Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slx4

Gene Name Gene ID Reads Annotation
slx4 ENSDARG00000061414, ENSDARG00000093798 44 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]










Genes with expression patterns similar to slx4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slx4 ENSDARG00000061414, ENSDARG00000093798 44 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
2. si:dkey-7e14.3 ENSDARG00000086055 50 2.677 0.822 - - - 0.950 0.905 - - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
3. MAP7_1 MAP7_1 42 2.44 0.773 0.808 - - - 0.859 - - -
4. fosl1a ENSDARG00000015355 139 1.869 - - - 0.908 - 0.961 - - - FOS-like antigen 1a [Source:ZFIN;Acc:ZDB-GENE-061207-7]
5. slc27a6 ENSDARG00000046053 57 1.869 - - - - - 0.970 0.899 - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
6. FAM200A FAM200A 19 1.853 - 1.000 - - - 0.853 - - -
7. si:ch211-135f11.1 166 1.836 - - - - 0.926 0.910 - - - si:ch211-135f11.1, transcript variant X3
8. si:ch211-102c2.4 ENSDARG00000079387 101 1.832 - - - - 0.945 0.887 - - - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
9. CABZ01087025.1 ENSDARG00000117232 10 1.817 - - - 0.922 - 0.895 - - -
10. SBNO2_1 SBNO2_1 8 1.814 0.862 - - 0.952 - - - - -
11. sybu ENSDARG00000060112 22 1.805 0.835 - - - - 0.970 - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
12. si:ch73-103l1.2 ENSDARG00000096505 17 1.801 0.862 - - - - - 0.939 - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
13. CR388095.2 ENSDARG00000117604 76 1.789 0.862 - - - - - 0.927 - -
14. CABZ01054962.1 CABZ01054962.1 91 1.789 - - - - 0.928 0.861 - - -
15. si:ch211-119c24.1 si:ch211-119c24.1 17 1.753 - 0.808 - - - 0.945 - - -
16. tph1a ENSDARG00000029432, ENSDARG00000114918 24 1.75 - - - - 0.948 - 0.802 - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
17. CU681846.1 CU681846.1 86 1.75 - - - - 0.914 0.836 - - -
18. SDSL ENSDARG00000074698 34 1.748 - - - - - 0.970 - - 0.778 serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
19. atr ENSDARG00000079625 231 1.743 - - - - 0.796 - 0.947 - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
20. TDRD7B ENSDARG00000077523 124 1.739 - - - - 0.887 - 0.852 - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
21. ppm1nb ENSDARG00000057032 77 1.734 - 0.863 - - 0.871 - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative) [Source:ZFIN;Acc:ZDB-GENE-071004-34]
22. zgc:173702_1 ENSDARG00000110229 24 1.732 - - - - - 0.958 - - 0.774 zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
23. CABZ01117977.1 CABZ01117977.1 9 1.731 - - - - 0.953 - - - 0.778
24. CABZ01035189.1 CABZ01035189.1 1070 1.722 - - - 0.854 - - 0.868 - -
25. si:dkey-94e7.2 ENSDARG00000068474 14 1.719 - - - - - 0.970 - - 0.749 si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
26. bend5 ENSDARG00000075624 10 1.716 - - - - - 0.970 - - 0.746 BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
27. SNORD30 SNORD30 34 1.711 - - - - - 0.937 - - 0.774
28. nkiras2_1 ENSDARG00000052594 31 1.71 - - - 0.740 - 0.970 - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
29. cntn5 ENSDARG00000021584 30 1.706 - - - 0.767 - - 0.939 - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
30. vax2 ENSDARG00000058702 175 1.702 - - - - - 0.945 0.757 - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
31. si:ch211-255g12.7 si:ch211-255g12.7 44 1.701 - - - - - 0.791 0.910 - -
32. cldnj ENSDARG00000058880 59 1.695 0.908 - - - - 0.787 - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
33. sept4a ENSDARG00000010385 75 1.671 - 0.808 - - - - 0.863 - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
34. colm colm 36 1.657 - - - 0.717 0.940 - - - -
35. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1.656 0.842 - - - - - 0.814 - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
36. fmn2b ENSDARG00000061778 179 1.652 - 0.808 - - 0.844 - - - - formin 2b [Source:ZFIN;Acc:ZDB-GENE-080225-35]
37. trmt2b ENSDARG00000033967 127 1.649 - 0.783 - - - 0.866 - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
38. ACSL1 ACSL1 240 1.648 - - - - - 0.903 0.745 - -
39. lhfpl2a ENSDARG00000009653 35 1.645 0.748 - - - - - 0.897 - - LHFPL tetraspan subfamily member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1839]
40. slc25a35 ENSDARG00000102783 129 1.631 0.863 - - - - 0.768 - - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
41. STARD10 ENSDARG00000097718 181 1.628 0.703 - - - - 0.925 - - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
42. BX323050.1 BX323050.1 116 1.624 - - - - - 0.846 0.778 - -
43. ZNF784_4 ZNF784_4 113 1.623 - - - - - 0.841 0.782 - -
44. adcy5 ENSDARG00000091342 122 1.623 - 0.798 - - - 0.825 - - - adenylate cyclase 5 [Source:ZFIN;Acc:ZDB-GENE-081104-470]
45. flt1 ENSDARG00000019371, ENSDARG00000111797 128 1.612 - 0.798 - - 0.814 - - - - fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) [Source:ZFIN;Acc:ZDB-GENE-050407-1]
46. pi4kab ENSDARG00000062823 197 1.607 0.744 - - - 0.863 - - - - phosphatidylinositol 4-kinase, catalytic, alpha b [Source:ZFIN;Acc:ZDB-GENE-080220-34]
47. si:dkey-261e22.5 si:dkey-261e22.5 68 1.604 - 0.708 - - - 0.896 - - -
48. kcnip1b ENSDARG00000034808, ENSDARG00000111766 136 1.601 0.754 - - - 0.847 - - - - Kv channel interacting protein 1 b [Source:ZFIN;Acc:ZDB-GENE-041212-57]
49. tgs1 190 1.593 - - - 0.815 0.778 - - - - trimethylguanosine synthase 1, transcript variant X1
50. CABZ01073736.1 ENSDARG00000099438 81 1.586 - - - - 0.773 0.813 - - -
51. SPIN4 SPIN4 120 1.586 - - - - 0.716 0.870 - - -
52. si:ch211-151h10.2 ENSDARG00000068250 14 1.582 - 0.808 - - - - - - 0.774 si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]
53. zp3a.1 ENSDARG00000042129 18 1.578 - 0.808 - - - - 0.770 - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
54. RCVRN RCVRN 66 1.577 - - - - - 0.877 - - 0.700
55. zgc:173594 57 1.571 - 0.808 - 0.763 - - - - - zgc:173594
56. lsm14b ENSDARG00000025386 23 1.561 - 0.808 - 0.753 - - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
57. CU638695.1 CU638695.1 90 1.56 0.753 - - - 0.807 - - - -
58. map4k2l map4k2l 248 1.559 0.822 0.737 - - - - - - -
59. znhit2 ENSDARG00000030805 197 1.554 0.817 - - - - 0.737 - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
60. si:ch211-229i14.2 ENSDARG00000086048 19 1.541 - 0.808 - - - - - - 0.733 si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
61. CU207301.4 CU207301.4 192 1.539 - 0.716 - - 0.823 - - - -
62. AGAP2 ENSDARG00000099874 151 1.53 0.715 - - - 0.815 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
63. ap4m1 ENSDARG00000056871 160 1.522 - 0.752 - - - - 0.770 - - adaptor related protein complex 4 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-040718-421]
64. PBX1 PBX1 148 1.507 - 0.719 - - - - - 0.788 -
65. cxcr3.2 ENSDARG00000041041, ENSDARG00000113356 36 1.493 - - 0.785 - - - 0.708 - - chemokine (C-X-C motif) receptor 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041114-186]
66. AL935128.1 AL935128.1 238 1.492 - - - - - 0.784 0.708 - -
67. metap1d ENSDARG00000019715, ENSDARG00000112086 236 1.488 0.739 - - - - 0.749 - - - methionyl aminopeptidase type 1D (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-050522-71]
68. gpn2 ENSDARG00000103127 304 1.48 0.751 - - - - 0.729 - - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
69. prr15la ENSDARG00000025615 77 1.476 0.750 - - - - - 0.726 - - proline rich 15-like a [Source:ZFIN;Acc:ZDB-GENE-040801-218]
70. si:dkey-178a21.3 si:dkey-178a21.3 23 1.448 - - 0.705 - - - - - 0.743
71. si:dkey-43f9.4 si:dkey-43f9.4 180 1.444 0.716 - - - - 0.728 - - -
72. si:dkey-79c1.1 ENSDARG00000093179 11 1 - 1.000 - - - - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
73. MICU3 MICU3 231 1 - 1.000 - - - - - - -
74. trip4 ENSDARG00000098074 79 1 - 1.000 - - - - - - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
75. zgc:174654 zgc:174654 54 1 - 1.000 - - - - - - -
76. phox2a ENSDARG00000007406 470 1 - - - - - - 1.000 - - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
77. nhlrc2 ENSDARG00000089581, ENSDARG00000113639 40 1 - 1.000 - - - - - - - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
78. zgc:77938 ENSDARG00000088366 74 1 - 1.000 - - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
79. edn1 ENSDARG00000036912 74 1 - 1.000 - - - - - - - endothelin 1 [Source:ZFIN;Acc:ZDB-GENE-000920-1]
80. rbp1b rbp1b 36 1 - 1.000 - - - - - - -
81. odf3b ENSDARG00000114397, ENSDARG00000116899 21 1 - 1.000 - - - - - - - outer dense fiber of sperm tails 3B [Source:ZFIN;Acc:ZDB-GENE-030131-7464]
82. CABZ01020188.1 CABZ01020188.1 61 1 - 1.000 - - - - - - -
83. LRFN5_1 LRFN5_1 96 1 - 1.000 - - - - - - -
84. Metazoa_SRP_6 Metazoa_SRP_6 7 1 - 1.000 - - - - - - -
85. GSG1 GSG1 10 1 - 1.000 - - - - - - -
86. syt5b ENSDARG00000011640 70 1 - 1.000 - - - - - - - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
87. zmiz1b ENSDARG00000102279 26 1 - 1.000 - - - - - - - zinc finger, MIZ-type containing 1b [Source:ZFIN;Acc:ZDB-GENE-120206-3]
88. si:ch211-283l16.1 ENSDARG00000112586 131 1 - 1.000 - - - - - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
89. CR385054.1_1 ENSDARG00000100106 43 1 - - - - - 1.000 - - -
90. extl2 ENSDARG00000063191 118 1 - 1.000 - - - - - - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
91. ndst2b ENSDARG00000060678 453 1 - 1.000 - - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b [Source:ZFIN;Acc:ZDB-GENE-100430-2]
92. CABZ01065246.2 CABZ01065246.2 45 0.985 - - - - - 0.985 - - -
93. tnxb 30 0.98 - - - - - 0.980 - - - tenascin XB
94. chico ENSDARG00000019588 77 0.977 - - - - - 0.977 - - - chico [Source:ZFIN;Acc:ZDB-GENE-000210-28]
95. si:ch73-30l9.1 ENSDARG00000095891 42 0.975 - - - - - 0.975 - - - si:ch73-30l9.1 [Source:ZFIN;Acc:ZDB-GENE-110411-132]
96. dennd6b ENSDARG00000011605 412 0.974 - - - - - 0.974 - - - DENN/MADD domain containing 6B [Source:ZFIN;Acc:ZDB-GENE-030131-9382]
97. slc16a6a ENSDARG00000102793 60 0.974 - - - - - - 0.974 - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
98. SYTL1 ENSDARG00000070094 282 0.973 - - - - 0.973 - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
99. trim35-27 ENSDARG00000035009 62 0.971 - - - - - - 0.971 - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
100. ush2a ENSDARG00000029482 10 0.971 - - - - - - 0.971 - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]

There are 1456 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA