0 1 - - - - 1.000 - - - - novel immune-type receptor 1i [Source:ZFIN;Acc:ZDB-GENE-001106-3]
84. C20H1orf95 C20H1orf95 12 1 - 1.000 - - - - - - -
85. BX914198.1 BX914198.1 5 1 - - - - 1.000 - - - -
86. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
87. si:dkey-41e15.4 si:dkey-41e15.4 1 1 - - - - - - 1.000 - -
88. si:ch211-266l9.1 si:ch211-266l9.1 18 1 1.000 - - - - - - - -
89. MMP20 MMP20 1 1 - - - - - - 1.000 - -
90. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1 - - - - - - 1.000 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
91. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
92. CABZ01048956.1 ENSDARG00000117474 253 1 - - - - 1.000 - - - - probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
93. si:ch211-80j13.1 si:ch211-80j13.1 2 1 - - - - 1.000 - - - -
94. BX548011.3 ENSDARG00000113526 2 1 - - - - 1.000 - - - -
95. rca2.2 ENSDARG00000095512 13 1 - - - - 1.000 - - - - regulator of complement activation group 2 gene 2 [Source:ZFIN;Acc:ZDB-GENE-060503-646]
96. CABZ01100187.1 CABZ01100187.1 191 1 - 1.000 - - - - - - -
97. cd79b ENSDARG00000104691 5 1 - - - - 1.000 - - - - CD79b molecule, immunoglobulin-associated beta [Source:ZFIN;Acc:ZDB-GENE-121219-1]
98. lpar6b ENSDARG00000069441 65 1 1.000 - - - - - - - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
99. slc23a2 ENSDARG00000017365, ENSDARG00000114446 6 1 - - - - 1.000 - - - - solute carrier family 23 (ascorbic acid transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-090521-3]
100. FRMD7 ENSDARG00000068958 17 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]

There are 1360 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA