Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slitrk3b

Gene Name Gene ID Reads Annotation
slitrk3b ENSDARG00000074739 19 SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]










Genes with expression patterns similar to slitrk3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slitrk3b ENSDARG00000074739 19 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
2. slc5a9 ENSDARG00000005518 16 2.773 - - 0.909 - - 0.864 1.000 - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
3. MAP3K2 ENSDARG00000062884 34 2 1.000 - - - - 1.000 - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
4. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.967 - - - - - 0.967 1.000 - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
5. cntnap5b ENSDARG00000075189 16 1.967 - - - - - 0.967 1.000 - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
6. opcml ENSDARG00000013005 18 1.967 - - - - - 0.967 1.000 - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
7. rab11bb_1 ENSDARG00000090086 7 1.956 - - - - - 0.956 1.000 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
8. BX248582.3 BX248582.3 3 1.956 - - - - - 0.956 1.000 - -
9. si:dkey-266f7.10 ENSDARG00000086613 7 1.956 - - - - - 0.956 1.000 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
10. rbfox3l rbfox3l 34 1.956 - - - - - 0.956 1.000 - -
11. TENM2 ENSDARG00000037122 48 1.956 - - - - - 0.956 1.000 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
12. dnm1a ENSDARG00000010042 43 1.941 0.941 - - - - - 1.000 - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
13. si:dkey-115f9.3 7 1.909 - - 0.909 - - - 1.000 - - si:dkey-115f9.3, transcript variant X2
14. pigf ENSDARG00000032780 7 1.909 - - 0.909 - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
15. pde8a ENSDARG00000087941 11 1.866 - - 0.866 - - - 1.000 - - phosphodiesterase 8A [Source:ZFIN;Acc:ZDB-GENE-070112-622]
16. C24H16orf11 C24H16orf11 32 1.865 - - 0.909 - - 0.956 - - -
17. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1.86 0.860 - - - 1.000 - - - -
18. cx52.9 ENSDARG00000086453 7 1.86 0.860 - - - - - 1.000 - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
19. CABZ01066439.2 CABZ01066439.2 5 1.86 0.860 - - - - - 1.000 - -
20. erbb4a ENSDARG00000063207 55 1.86 0.860 - - - - - 1.000 - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
21. st8sia1_1 ENSDARG00000098221 16 1.849 - - - - - 0.967 0.882 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
22. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.842 0.842 - - - - 1.000 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
23. ACAP2 ENSDARG00000060783 9 1.839 - - - - - 0.839 1.000 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
24. tecrl2 tecrl2 11 1.839 - - - - - 0.839 1.000 - -
25. si:dkey-15f23.2 si:dkey-15f23.2 2 1.837 - - - - 0.837 - 1.000 - -
26. cacna1g ENSDARG00000089913 19 1.822 - - - - - 0.822 1.000 - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:ZFIN;Acc:ZDB-GENE-090514-2]
27. ntng2a ENSDARG00000077367 43 1.822 - - - - - 0.822 1.000 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
28. trhra ENSDARG00000076546 3 1.816 0.860 - - - - 0.956 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
29. BRSK2_2 BRSK2_2 3 1.816 0.860 - - - - 0.956 - - -
30. gpr173 ENSDARG00000042922 238 1.811 - - - - - 0.811 1.000 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
31. si:ch211-39a7.1 ENSDARG00000037427 31 1.8 - - - - - 0.956 0.844 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
32. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1.773 - - - 0.773 - - 1.000 - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
33. MPP3_1 MPP3_1 88 1.769 - - - - - 0.901 0.868 - -
34. sstr3 ENSDARG00000014477 14 1.766 - - - - - - 1.000 - 0.766 somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
35. SLC35F4 ENSDARG00000103124 55 1.761 - - - - - 0.888 0.873 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
36. hes2.2 ENSDARG00000068168 197 1.758 0.941 - - - - - 0.817 - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
37. PDXP ENSDARG00000109823 195 1.758 1.000 - - - - - 0.758 - - pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:ZFIN;Acc:ZDB-GENE-080723-69]
38. PFKL PFKL 9 1.754 - - 0.754 - - - 1.000 - -
39. CABZ01061873.1 CABZ01061873.1 51 1.747 - - - - - 0.956 0.791 - -
40. CABZ01075242.1 ENSDARG00000114227 9 1.746 - - 0.909 - 0.837 - - - -
41. GPR137B GPR137B 50 1.743 - - - - - 0.967 0.776 - -
42. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.738 - - - - - 0.962 0.776 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
43. neflb ENSDARG00000012426 298 1.73 1.000 - - - - - 0.730 - - neurofilament, light polypeptide b [Source:ZFIN;Acc:ZDB-GENE-060312-44]
44. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.727 - - - - - 0.804 0.923 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
45. cacng2a ENSDARG00000032565 99 1.712 - - - - - 0.830 0.882 - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
46. nefla ENSDARG00000057568 62 1.708 - - - - - 0.880 0.828 - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
47. dtnbp1b ENSDARG00000055206 64 1.706 - - - - - 0.753 0.953 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
48. ntng1a ENSDARG00000014973 23 1.692 - - - - - 0.967 0.725 - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
49. si:ch211-202n12.2 ENSDARG00000096665 4 1.681 - - - - 0.725 0.956 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
50. BX571949.1 BX571949.1 293 1.669 - - - - - 0.720 0.949 - -
51. BAALC 250 1.652 - - - - - 0.769 0.883 - - brain and acute leukemia, cytoplasmic
52. TUBB8P7_2 TUBB8P7_2 565 1.638 - - - - - 0.772 0.866 - -
53. pdzd4 175 1.635 - - - - - 0.721 0.914 - - PDZ domain containing 4, transcript variant X2
54. ntrk2a ENSDARG00000059897 185 1.632 - - - - - 0.804 0.828 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
55. CTBP2 CTBP2 19 1.632 0.860 - - - - 0.772 - - -
56. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.631 0.916 - - - - - 0.715 - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
57. BX284638.2 BX284638.2 265 1.628 0.723 - - - - - 0.905 - -
58. FAM175B FAM175B 23 1.619 0.860 - 0.759 - - - - - -
59. mb21d2a mb21d2a 421 1.61 - - - - - 0.719 0.891 - -
60. amigo3 ENSDARG00000074469 39 1.608 - - - - - 0.749 0.859 - - adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
61. WSCD1 ENSDARG00000098113 35 1.605 0.857 - - - - - 0.748 - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
62. lhx1a ENSDARG00000014018 958 1.597 - - - - - 0.707 0.890 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
63. gphnb ENSDARG00000100851 118 1.594 - - - - - 0.886 0.708 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
64. pax6b ENSDARG00000045936 349 1.59 - - - - - 0.748 0.842 - - paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]
65. CABZ01041604.1 ENSDARG00000059854 35 1.585 0.860 - - - 0.725 - - - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
66. im:7162084 im:7162084 665 1.585 0.808 - - - - - 0.777 - -
67. si:dkey-238f9.1 ENSDARG00000079446 51 1.566 - - - - - 0.722 0.844 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
68. GRM8_1 GRM8_1 85 1.551 - - - - - 0.775 0.776 - -
69. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 1.54 - - - - - 0.704 0.836 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
70. zgc:112977 ENSDARG00000071741 109 1.536 0.815 - - - - 0.721 - - - zgc:112977 [Source:ZFIN;Acc:ZDB-GENE-050327-98]
71. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.53 - - - - - 0.829 0.701 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
72. SNAP91 ENSDARG00000098809 556 1.511 0.707 - - - - - 0.804 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
73. fstl5 ENSDARG00000040198 213 1.511 - - - - - 0.741 0.770 - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
74. dachd ENSDARG00000069440 271 1.482 - - - - - 0.717 0.765 - - dachshund d [Source:ZFIN;Acc:ZDB-GENE-070427-2]
75. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 1.481 - - - - - 0.716 0.765 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
76. CU683901.1 CU683901.1 187 1.473 - - - - - 0.702 0.771 - -
77. UBE2QL1 ENSDARG00000079276 3474 1.473 - - - - - 0.752 0.721 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
78. fam49a ENSDARG00000006672 939 1.47 - - - - - 0.721 0.749 - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
79. fam219ab ENSDARG00000013813 591 1.449 - - - - - 0.741 0.708 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
80. APBB3 ENSDARG00000053771 654 1.446 - - - - - 0.724 0.722 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
81. glrbb ENSDARG00000052769, ENSDARG00000113828 467 1.427 - - - - - 0.710 0.717 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
82. si:ch73-68b22.2 ENSDARG00000094609 18 1 - - - - 1.000 - - - - si:ch73-68b22.2 [Source:ZFIN;Acc:ZDB-GENE-091204-355]
83. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - - - - - - 1.000 - -
84. VSTM5 4 1 - - - - - - 1.000 - - V-set and transmembrane domain containing 5
85. styxl1 ENSDARG00000026338 29 1 - - - - - - 1.000 - - serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45]
86. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - - - - - - 1.000 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
87. emilin2a ENSDARG00000061196 57 1 - - - - - - 1.000 - - elastin microfibril interfacer 2a [Source:ZFIN;Acc:ZDB-GENE-060503-247]
88. arl11l arl11l 31 1 - - - - - - 1.000 - -
89. ntrk3b ENSDARG00000086214 1 1 - - - - - - 1.000 - - neurotrophic tyrosine kinase, receptor, type 3b [Source:ZFIN;Acc:ZDB-GENE-010126-4]
90. CRISP3 CRISP3 0 1 - - - - - - 1.000 - -
91. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - - - - - - 1.000 - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
92. c1galt1a ENSDARG00000055585, ENSDARG00000112143 53 1 - - - - - - 1.000 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a [Source:ZFIN;Acc:ZDB-GENE-061013-303]
93. SHANK1_1 SHANK1_1 0 1 - - - - - - 1.000 - -
94. CYP46A1 CYP46A1 16 1 - - - - - - 1.000 - -
95. pgap1 ENSDARG00000062465 30 1 - - - - - - 1.000 - - post-GPI attachment to proteins 1 [Source:ZFIN;Acc:ZDB-GENE-090313-216]
96. CR936540.2 CR936540.2 4 1 - - - - - - 1.000 - -
97. lhx8a ENSDARG00000002330 25 1 - - - - - - 1.000 - - LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
98. SSBP2 ENSDARG00000099727 22 1 - - - - - - 1.000 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
99. slc2a5 ENSDARG00000077875 5 1 - - - - - - 1.000 - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
100. b3gntl1 ENSDARG00000043431 50 1 - - - - - - 1.000 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:ZFIN;Acc:ZDB-GENE-050913-133]

There are 1403 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA