Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slit1a

Gene Name Gene ID Reads Annotation
slit1a ENSDARG00000044954 3810 slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]










Genes with expression patterns similar to slit1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slit1a ENSDARG00000044954 3810 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 slit homolog 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030722-3]
2. scaf11 ENSDARG00000045885 3531 1.859 - - - - - - - 0.925 0.934 SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
3. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.839 - - - - - - - 0.903 0.936
4. atp6v1f ENSDARG00000045543 3445 1.805 - - - - - - - 0.851 0.954 ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
5. cpla2 cpla2 1031 1.788 - - - - - - - 0.853 0.935
6. exoc3 ENSDARG00000014582, ENSDARG00000114378, ENSDARG00000117037 1155 1.779 - 0.848 - - - - - - 0.931 exocyst complex component 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5947]
7. pou2f1b ENSDARG00000007996 2172 1.778 - 0.844 - - - - - - 0.934 POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
8. srebf2 ENSDARG00000063438 1982 1.764 - - - - - - - 0.883 0.881 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
9. lepre1 lepre1 5346 1.764 - - - - - - - 0.870 0.894
10. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.753 - 0.843 - - - - - 0.910 - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
11. prelid1b ENSDARG00000044169 501 1.732 - 0.836 - - - - - 0.896 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
12. usp1 ENSDARG00000056414 1816 1.721 - 0.836 - - - - - 0.885 - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
13. eprs ENSDARG00000060494 4729 1.72 - 0.773 - - - - - - 0.947 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
14. slc30a9 ENSDARG00000057272 766 1.715 - 0.808 - - - - - 0.907 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
15. cxcr4b ENSDARG00000041959 2322 1.701 - - - - - 0.761 - - 0.940 chemokine (C-X-C motif), receptor 4b [Source:ZFIN;Acc:ZDB-GENE-010614-1]
16. pcnp ENSDARG00000037713 2754 1.7 - 0.794 - - - - - 0.906 - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
17. coro7 ENSDARG00000089616 2141 1.696 - 0.816 - - - - - 0.880 - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
18. ndst2a ENSDARG00000086269 754 1.693 - 0.753 - - - - - - 0.940 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
19. zgc:56095 ENSDARG00000018461 3360 1.691 - 0.835 - - - - - 0.856 - zgc:56095 [Source:ZFIN;Acc:ZDB-GENE-040426-1948]
20. slc1a5 ENSDARG00000099186 7580 1.681 - - - - - - - 0.848 0.833 solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
21. wnt4a ENSDARG00000071208 1157 1.681 - - - - - 0.867 0.814 - - wingless-type MMTV integration site family, member 4a [Source:ZFIN;Acc:ZDB-GENE-980526-352]
22. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.676 - 0.736 - - - - - - 0.940 RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
23. hint2 ENSDARG00000100938 1053 1.675 - 0.740 - - - - - - 0.935 histidine triad nucleotide binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070410-139]
24. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 1.669 - 0.726 - - - - - - 0.943 RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
25. apc ENSDARG00000058868 2605 1.665 - - - - - 0.742 - - 0.923 adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
26. cpsf3 ENSDARG00000027649 6897 1.664 - - - - - - - 0.792 0.872 cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
27. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 1.664 - 0.760 - - - - - 0.904 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
28. rcor2 ENSDARG00000008278 1678 1.664 - - - - - - 0.725 - 0.939 REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
29. gorasp2 ENSDARG00000015126 3923 1.655 - 0.803 - - - - - - 0.852 golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
30. zgc:113531 ENSDARG00000038794 2063 1.642 - - - - - 0.853 0.789 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
31. aldh7a1 ENSDARG00000018426 4637 1.629 - 0.748 - - - - - 0.881 - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
32. rcn3 ENSDARG00000037961, ENSDARG00000110075 1544 1.622 - 0.759 - - - - - - 0.863 reticulocalbin 3, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-040625-175]
33. pcyt2 ENSDARG00000043003 3506 1.62 - - - - - 0.719 - 0.901 - phosphate cytidylyltransferase 2, ethanolamine [Source:ZFIN;Acc:ZDB-GENE-041010-132]
34. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.618 - - - - - - 0.737 0.881 - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
35. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.606 - 0.758 - - - - - 0.848 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
36. spon1a ENSDARG00000010029 355 1.604 - - - - - 0.765 0.839 - - spondin 1a [Source:ZFIN;Acc:ZDB-GENE-000427-9]
37. p4ha2 ENSDARG00000010085 2008 1.602 0.707 - - - - - - - 0.895 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030827-1]
38. nr2f6b ENSDARG00000003165 5855 1.601 - - - - - - 0.755 0.846 - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
39. st8sia2 ENSDARG00000018788 2183 1.6 - - - - - 0.708 - 0.892 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
40. kmt2e ENSDARG00000007523 1851 1.594 - 0.856 - - - - 0.738 - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
41. si:ch73-265d7.2 ENSDARG00000116713 2142 1.591 - - - - - 0.795 0.796 - - si:ch73-265d7.2 [Source:ZFIN;Acc:ZDB-GENE-100922-146]
42. pkd2l1 ENSDARG00000022503 372 1.583 - - - - - 0.811 0.772 - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
43. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 1.575 - - - - - 0.787 0.788 - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
44. cyr61l2 ENSDARG00000099985 725 1.573 - - - - - 0.725 0.848 - - cysteine-rich, angiogenic inducer, 61 like 2 [Source:ZFIN;Acc:ZDB-GENE-060404-5]
45. slit2 ENSDARG00000004246 5277 1.572 - - - - - 0.768 0.804 - - slit homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-3]
46. cdkl1 ENSDARG00000017329 3345 1.569 - - - - - 0.765 0.804 - - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
47. FP016176.1 FP016176.1 7030 1.567 - - - - - 0.783 0.784 - -
48. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 1.562 - 0.741 - - - - - 0.821 - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
49. cog7 ENSDARG00000061372 789 1.56 - 0.776 - - - - 0.784 - - component of oligomeric golgi complex 7 [Source:ZFIN;Acc:ZDB-GENE-061013-463]
50. wnt4b ENSDARG00000040159, ENSDARG00000115606 490 1.56 - - - - - 0.812 0.748 - - wingless-type MMTV integration site family, member 4b [Source:ZFIN;Acc:ZDB-GENE-000411-1]
51. nkx2.2b ENSDARG00000101549 266 1.559 - - - - - 0.741 0.818 - - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
52. serpinh1a ENSDARG00000075954 6488 1.559 - - - - - - - 0.821 0.738 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
53. snrpe ENSDARG00000033175 7462 1.558 - - - - - 0.725 - - 0.833 small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
54. clstn2 ENSDARG00000060637 548 1.557 - - - - - 0.773 0.784 - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
55. clic1 ENSDARG00000103340 2235 1.549 - 0.721 - - - - - 0.828 - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
56. gria2b ENSDARG00000052765 188 1.548 - - - - - 0.767 0.781 - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
57. vim ENSDARG00000010008 3551 1.548 - - - - - 0.749 0.799 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
58. CU928222.1 ENSDARG00000097436 1662 1.546 - - - - - 0.834 0.712 - -
59. efnb3b ENSDARG00000042277 5823 1.543 - - - - - 0.731 - 0.812 - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
60. ptenb ENSDARG00000056623 5783 1.539 - - - - - - 0.730 - 0.809 phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
61. wipi1 ENSDARG00000040657 2732 1.536 - 0.723 - - - - - - 0.813 WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
62. zic5 ENSDARG00000016022 1034 1.533 - 0.765 - - - - 0.768 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
63. gpr98 gpr98 717 1.53 - - - - - 0.746 0.784 - -
64. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.529 - - - - - - 0.713 - 0.816 patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
65. isl1 ENSDARG00000004023 981 1.528 - - - - - 0.792 0.736 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
66. CU915738.1 CU915738.1 3723 1.527 - - - - - - - 0.732 0.795
67. mnx2a ENSDARG00000042106 939 1.519 - - - - - 0.790 0.729 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
68. nkx2.2a ENSDARG00000053298 747 1.519 - - - - - 0.727 0.792 - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
69. pkd1b ENSDARG00000033029 461 1.517 - - - - - 0.768 0.749 - - polycystic kidney disease 1b [Source:ZFIN;Acc:ZDB-GENE-100707-2]
70. CABZ01081490.1 ENSDARG00000111653 11892 1.512 - - - - - - - 0.773 0.739
71. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.511 - - - - - 0.776 0.735 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
72. scg2a 800 1.505 - - - - - 0.757 0.748 - - secretogranin II (chromogranin C) a
73. robo3 ENSDARG00000005645 2818 1.505 - 0.713 - - - - 0.792 - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
74. C18H16orf70 C18H16orf70 542 1.504 0.737 0.767 - - - - - - -
75. CABZ01088330.1 CABZ01088330.1 679 1.502 - - - - - 0.748 0.754 - -
76. tmtc2 tmtc2 798 1.496 - - - - - 0.702 0.794 - -
77. spon1b ENSDARG00000023694, ENSDARG00000110889 586 1.496 - - - - - 0.702 0.794 - - spondin 1b [Source:ZFIN;Acc:ZDB-GENE-000427-10]
78. arid1aa ENSDARG00000101710 3644 1.491 - 0.769 - - - 0.722 - - - AT rich interactive domain 1Aa (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-080220-35]
79. uba1 ENSDARG00000037559 11579 1.486 - 0.718 - - - 0.768 - - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
80. nkx6.1 ENSDARG00000022569 3779 1.485 - - - - - 0.726 0.759 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
81. IM:7163548 IM:7163548 6540 1.466 - - - - - 0.731 0.735 - -
82. zic2a ENSDARG00000015554 2860 1.465 - - - - - - 0.730 0.735 - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
83. ANKRD11 ENSDARG00000051886 10024 1.465 - - - - - 0.715 0.750 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
84. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.46 - - - - - 0.749 0.711 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
85. ptprna ENSDARG00000058646 1327 1.457 - - - - - 0.734 0.723 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
86. hmgb3a ENSDARG00000056725 15668 1.447 - - - - - 0.712 0.735 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
87. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.445 - - - - - 0.730 0.715 - - netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
88. smarcd1 ENSDARG00000019004 6028 1.441 - - - - - 0.737 0.704 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
89. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.439 - - - - - 0.715 0.724 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
90. tmem47 ENSDARG00000057322 4691 1.426 - - - - - 0.708 0.718 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
91. ret ENSDARG00000055305 700 1.423 - - - - - 0.710 0.713 - - ret proto-oncogene receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-980526-307]
92. cmip ENSDARG00000062933 4521 0.959 - - - - - - - - 0.959 c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
93. atf6 ENSDARG00000012656 3873 0.957 - - - - - - - - 0.957 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
94. lman2 ENSDARG00000061854 6251 0.954 - - - - - - - - 0.954 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
95. cbl ENSDARG00000009958 1321 0.953 - - - - - - - - 0.953 Cbl proto-oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041114-207]
96. KANSL1_1 KANSL1_1 1809 0.953 - - - - - - - - 0.953
97. TRIO TRIO 1601 0.953 - - - - - - - - 0.953
98. dpp3 ENSDARG00000020676 2393 0.952 - - - - - - - - 0.952 dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
99. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.951 - - - - - - - - 0.951 spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
100. necap2 ENSDARG00000046002 4372 0.951 - - - - - - - - 0.951 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]

There are 1221 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA