Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for smad3a

Gene Name Gene ID Reads Annotation
smad3a ENSDARG00000036096, ENSDARG00000117146 2668 SMAD family member 3a [Source:ZFIN;Acc:ZDB-GENE-000509-3]










Genes with expression patterns similar to smad3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. smad3a ENSDARG00000036096, ENSDARG00000117146 2668 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMAD family member 3a [Source:ZFIN;Acc:ZDB-GENE-000509-3]
2. pitpnbl ENSDARG00000015310, ENSDARG00000110980 3266 2.502 - - 0.955 - - 0.728 - 0.819 - phosphatidylinositol transfer protein, beta, like [Source:ZFIN;Acc:ZDB-GENE-040426-2791]
3. nsa2 ENSDARG00000007708 6329 2.447 - - 0.890 - - - - 0.803 0.754 NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-488]
4. tead1a ENSDARG00000028159 3574 1.869 - - 0.958 - - - - 0.911 - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
5. TSSC4 ENSDARG00000036144 1994 1.797 - - 0.924 - - - - 0.873 - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
6. CABZ01038494.1 ENSDARG00000088258 908 1.77 - 0.853 - - - - - 0.917 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
7. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.757 - 0.820 - - - - - 0.937 - family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
8. GATAD2B ENSDARG00000005834 3855 1.756 - - - - - - 0.829 0.927 - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
9. atf4b2 atf4b2 4734 1.745 - - - - - - - 0.933 0.812
10. apip ENSDARG00000003132 1212 1.742 - 0.797 0.945 - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
11. hipk3b ENSDARG00000062082 1248 1.736 - - 0.948 - - - - 0.788 - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
12. sun1 ENSDARG00000055350 3622 1.732 - 0.797 0.935 - - - - - - Sad1 and UNC84 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-551]
13. arl4aa ENSDARG00000099918 1391 1.731 - 0.807 - - - - - 0.924 - ADP-ribosylation factor-like 4aa [Source:ZFIN;Acc:ZDB-GENE-040426-1878]
14. pvrl2l ENSDARG00000063390 1112 1.7 - 0.748 0.952 - - - - - - poliovirus receptor-related 2 like [Source:ZFIN;Acc:ZDB-GENE-060503-249]
15. epn2 ENSDARG00000008377 5458 1.689 - - 0.939 - - - - - 0.750 epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
16. ecm2 ENSDARG00000071549 1527 1.683 - - 0.899 - 0.784 - - - - extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
17. rbm4.2 ENSDARG00000055080 5241 1.681 - - - - - - - 0.869 0.812 RNA binding motif protein 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3019]
18. zgc:92360 ENSDARG00000038151 2161 1.68 - 0.753 0.927 - - - - - - zgc:92360 [Source:ZFIN;Acc:ZDB-GENE-040718-470]
19. dnajc10 ENSDARG00000074727 1523 1.68 - - 0.970 - - - - - 0.710 DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
20. twist3 ENSDARG00000019646 1221 1.677 - - 0.950 - - - - - 0.727 twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
21. psmd7 ENSDARG00000102417 4732 1.676 - - 0.899 - - 0.777 - - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
22. ndufaf2 ENSDARG00000069286, ENSDARG00000114828 1563 1.673 0.704 - 0.969 - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040808-28]
23. tmbim1 tmbim1 1005 1.671 - 0.725 0.946 - - - - - -
24. ube2i ube2i 13024 1.668 - - - - - - 0.791 0.877 -
25. zgc:65772 zgc:65772 2092 1.66 - - - - - - - 0.904 0.756
26. hdac4 ENSDARG00000098349 1370 1.659 - - 0.950 - - 0.709 - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
27. CR387996.1 ENSDARG00000097774 3037 1.652 - - - - - - - 0.916 0.736
28. zgc:110425 ENSDARG00000058479 5216 1.65 - - 0.846 - 0.804 - - - - zgc:110425 [Source:ZFIN;Acc:ZDB-GENE-050522-103]
29. arid4a ENSDARG00000043873 4176 1.648 - - 0.943 - - - 0.705 - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
30. FP016176.1 FP016176.1 7030 1.64 - - 0.938 - - - 0.702 - -
31. gipc1 ENSDARG00000104483 2913 1.637 - - - - - - 0.712 0.925 - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
32. pgam5 ENSDARG00000035608 4044 1.634 - - - - - - - 0.896 0.738 PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
33. clasp2 ENSDARG00000020345 3382 1.633 - - - - - - - 0.895 0.738 cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
34. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 1.628 - - 0.843 - - - - - 0.785 cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
35. ppm1g ENSDARG00000075559 6516 1.624 - - - - - - - 0.889 0.735 protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
36. ntd5 ENSDARG00000040944 4988 1.615 - - 0.902 - 0.713 - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
37. CHMP4B CHMP4B 1387 1.614 - - - - - - - 0.863 0.751
38. max ENSDARG00000024844 6035 1.609 - - - - - 0.793 - 0.816 - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
39. cnppd1 ENSDARG00000027078 3778 1.604 - - 0.889 - - 0.715 - - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
40. arpc1b ENSDARG00000027063 1532 1.592 - 0.825 - - - - - 0.767 - actin related protein 2/3 complex, subunit 1B [Source:ZFIN;Acc:ZDB-GENE-030131-7414]
41. kmt2cb ENSDARG00000075560 4816 1.59 - - - - - 0.843 - - 0.747 lysine (K)-specific methyltransferase 2Cb [Source:ZFIN;Acc:ZDB-GENE-070705-340]
42. dab2ipa ENSDARG00000069484 1138 1.586 - - - - - - 0.732 - 0.854 DAB2 interacting protein a [Source:ZFIN;Acc:ZDB-GENE-081104-516]
43. sec62 ENSDARG00000019951 3724 1.583 - 0.725 - - - - - 0.858 - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
44. BAZ2B BAZ2B 3285 1.565 - - - - - - 0.755 0.810 -
45. CTBP1 ENSDARG00000057007, ENSDARG00000115804 2088 1.559 - 0.738 - - - - - - 0.821 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
46. atp6ap2 ENSDARG00000008735 5096 1.557 - 0.765 - - - - - - 0.792 ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
47. lpp ENSDARG00000023578 3581 1.548 - - 0.816 - - - - - 0.732 LIM domain containing preferred translocation partner in lipoma [Source:ZFIN;Acc:ZDB-GENE-040426-918]
48. SMAD4 SMAD4 3233 1.546 - - - - - - - 0.759 0.787
49. srsf11 ENSDARG00000098574 12801 1.536 - - 0.808 - - - - - 0.728 serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
50. dldh ENSDARG00000008785 15202 1.532 - - 0.830 - - - - 0.702 - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
51. g2e3 ENSDARG00000001313 1485 1.526 - - - - - 0.719 - - 0.807 G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
52. gsk3b ENSDARG00000017803 3438 1.525 - - - - - - 0.737 - 0.788 glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
53. arl6ip5b ENSDARG00000016238 1622 1.523 0.789 0.734 - - - - - - - ADP-ribosylation factor-like 6 interacting protein 5b [Source:ZFIN;Acc:ZDB-GENE-040718-223]
54. CU302436.2 CU302436.2 587 1.518 - 0.814 - - - - - - 0.704
55. arf1l arf1l 9119 1.517 - - 0.706 - - - - 0.811 -
56. rrm1 ENSDARG00000014017 7296 1.505 - - - - - - 0.741 0.764 - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
57. uba1 ENSDARG00000037559 11579 1.482 - - 0.703 - - - 0.779 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
58. wdfy1 ENSDARG00000005425 3628 1.462 - 0.737 - - - - - - 0.725 WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
59. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.44 - - 0.734 - - 0.706 - - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
60. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.433 0.726 - - - - - 0.707 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
61. ide ENSDARG00000075570 4331 1.432 - - - - - - 0.717 - 0.715 insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
62. lypla2 ENSDARG00000053656 8971 1.41 - - - - - 0.705 0.705 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
63. kif2c ENSDARG00000076228 2281 0.964 - - 0.964 - - - - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
64. brd7 ENSDARG00000008380 3654 0.963 - - 0.963 - - - - - - bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
65. il17rd ENSDARG00000098359 1153 0.959 - - 0.959 - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
66. zmynd11 ENSDARG00000057249, ENSDARG00000114501 2067 0.958 - - 0.958 - - - - - - zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
67. anapc10 ENSDARG00000090152 1406 0.958 - - 0.958 - - - - - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
68. itsn1 ENSDARG00000000086 684 0.957 - - 0.957 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
69. ppp1r14c ENSDARG00000077341 1587 0.957 - - 0.957 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
70. esf1 ENSDARG00000008740 1206 0.956 - - 0.956 - - - - - - ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4917]
71. TMEM54 TMEM54 1882 0.956 - - 0.956 - - - - - -
72. bcl2l10 ENSDARG00000026766 1426 0.956 - - 0.956 - - - - - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
73. PTDSS2 ENSDARG00000101018 881 0.955 - - 0.955 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
74. sf3a2 ENSDARG00000021107 2929 0.954 - - 0.954 - - - - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
75. slc2a10 ENSDARG00000090820 637 0.954 - - 0.954 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
76. wnt10a ENSDARG00000017155 491 0.953 - - 0.953 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
77. si:ch211-250c4.3 si:ch211-250c4.3 677 0.953 - - 0.953 - - - - - -
78. galnt1 ENSDARG00000061335 1648 0.953 - - 0.953 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
79. mbtps2 ENSDARG00000057577 1285 0.952 - - 0.952 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
80. rarga ENSDARG00000034117 1238 0.952 - - 0.952 - - - - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
81. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.952 - - 0.952 - - - - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
82. si:ch211-42i9.4 si:ch211-42i9.4 1448 0.952 - - 0.952 - - - - - -
83. cwc25 ENSDARG00000003382 2134 0.952 - - 0.952 - - - - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
84. zgc:56585 ENSDARG00000026236 704 0.952 - - 0.952 - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
85. ZNHIT6 ENSDARG00000095817 355 0.951 - - 0.951 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
86. CABZ01008011.1 CABZ01008011.1 761 0.951 - - 0.951 - - - - - -
87. yipf5 ENSDARG00000007279 2334 0.951 - - 0.951 - - - - - - Yip1 domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1057]
88. edc3 ENSDARG00000051931 780 0.951 - - 0.951 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
89. prpf4ba ENSDARG00000008784 936 0.95 - - 0.950 - - - - - - pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
90. phgdh ENSDARG00000001873 8325 0.95 - - 0.950 - - - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
91. elovl7b ENSDARG00000100185 2032 0.949 - - 0.949 - - - - - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
92. arpc5a ENSDARG00000039142 5482 0.949 - - 0.949 - - - - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
93. dnajc3 dnajc3 802 0.949 - - 0.949 - - - - - -
94. sema3fb ENSDARG00000055373 834 0.948 - - 0.948 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
95. CABZ01074130.1 ENSDARG00000105274 26501 0.948 - - 0.948 - - - - - -
96. C2CD2 ENSDARG00000105000 2573 0.948 - - 0.948 - - - - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
97. si:ch211-173m16.2 ENSDARG00000093284 186 0.948 - - 0.948 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
98. GIT1 ENSDARG00000039489 1157 0.948 - - 0.948 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
99. FBXW7 ENSDARG00000060994 1675 0.948 - - 0.948 - - - - - - F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
100. prdm1a ENSDARG00000002445 1340 0.948 - - 0.948 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]

There are 937 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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