Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for smad4

Gene Name Gene ID Reads Annotation
smad4 smad4 2519










Genes with expression patterns similar to smad4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smad4 smad4 2519 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 2.257 - 0.782 0.721 - - - 0.754 - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
3. znf410 ENSDARG00000008218 1807 1.993 - - 0.993 - - - - - 1.000 zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
4. PPP1R16B ENSDARG00000079860 390 1.779 - - 0.995 - - - 0.784 - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
5. inip ENSDARG00000028523 1925 1.765 - - 0.993 - - 0.772 - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
6. sfi1 ENSDARG00000053992 1075 1.765 - - - - - - 0.765 - 1.000 SFI1 centrin binding protein [Source:ZFIN;Acc:ZDB-GENE-080206-4]
7. ldb1a ENSDARG00000010137 3035 1.76 - - 0.956 - - 0.804 - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
8. wdr82 ENSDARG00000014083 3159 1.745 - - 0.968 - - 0.777 - - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
9. pycr1 pycr1 1258 1.733 - - 0.995 - - - 0.738 - -
10. fut8 fut8 652 1.726 - - 0.996 - - 0.730 - - -
11. selt1b 1396 1.717 - 0.727 0.990 - - - - - - selenoprotein T, 1b
12. dek ENSDARG00000070108 2262 1.715 - - 0.918 - - 0.797 - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
13. fam50a ENSDARG00000024895 3020 1.711 - - 0.975 - - - - 0.736 - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
14. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.709 - - 0.986 - - - 0.723 - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
15. smarce1 ENSDARG00000016871 9628 1.708 - - 0.738 - - - - - 0.970 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
16. ppp6r3 ENSDARG00000013379 2912 1.681 - - 0.958 - - - 0.723 - - protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
17. crebbpa ENSDARG00000104609 1739 1.677 - - 0.930 - - 0.747 - - - CREB binding protein a [Source:ZFIN;Acc:ZDB-GENE-050208-439]
18. arid2 ENSDARG00000007413 4413 1.657 0.728 - 0.929 - - - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
19. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.599 - 0.722 0.877 - - - - - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
20. rfc2 ENSDARG00000014274 1533 1.57 - 0.836 - - 0.734 - - - - replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]
21. rpp25l ENSDARG00000070131 492 1.485 - - - - 0.719 0.766 - - - ribonuclease P/MRP 25 subunit-like [Source:ZFIN;Acc:ZDB-GENE-040718-275]
22. COL4A3BP COL4A3BP 3288 1.479 - - 0.730 - - - 0.749 - -
23. KCTD9 KCTD9 147 1.457 0.739 - - - - 0.718 - - -
24. FAM210B ENSDARG00000052638 1755 1 - - - - - - - - 1.000 family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
25. oxnad1 ENSDARG00000062664 2684 1 - - - - - - - - 1.000 oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]
26. haus1 ENSDARG00000058968 1336 1 - - - - - - - - 1.000 HAUS augmin-like complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-091204-387]
27. KCNAB1 KCNAB1 918 1 - - - - - - - - 1.000
28. taok2b_1 ENSDARG00000100620 2082 1 - - - - - - - - 1.000 TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
29. rnd1 rnd1 1086 1 - - - - - - - - 1.000
30. tulp4 tulp4 1520 1 - - - - - - - - 1.000
31. iars2 ENSDARG00000044134 1990 1 - - - - - - - - 1.000 isoleucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-608]
32. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 0.999 - - - - - - - - 0.999 chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
33. CCDC150 CCDC150 991 0.999 - - - - - - - - 0.999
34. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 0.999 - - - - - - - - 0.999 RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
35. fbxo18 ENSDARG00000062983, ENSDARG00000113423 1458 0.999 - - - - - - - - 0.999 F-box protein helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041210-99]
36. C3H16orf72 C3H16orf72 2059 0.999 - - - - - - - - 0.999
37. glrx3 ENSDARG00000098785 4138 0.999 - - - - - - - - 0.999 glutaredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-22]
38. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 0.999 - - - - - - - - 0.999 guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
39. fbxw11a ENSDARG00000104806 1815 0.998 - - - - - - - - 0.998 F-box and WD repeat domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-030131-6305]
40. HMGXB4_1 HMGXB4_1 1122 0.998 - - - - - - - - 0.998
41. rhag ENSDARG00000019253 2974 0.998 - - - - - - - - 0.998 Rh associated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-8229]
42. rab14 ENSDARG00000074246 4084 0.998 - - - - - - - - 0.998 RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
43. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 0.998 - - - - - - - - 0.998 GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
44. stat5.1 stat5.1 3337 0.997 - - - - - - - - 0.997
45. CU467832.1 CU467832.1 635 0.997 - - 0.997 - - - - - -
46. add1 ENSDARG00000103962 4938 0.997 - - - - - - - - 0.997 adducin 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-030909-2]
47. vipas39 ENSDARG00000103690 280 0.997 - - 0.997 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
48. zmiz1a ENSDARG00000074502 3920 0.997 - - - - - - - - 0.997 zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
49. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.997 - - 0.997 - - - - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
50. RAB39B RAB39B 482 0.996 - - 0.996 - - - - - -
51. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.996 - - 0.996 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
52. lrp12 ENSDARG00000098845 999 0.996 - - 0.996 - - - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
53. SNX19 SNX19 350 0.996 - - 0.996 - - - - - -
54. U1_25 U1_25 283 0.996 - - 0.996 - - - - - -
55. gata1b ENSDARG00000059130 151 0.996 - - 0.996 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
56. zgc:171673 ENSDARG00000102473 256 0.996 - - 0.996 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
57. nrg1 ENSDARG00000104314 1081 0.996 - - 0.996 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
58. mfsd4a mfsd4a 179 0.996 - - 0.996 - - - - - -
59. f2rl1.2 ENSDARG00000077540 822 0.996 - - 0.996 - - - - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
60. pld1b ENSDARG00000057125 325 0.996 - - 0.996 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
61. usp8 ENSDARG00000063719 643 0.996 - - 0.996 - - - - - - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
62. sema3fa ENSDARG00000011163 759 0.995 - - 0.995 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
63. DNAJC16 ENSDARG00000059699 507 0.995 - - 0.995 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
64. PGBD4_3 PGBD4_3 861 0.995 - - 0.995 - - - - - -
65. si:dkey-176f19.6 si:dkey-176f19.6 373 0.995 - - 0.995 - - - - - -
66. clybl ENSDARG00000029729 690 0.995 - - 0.995 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
67. qki2 ENSDARG00000010018 2230 0.995 - - 0.995 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
68. rbm39a ENSDARG00000011613 4520 0.995 - - - - - - - - 0.995 RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
69. ndufa7 ENSDARG00000036684 6051 0.995 - - - - - - - - 0.995 NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
70. pank1b ENSDARG00000010098 3202 0.995 - - 0.995 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
71. CLIP4 ENSDARG00000096961 363 0.995 - - 0.995 - - - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
72. pkib ENSDARG00000053110 527 0.995 - - 0.995 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
73. zgc:113227 ENSDARG00000058874 266 0.995 - - 0.995 - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
74. echs1 ENSDARG00000001578 3733 0.995 - - - - - - - - 0.995 enoyl CoA hydratase, short chain, 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030616-617]
75. gbas gbas 735 0.994 - - 0.994 - - - - - -
76. si:ch211-152c2.3 ENSDARG00000045898 3448 0.994 - - - - - - - - 0.994 si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
77. lgi1a ENSDARG00000020493 1218 0.994 - - 0.994 - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
78. dyrk1ab ENSDARG00000023814 1769 0.994 - - 0.994 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
79. lipt1 ENSDARG00000025233 385 0.994 - - 0.994 - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
80. pnn ENSDARG00000015851 1269 0.994 - - 0.994 - - - - - - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
81. klhl15 ENSDARG00000001930 793 0.994 - - 0.994 - - - - - - kelch-like family member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-99]
82. msxd msxd 1750 0.994 - - - - - - - - 0.994
83. atp1b1b ENSDARG00000076833 10324 0.994 - - - - - - - - 0.994 ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
84. SSBP4 ENSDARG00000056483 5156 0.994 - - - - - - - - 0.994 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
85. blcap ENSDARG00000052073 8646 0.994 - - - - - - - - 0.994 bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
86. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.994 - - 0.994 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
87. MED8 ENSDARG00000114425 459 0.994 - - 0.994 - - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
88. PATZ1 ENSDARG00000076584 1116 0.993 - - 0.993 - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
89. wu:fc26g07 wu:fc26g07 1165 0.993 - - 0.993 - - - - - -
90. gins4 ENSDARG00000016044 671 0.993 - - 0.993 - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
91. gga3 ENSDARG00000103667 675 0.993 - - 0.993 - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
92. slain2 ENSDARG00000032114 798 0.993 - - 0.993 - - - - - - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
93. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.993 - - 0.993 - - - - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
94. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 0.993 - - 0.993 - - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
95. cln6a ENSDARG00000077584 1090 0.993 - - 0.993 - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
96. phf12a ENSDARG00000074303 1025 0.993 - - 0.993 - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
97. mrpl22 ENSDARG00000109961 1374 0.993 - - 0.993 - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
98. hemk1 ENSDARG00000078894 397 0.992 - - 0.992 - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
99. pou6f1 ENSDARG00000011570 1501 0.992 - - 0.992 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
100. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 0.992 - - 0.992 - - - - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]

There are 846 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA