Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smad5

Gene Name Gene ID Reads Annotation
smad5 ENSDARG00000037238 1684 SMAD family member 5 [Source:ZFIN;Acc:ZDB-GENE-990603-9]










Genes with expression patterns similar to smad5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smad5 ENSDARG00000037238 1684 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMAD family member 5 [Source:ZFIN;Acc:ZDB-GENE-990603-9]
2. creb3l2 ENSDARG00000063563 1284 2.531 - 0.862 - - - - - 0.755 0.914 cAMP responsive element binding protein 3-like 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1542]
3. elk3 ENSDARG00000018688, ENSDARG00000110853 1108 1.746 - 0.917 - - - - - - 0.829 ELK3, ETS-domain protein [Source:ZFIN;Acc:ZDB-GENE-030716-2]
4. ncana 1537 1.727 - - - - - - - 0.869 0.858 neurocan a
5. nucks1b ENSDARG00000012777 4468 1.715 - - - - - - 0.846 - 0.869 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
6. emilin3a ENSDARG00000078052 1652 1.699 - - - - - - - 0.760 0.939 elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
7. afap1l2 ENSDARG00000074806 367 1.694 - - - - - - - 0.767 0.927 actin filament associated protein 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-100318-1]
8. BX571949.1 BX571949.1 293 1.656 - - - - - - - 0.815 0.841
9. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.635 - 0.748 - - - - - - 0.887 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
10. BX511121.1 ENSDARG00000029997 1774 1.616 - - - - - - - 0.720 0.896
11. psmd12 ENSDARG00000052377 7763 1.609 - - - - - - 0.719 - 0.890 proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
12. cdipt ENSDARG00000070686 1318 1.607 - - - - - - 0.709 - 0.898 CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) [Source:ZFIN;Acc:ZDB-GENE-040426-2536]
13. sh3rf1 ENSDARG00000070470 1463 1.604 - - - - - - 0.809 - 0.795 SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
14. cbx1b ENSDARG00000054442 1206 1.6 - 0.743 - - - - - - 0.857 chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
15. slc25a32b ENSDARG00000026835 502 1.598 - 0.764 - - - - - - 0.834 solute carrier family 25 (mitochondrial folate carrier), member 32b [Source:ZFIN;Acc:ZDB-GENE-050306-39]
16. sel1l ENSDARG00000004581 2246 1.596 - - - - - - 0.734 - 0.862 SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
17. C11H19orf25 C11H19orf25 491 1.595 - - - - - - - 0.746 0.849
18. CABZ01078889.1 CABZ01078889.1 911 1.593 - 0.744 - - - - - - 0.849
19. alg2 ENSDARG00000070399 772 1.588 - 0.708 - - - - - - 0.880 asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
20. CU929394.1 CU929394.1 405 1.574 - 0.740 - - - - - - 0.834
21. sly1 sly1 2403 1.564 - - - - - - 0.704 - 0.860
22. si:dkey-13i19.8 ENSDARG00000093058 4617 1.549 - 0.735 - - - - - - 0.814 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
23. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.545 - 0.723 - - - - - - 0.822 furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
24. TP53BP1 ENSDARG00000079000 997 1.534 - - - - - - 0.712 - 0.822 tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
25. nrp2a_1 ENSDARG00000096546 3358 1.524 - 0.764 - - - - 0.760 - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
26. paip2b ENSDARG00000008706 4255 1.516 - 0.732 - - - - 0.784 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
27. vgll4l ENSDARG00000068409, ENSDARG00000110132 844 1.512 - 0.730 - - - - - 0.782 - vestigial like 4 like [Source:ZFIN;Acc:ZDB-GENE-070112-1682]
28. alcamb ENSDARG00000058538 5672 1.499 - 0.731 - - - - - - 0.768 activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
29. klf7a ENSDARG00000073857 1226 1.494 0.702 - - - - - - - 0.792 Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
30. ppap2b ppap2b 2900 1.493 - 0.758 - - - - - - 0.735
31. rbbp6 ENSDARG00000037919 4813 1.489 - - - - - 0.773 0.716 - - retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
32. vps35 ENSDARG00000008224 13245 1.475 - - - - - - 0.768 - 0.707 vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
33. ss18 ENSDARG00000002970 2618 1.474 - 0.723 - - - - - - 0.751 synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
34. eif3ja ENSDARG00000012603 6324 1.47 - - - - - - 0.756 - 0.714 eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
35. rreb1b ENSDARG00000042652 2731 1.466 - 0.760 - - - 0.706 - - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
36. cnih cnih 8292 1.46 - 0.704 - - - 0.756 - - -
37. C10H11orf30 C10H11orf30 1982 1.45 - 0.722 - - - - 0.728 - -
38. nde1 ENSDARG00000103902 557 1.438 - - - - - - 0.725 0.713 - nudE neurodevelopment protein 1 [Source:ZFIN;Acc:ZDB-GENE-050913-61]
39. hsdl2 ENSDARG00000002523 2746 1.438 - - - - - - 0.703 - 0.735 hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
40. GRAMD4 GRAMD4 1967 1.418 - - - - - - 0.717 - 0.701
41. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 0.936 - - - - - - - - 0.936 transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
42. rassf8b ENSDARG00000045485 1568 0.935 - - - - - - - - 0.935 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1338]
43. htatsf1 ENSDARG00000056649 2018 0.935 - - - - - - - - 0.935 HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
44. mfap2 ENSDARG00000059367 3774 0.926 - - - - - - - - 0.926 microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
45. prr14 ENSDARG00000089232 495 0.926 - - - - - - - - 0.926 proline rich 14 [Source:ZFIN;Acc:ZDB-GENE-030131-3785]
46. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 0.92 - - - - - - - - 0.920 si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
47. ehd3 ENSDARG00000007869 3238 0.917 - - - - - - - - 0.917 EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
48. myeov2 3351 0.914 - - - - - - - - 0.914 myeloma overexpressed 2
49. SP6 ENSDARG00000099880, ENSDARG00000110548 665 0.912 - - - - - - - - 0.912 Sp6 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-1824]
50. scel ENSDARG00000034677, ENSDARG00000110476, ENSDARG00000111222, ENSDARG00000116782 3270 0.91 - - - - - - - - 0.910 sciellin [Source:ZFIN;Acc:ZDB-GENE-030616-15]
51. qdpra ENSDARG00000040190 4064 0.91 - - - - - - - - 0.910 quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
52. dcun1d2 dcun1d2 1721 0.908 - - - - - - - - 0.908
53. ist1 ENSDARG00000051888 4536 0.904 - - - - - - - - 0.904 increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
54. dusp11 ENSDARG00000038156 2490 0.903 - - - - - - - - 0.903 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
55. adipor1b ENSDARG00000042717 1348 0.898 - - - - - - - - 0.898 adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
56. BX294110.1 ENSDARG00000096875 1761 0.898 - - - - - - - - 0.898
57. col4a3 ENSDARG00000003395 499 0.897 - - - - - - - - 0.897 collagen, type IV, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070802-4]
58. ptgs2a ENSDARG00000004539 1207 0.897 - - - - - - - - 0.897 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
59. copa ENSDARG00000004173 3977 0.895 - - - - - - - - 0.895 coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
60. ARHGEF15 ENSDARG00000100293 553 0.891 - - - - - - - - 0.891 Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
61. lman1 ENSDARG00000069980 2550 0.891 - - - - - - - - 0.891 lectin, mannose-binding, 1 [Source:ZFIN;Acc:ZDB-GENE-060201-4]
62. SERTAD4 ENSDARG00000089795 791 0.89 - - - - - - - - 0.890 SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
63. ypel5 ENSDARG00000088929 1011 0.889 - - - - - - - - 0.889 yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
64. prrg4 ENSDARG00000030753 1008 0.888 - - - - - - - - 0.888 proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
65. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 0.888 - - - - - - - - 0.888 putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
66. edem1 ENSDARG00000025094 1343 0.888 - - - - - - - - 0.888 ER degradation enhancer, mannosidase alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-808]
67. eci1 ENSDARG00000018002 2141 0.887 - - - - - - - - 0.887 enoyl-CoA delta isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6033]
68. NACC2 160 0.886 - - - - - - - - 0.886 NACC family member 2
69. klf6a ENSDARG00000029072 3758 0.886 - - - - - - - - 0.886 Kruppel-like factor 6a [Source:ZFIN;Acc:ZDB-GENE-021115-9]
70. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 0.884 - - - - - - - - 0.884 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
71. pak2a ENSDARG00000068177 8931 0.884 - - - - - - - - 0.884 p21 protein (Cdc42/Rac)-activated kinase 2a [Source:ZFIN;Acc:ZDB-GENE-021011-2]
72. AL929222.1 ENSDARG00000096994 1293 0.884 - - - - - - - - 0.884
73. lrp1b lrp1b 3216 0.883 - - - - - - - - 0.883
74. traf2b ENSDARG00000101036 429 0.881 - - - - - - - - 0.881 Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
75. atp5ia 4773 0.881 - - - - - - - - 0.881 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
76. hcfc2 ENSDARG00000058127 490 0.88 - - - - - - - 0.880 - host cell factor C2 [Source:ZFIN;Acc:ZDB-GENE-050417-203]
77. anapc16 ENSDARG00000013822 5857 0.878 - - - - - - - - 0.878 anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
78. vkorc1 ENSDARG00000086183 1212 0.878 - - - - - - - - 0.878 vitamin K epoxide reductase complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2286]
79. strbp ENSDARG00000021455 1279 0.878 - - - - - - - - 0.878 spermatid perinuclear RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030729-18]
80. waslb ENSDARG00000006283 2160 0.877 - - - - - - - - 0.877 Wiskott-Aldrich syndrome-like b [Source:ZFIN;Acc:ZDB-GENE-040426-718]
81. sdr16c5a ENSDARG00000016233 2413 0.877 - - - - - - - - 0.877 short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
82. 5S_rRNA_21 5S_rRNA_21 1323 0.875 - - - - - - 0.875 - -
83. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 0.873 - - - - - - - - 0.873 prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
84. arpc5a ENSDARG00000039142 5482 0.872 - 0.872 - - - - - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
85. cpne1 ENSDARG00000075536 4063 0.872 - - - - - - - - 0.872 copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
86. scoca ENSDARG00000087333 1739 0.872 - - - - - - - - 0.872 short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
87. srebf2 ENSDARG00000063438 1982 0.872 - 0.872 - - - - - - - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
88. ATF6B 960 0.871 - - - - - - - - 0.871 activating transcription factor 6 beta
89. wrap73 ENSDARG00000009557 515 0.87 - - - - - - - - 0.870 WD repeat containing, antisense to TP73 [Source:ZFIN;Acc:ZDB-GENE-030131-6313]
90. ecsit ENSDARG00000062834 896 0.869 - - - - - - - - 0.869 ECSIT signalling integrator [Source:ZFIN;Acc:ZDB-GENE-030131-1332]
91. pdcd11 ENSDARG00000052480 2791 0.869 - - - - - - 0.869 - - programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
92. KRTCAP2 ENSDARG00000070386 10103 0.869 - - - - - - - - 0.869 keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
93. eea1 ENSDARG00000062868 1126 0.869 - - - - - - - - 0.869 early endosome antigen 1 [Source:ZFIN;Acc:ZDB-GENE-041111-270]
94. MRPS12_1 MRPS12_1 2714 0.868 - - - - - - - - 0.868
95. ssr2 ENSDARG00000005230 31940 0.867 - - - - - - - - 0.867 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
96. HSCB HSCB 395 0.867 - 0.867 - - - - - - -
97. xpot ENSDARG00000099652 3026 0.866 - - - - - - - - 0.866 exportin, tRNA (nuclear export receptor for tRNAs) [Source:ZFIN;Acc:ZDB-GENE-041210-4]
98. ENSDARG00000086666 ENSDARG00000086666 2159 0.866 - 0.866 - - - - - - -
99. taf10 ENSDARG00000068641 3333 0.866 - - - - - - - - 0.866 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
100. rap2b ENSDARG00000103032 2080 0.866 - - - - - - - - 0.866 RAP2B, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2818]

There are 902 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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