Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sltm

Gene Name Gene ID Reads Annotation
sltm ENSDARG00000052728 6234 SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]










Genes with expression patterns similar to sltm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sltm ENSDARG00000052728 6234 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
2. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 3.189 0.725 0.941 - - - 0.770 0.753 - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
3. lmnb1 ENSDARG00000044299 9817 2.505 0.883 - 0.838 - - - 0.784 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
4. akirin2 ENSDARG00000058729 13245 2.426 0.743 0.979 - - - - 0.704 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
5. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.388 0.706 - 0.959 - - - 0.723 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
6. alyref ENSDARG00000077732 25934 2.382 - 0.723 - - - 0.757 - - 0.902 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
7. SERBP1 SERBP1 9276 2.314 - - 0.868 - - - 0.741 0.705 -
8. anp32e ENSDARG00000054804 11017 2.309 - - 0.838 - 0.724 - 0.747 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
9. shfm1 7620 2.28 - - 0.854 - 0.705 - 0.721 - - split hand/foot malformation (ectrodactyly) type 1
10. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 2.212 - - - - 0.740 0.745 0.727 - - phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
11. zc3h15 ENSDARG00000015889 3861 1.974 - 0.977 - - - - - - 0.997 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
12. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.972 - 0.976 - - - - - - 0.996 proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
13. ttc3 ENSDARG00000086075 2157 1.948 - 0.978 0.970 - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
14. eaf2 ENSDARG00000010432 3768 1.942 - 0.972 0.970 - - - - - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
15. wu:fb12e11 wu:fb12e11 2332 1.93 - 0.976 0.954 - - - - - -
16. rpl7l1 ENSDARG00000042864 3256 1.92 - 0.960 0.960 - - - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
17. acadvl ENSDARG00000016687 5329 1.91 - 0.976 0.934 - - - - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
18. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 1.906 - 0.960 0.946 - - - - - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
19. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.827 - 0.988 - - - - 0.839 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
20. GIGYF1_1 GIGYF1_1 1865 1.794 - - 0.964 - - - 0.830 - -
21. SRGAP3 ENSDARG00000060309 5353 1.786 - 0.941 - - - 0.845 - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
22. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 1.779 - 0.894 0.885 - - - - - - adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
23. rbx1 ENSDARG00000038030 14611 1.763 0.801 - - - - - - - 0.962 ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
24. bag6 ENSDARG00000075892 3782 1.762 0.803 0.959 - - - - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
25. nabp1a ENSDARG00000004692, ENSDARG00000115485 1843 1.759 - 0.987 - - - - - 0.772 - nucleic acid binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041212-71]
26. kpna2 ENSDARG00000038066 7954 1.753 - 0.965 0.788 - - - - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
27. usp7 ENSDARG00000073710 7017 1.751 - - - - - 0.867 0.884 - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
28. C19H1orf85 C19H1orf85 1587 1.749 - 0.982 - - - - 0.767 - -
29. cul4b ENSDARG00000060510 6053 1.747 - 0.968 - - - - 0.779 - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
30. gars ENSDARG00000059070 17015 1.746 - 0.901 0.845 - - - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
31. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.74 - 0.955 - - - - 0.785 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
32. hadhab ENSDARG00000060594 3664 1.738 0.802 - 0.936 - - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-041111-204]
33. mrpl37 ENSDARG00000062916 1600 1.736 0.775 - 0.961 - - - - - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
34. lsm7 ENSDARG00000058328 7191 1.732 0.867 - 0.865 - - - - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
35. eif5 ENSDARG00000003681 7986 1.726 - - 0.851 - - 0.875 - - - eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
36. hexim1 ENSDARG00000036482 4317 1.719 - - 0.947 - - - 0.772 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
37. lman2lb ENSDARG00000088663 1641 1.719 - 0.992 - - - - - 0.727 - lectin, mannose-binding 2-like b [Source:ZFIN;Acc:ZDB-GENE-060929-256]
38. ssbp4 ENSDARG00000056483 10196 1.712 - - 0.901 - - - 0.811 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
39. rtn3_1 ENSDARG00000091348 3290 1.711 - 0.969 - - - - 0.742 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
40. polr2d ENSDARG00000076509 3386 1.71 - - 0.972 - - - 0.738 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
41. anapc16 ENSDARG00000013822 5857 1.71 - 0.976 - - - 0.734 - - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
42. ube2v2 ENSDARG00000028198 23341 1.709 - - - - - - 0.740 - 0.969 ubiquitin-conjugating enzyme E2 variant 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2919]
43. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 1.708 - 0.978 - - - - 0.730 - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
44. tmem2 2572 1.708 - - 0.963 - - - 0.745 - - transmembrane protein 2, transcript variant X1
45. htatsf1 ENSDARG00000056649 2018 1.707 - - 0.957 - - - 0.750 - - HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
46. SLC12A6 SLC12A6 883 1.706 - 0.981 - - - - 0.725 - -
47. ndc80 ENSDARG00000071694 1162 1.698 - - 0.961 - - - - 0.737 - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
48. gng5 ENSDARG00000039830 12102 1.698 - 0.917 - - - - 0.781 - - guanine nucleotide binding protein (G protein), gamma 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9966]
49. trpc4apa ENSDARG00000018840 2543 1.696 - 0.975 - - - - 0.721 - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
50. safb ENSDARG00000020467 5608 1.695 - - 0.959 - - 0.736 - - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
51. med19a ENSDARG00000037392, ENSDARG00000114246 2231 1.69 - - 0.965 - - 0.725 - - - mediator complex subunit 19a [Source:ZFIN;Acc:ZDB-GENE-060929-232]
52. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.688 - 0.943 - - - - 0.745 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
53. rybpb ENSDARG00000053459 1464 1.686 - - 0.963 - - - - 0.723 - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
54. cdc14b ENSDARG00000021483 4958 1.685 - 0.979 - - - - - 0.706 - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
55. mccc2 ENSDARG00000017571 5635 1.685 0.747 - 0.938 - - - - - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
56. axin2 ENSDARG00000100149 4223 1.679 0.713 - 0.966 - - - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
57. gle1 ENSDARG00000043559 1362 1.679 - 0.978 - - - - 0.701 - - GLE1 RNA export mediator homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040831-4]
58. C9H2orf15 C9H2orf15 1975 1.678 - 0.975 - - - - 0.703 - -
59. mri1 ENSDARG00000075754 2567 1.678 - - 0.966 - - - 0.712 - - methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
60. sgce ENSDARG00000012138 912 1.677 - 0.976 - - - - 0.701 - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
61. srrm2 ENSDARG00000037965 1967 1.676 - - 0.958 - - - - 0.718 - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
62. ube4b ENSDARG00000037017 8012 1.676 - - 0.965 - - - 0.711 - - ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
63. snx12 ENSDARG00000019060 9563 1.675 - - 0.956 - - - 0.719 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
64. C6H2orf40 C6H2orf40 4224 1.675 - - 0.955 - - 0.720 - - -
65. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.673 - - 0.948 - - - 0.725 - - heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
66. setb ENSDARG00000003920 21788 1.673 - - - - - - 0.702 - 0.971 SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
67. eif3c ENSDARG00000016443 18003 1.67 - - 0.711 - - - - - 0.959 eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
68. agrn ENSDARG00000079388, ENSDARG00000110127 5806 1.666 - 0.955 - - - - - - 0.711 agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
69. PELP1 ENSDARG00000079313 5771 1.665 - 0.956 - - - 0.709 - - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
70. rnf10 ENSDARG00000079687 6768 1.655 - - 0.937 - - - 0.718 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
71. atp2b4 5891 1.649 - - 0.844 - - - 0.805 - - ATPase, Ca++ transporting, plasma membrane 4
72. ppp3r1a ENSDARG00000092659 9729 1.644 - 0.890 - - - - - 0.754 - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
73. oaz1b ENSDARG00000104782 37623 1.639 - - 0.908 - - - - - 0.731 ornithine decarboxylase antizyme 1b [Source:ZFIN;Acc:ZDB-GENE-020731-5]
74. cnn2 ENSDARG00000035858 18201 1.632 - 0.712 - - - - - - 0.920 calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
75. atf4b1 atf4b1 17316 1.629 - - 0.910 - - 0.719 - - -
76. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.626 - - 0.886 - - - - 0.740 - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
77. nusap1 ENSDARG00000002403 6953 1.618 - - 0.842 - - - 0.776 - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
78. lypla2 ENSDARG00000053656 8971 1.616 - - 0.880 - - - 0.736 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
79. pum1 ENSDARG00000099256 5017 1.609 - - 0.906 - - - 0.703 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
80. AGAP3 ENSDARG00000087822 4128 1.598 - - - - - 0.833 0.765 - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
81. ift172 ENSDARG00000041870 1239 1.597 - - - - - - 0.838 0.759 - intraflagellar transport 172 [Source:ZFIN;Acc:ZDB-GENE-040827-1]
82. gmfb ENSDARG00000028327 6522 1.592 - - - - - 0.712 - - 0.880 glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
83. si:ch73-46j18.5 ENSDARG00000092467 6002 1.589 - - - - - 0.852 0.737 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
84. cltca ENSDARG00000043493, ENSDARG00000115370 12561 1.579 - - 0.828 - - - 0.751 - - clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
85. Sep-06 Sep-06 5465 1.577 0.779 - - - - - 0.798 - -
86. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.576 - - 0.844 - - - 0.732 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
87. smo ENSDARG00000002952 6411 1.575 - - - - - - 0.801 0.774 - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
88. hnrnpk ENSDARG00000018914 8841 1.555 - - 0.821 - - - 0.734 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
89. zgc:100918 ENSDARG00000087243 5451 1.543 - - 0.835 - - 0.708 - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
90. drg1 ENSDARG00000039345 7545 1.537 - - 0.827 - - - 0.710 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
91. map3k7 ENSDARG00000020469 2845 1.537 0.739 - - - - 0.798 - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
92. fryl ENSDARG00000040001 3256 1.534 - - - - - 0.787 0.747 - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
93. vta1 ENSDARG00000013732 6072 1.533 0.723 - - - - 0.810 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
94. midn ENSDARG00000018524 7559 1.531 - - - - - 0.770 0.761 - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
95. MKI67 ENSDARG00000091150 11038 1.517 - - - 0.706 - - 0.811 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
96. ddx39ab ENSDARG00000015111 11619 1.516 - - 0.779 - - - 0.737 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
97. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 1.515 - - - - - - 0.788 0.727 - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
98. TNRC6A ENSDARG00000079688 14433 1.513 - - - - - 0.726 0.787 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
99. MATR3 MATR3 3962 1.511 - - - - - - 0.803 0.708 -
100. nr2f6b ENSDARG00000003165 5855 1.507 0.711 - - - - - 0.796 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]

There are 1083 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA