Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc8a3

Gene Name Gene ID Reads Annotation
slc8a3 ENSDARG00000004931 338 solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]










Genes with expression patterns similar to slc8a3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc8a3 ENSDARG00000004931 338 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
2. znf106a ENSDARG00000016651 6049 2.412 0.845 0.758 - - - - 0.809 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
3. CU633479.5 ENSDARG00000114818 1815 2.409 0.822 0.833 - - - - 0.754 - -
4. xirp2a ENSDARG00000071113 7113 2.399 0.863 0.711 - - - - 0.825 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
5. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 2.393 0.841 - - - - 0.815 0.737 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
6. limch1a ENSDARG00000074275 2981 2.389 0.928 0.739 - - - - 0.722 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
7. trdn ENSDARG00000041779 4283 2.377 0.861 0.710 - - - - 0.806 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
8. MYOT ENSDARG00000076312 1791 2.376 0.823 0.823 - - - - 0.730 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
9. hapln1a ENSDARG00000089769 12334 2.368 0.809 0.817 - - - - 0.742 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
10. C13H10orf71 3489 2.364 0.768 0.839 - - - - 0.757 - - chromosome 13 C10orf71 homolog
11. ITGB1BP2 ENSDARG00000030176 2472 2.347 0.832 0.745 - - - - 0.770 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
12. srl ENSDARG00000104587 11126 2.342 0.806 0.729 - - - - 0.807 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
13. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.33 0.786 0.753 - - - - 0.791 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
14. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 2.33 0.776 - - - - - 0.758 0.796 - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
15. chrna1 ENSDARG00000009021 2931 2.304 0.821 0.765 - - - - 0.718 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
16. pygma ENSDARG00000055518 15972 2.29 0.829 0.712 - - - - 0.749 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
17. alpk3a ENSDARG00000078989 1992 2.289 0.743 0.750 - - - - - 0.796 - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
18. gypc ENSDARG00000041546 1487 2.285 0.778 0.714 - - - - 0.793 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
19. trim55a ENSDARG00000029596 2858 2.281 0.801 0.710 - - - - 0.770 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
20. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 2.264 - 0.757 - - - 0.721 0.786 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
21. klhl40a ENSDARG00000039052 2537 2.256 0.736 0.747 - - - - 0.773 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
22. vwde ENSDARG00000103443 5758 2.255 0.779 0.734 - - - - 0.742 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
23. hhatla ENSDARG00000039051 6598 2.254 0.745 0.724 - - - - 0.785 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
24. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.25 0.761 0.782 - - - - 0.707 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
25. MYOM1 MYOM1 3870 2.235 0.719 0.811 - - - - 0.705 - -
26. fitm1 ENSDARG00000056464 1759 2.224 0.766 0.735 - - - - 0.723 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
27. NRAP ENSDARG00000009341 3565 2.222 0.707 0.706 - - - - 0.809 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
28. ablim2 ENSDARG00000055223 1934 2.22 0.703 - - - - 0.758 0.759 - - actin binding LIM protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-100316-5]
29. CABZ01086825.1 CABZ01086825.1 573 2.217 0.734 0.703 - - - - 0.780 - -
30. BX294434.1 ENSDARG00000061272 6493 2.212 0.738 0.716 - - - - 0.758 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
31. sptb ENSDARG00000030490 7128 2.2 0.726 0.705 - - - - 0.769 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
32. MUSTN1 MUSTN1 1882 2.192 - 0.710 - - - 0.745 0.737 - -
33. ube2d4 ENSDARG00000015057 1089 1.796 0.915 - - - - - 0.881 - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
34. BX530018.3 ENSDARG00000107022 614 1.731 0.882 - - - - - 0.849 - -
35. cyp1d1 ENSDARG00000035569 628 1.716 - - - - - - 0.875 0.841 - cytochrome P450, family 1, subfamily D, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041114-179]
36. CR354540.2 ENSDARG00000117517 18452 1.702 0.928 - - - - - 0.774 - -
37. MYOM3 2720 1.701 0.795 0.906 - - - - - - - myomesin 3, transcript variant X2
38. FRMD5 ENSDARG00000075942 569 1.686 - 0.842 - - - - 0.844 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
39. PTPLA PTPLA 4044 1.677 0.867 - - - - - 0.810 - -
40. myhz2 ENSDARG00000012944 69921 1.672 0.873 - - - - - 0.799 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
41. smtnl1 ENSDARG00000041257 7410 1.67 0.889 - - - - - 0.781 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
42. PXN PXN 395 1.669 0.811 0.858 - - - - - - -
43. fxr1 ENSDARG00000022968 2831 1.664 0.787 - - - - - 0.877 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
44. BX324201.1 BX324201.1 3302 1.663 0.827 - - - - - 0.836 - -
45. tgm2a ENSDARG00000070157 4516 1.657 0.890 - - - - - 0.767 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
46. plecb ENSDARG00000021987 13621 1.65 0.859 0.791 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
47. akap6 ENSDARG00000077295 1382 1.649 0.856 - - - - - 0.793 - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
48. grem2 grem2 743 1.649 0.838 0.811 - - - - - - -
49. rtn2a ENSDARG00000016088 12184 1.646 0.824 - - - - - 0.822 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
50. arpp21 ENSDARG00000061081 892 1.645 0.842 0.803 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
51. asb2a asb2a 845 1.643 - 0.839 - - - - 0.804 - -
52. CABZ01080590.2 CABZ01080590.2 2038 1.642 0.796 - - - - - 0.846 - -
53. cacna2d1a ENSDARG00000014804 1924 1.638 0.783 - - - - - 0.855 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
54. smpx ENSDARG00000045302 2175 1.638 0.817 - - - - - 0.821 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
55. six1b ENSDARG00000026473 1908 1.637 - 0.915 - - - - 0.722 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
56. nexn ENSDARG00000057317 10972 1.637 0.894 - - - - - 0.743 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
57. cap2 ENSDARG00000104478 3266 1.627 0.784 - - - - - 0.843 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
58. NAT16 ENSDARG00000086222 4682 1.624 0.824 - - - - - 0.800 - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
59. atp1b3b ENSDARG00000042837 5163 1.624 0.818 - - - - - 0.806 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
60. myod1 ENSDARG00000030110 6019 1.624 0.835 - - - - - 0.789 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
61. hfe2 4113 1.618 0.784 0.834 - - - - - - - hemochromatosis type 2
62. myhc4 ENSDARG00000035438 1322 1.618 0.767 - - - - - 0.851 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
63. mkln1 ENSDARG00000025576 1122 1.612 - 0.831 - - - - - 0.781 - muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
64. LIMD1_1 LIMD1_1 348 1.611 0.787 - - - - - 0.824 - -
65. adss ENSDARG00000002071 5497 1.611 0.844 - - - - - 0.767 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
66. lama2 ENSDARG00000099390 24734 1.608 0.839 - - - - - 0.769 - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
67. si:ch211-156j16.1 ENSDARG00000092035 7441 1.608 0.815 - - - - - 0.793 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
68. unc45b ENSDARG00000008433 8298 1.602 0.793 - - - - - 0.809 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
69. cacng1 cacng1 3118 1.602 0.735 0.867 - - - - - - -
70. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.602 - 0.787 - - - - 0.815 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
71. sh3bgr ENSDARG00000021633 3498 1.594 0.828 - - - - - 0.766 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
72. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.594 0.857 - - - - - 0.737 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
73. mir133b_1 671 1.586 0.775 - - - - - 0.811 - - microRNA 133b
74. tnc ENSDARG00000021948, ENSDARG00000113518 12162 1.584 0.870 0.714 - - - - - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
75. pvalb7 ENSDARG00000034705, ENSDARG00000109277 221 1.582 - - - - - - 0.792 0.790 - parvalbumin 7 [Source:ZFIN;Acc:ZDB-GENE-040718-285]
76. tgfbi ENSDARG00000071586 17779 1.582 0.854 - - - - - 0.728 - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
77. sar1ab ENSDARG00000033320 3984 1.581 0.805 - - - - - 0.776 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
78. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 1.58 0.738 - - - - - 0.842 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
79. hspb7 ENSDARG00000104441 1417 1.58 0.725 0.855 - - - - - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
80. plxnb1a ENSDARG00000075821 1702 1.579 0.819 - - - - - 0.760 - - plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]
81. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.578 0.717 - - - - - 0.861 - -
82. fbxl22 ENSDARG00000096995 1290 1.577 - 0.803 - - - - 0.774 - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
83. spata4 ENSDARG00000036189, ENSDARG00000114468 118 1.574 - 0.789 - - - - 0.785 - - spermatogenesis associated 4 [Source:ZFIN;Acc:ZDB-GENE-050417-153]
84. alpk2 ENSDARG00000079637 1483 1.574 0.828 - - - - - 0.746 - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
85. SPEG SPEG 4017 1.571 0.765 - - - - - 0.806 - -
86. prx ENSDARG00000017246 6183 1.57 0.783 - - - - - 0.787 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
87. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.568 0.814 - - - - - 0.754 - -
88. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.565 - 0.829 - - - - 0.736 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
89. myoz2a ENSDARG00000012311 1373 1.563 - 0.862 - - - 0.701 - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
90. smyd1b ENSDARG00000091253 4964 1.563 0.834 0.729 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
91. ryr1b ENSDARG00000023797 5693 1.562 - 0.784 - - - - 0.778 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
92. lrrfip1a ENSDARG00000030012 1263 1.562 - 0.851 - - - 0.711 - - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
93. BX001033.2 BX001033.2 857 1.561 0.770 0.791 - - - - - - -
94. pam16 ENSDARG00000102822 860 1.558 0.776 0.782 - - - - - - - presequence translocase associated motor 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1776]
95. jph2 ENSDARG00000028625 6706 1.557 0.789 - - - - - 0.768 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
96. pi15a ENSDARG00000045378 2361 1.552 0.822 - - - - - 0.730 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
97. USP15 958 1.552 - 0.730 - - - 0.822 - - - ubiquitin specific peptidase 15
98. ppapdc3 ppapdc3 4924 1.551 0.745 - - - - - 0.806 - -
99. sox6 ENSDARG00000015536 7728 1.549 0.805 - - - - - 0.744 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
100. ryr3 ENSDARG00000071331 6795 1.547 0.766 - - - - - 0.781 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]

There are 1060 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA