Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc6a9

Gene Name Gene ID Reads Annotation
slc6a9 ENSDARG00000018534 4089 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:ZFIN;Acc:ZDB-GENE-050105-3]










Genes with expression patterns similar to slc6a9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc6a9 ENSDARG00000018534 4089 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:ZFIN;Acc:ZDB-GENE-050105-3]
2. BX294434.1 ENSDARG00000061272 6493 2.548 0.800 0.793 - - - 0.955 - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
3. tmsb ENSDARG00000054911 6411 2.444 0.878 0.725 - - - - 0.841 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
4. wu:fb17g07 wu:fb17g07 10567 2.302 0.855 0.738 - - - - 0.709 - -
5. actn3b ENSDARG00000001431 15747 2.289 0.706 0.742 - - - 0.841 - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
6. CR388002.1 CR388002.1 1998 2.259 0.719 0.731 - - - - 0.809 - -
7. gstm gstm 4064 2.221 0.702 0.791 - - - - 0.728 - -
8. prx ENSDARG00000017246 6183 2.213 0.802 0.706 0.705 - - - - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
9. zgc:153662 zgc:153662 4604 1.748 0.767 - - - - 0.981 - - -
10. pebp1 ENSDARG00000042069 6651 1.726 0.890 - - - - - 0.836 - - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
11. PHB2 PHB2 3755 1.715 - 0.730 - - - 0.985 - - -
12. fmr1 ENSDARG00000037433 5132 1.702 0.714 - - - - 0.988 - - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
13. slc1a3a ENSDARG00000104431 9888 1.646 0.778 - - - - - 0.868 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
14. tle2 5014 1.641 0.740 - - - - - 0.901 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
15. marcksl1b ENSDARG00000035715 37390 1.64 0.820 - - - - 0.820 - - - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
16. greb1l ENSDARG00000039196 2085 1.636 - 0.829 - - - - 0.807 - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
17. si:ch211-151o1.2 si:ch211-151o1.2 3580 1.627 0.865 - - - - - 0.762 - -
18. cldn5a ENSDARG00000043716 3865 1.619 0.748 - - - - - 0.871 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
19. NAT16 ENSDARG00000086222 4682 1.614 0.780 - - - - - 0.834 - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
20. si:dkey-25e11.10 si:dkey-25e11.10 955 1.607 0.737 - - - - - 0.870 - -
21. cdkn1c cdkn1c 17427 1.607 0.767 - - - - - 0.840 - -
22. plagx ENSDARG00000036855 3768 1.6 0.764 - - - - - 0.836 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
23. hmgb3a ENSDARG00000056725 15668 1.597 0.758 - - - - - 0.839 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
24. serinc1 ENSDARG00000009106 10571 1.595 - - - - - 0.872 0.723 - - serine incorporator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4415]
25. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.593 0.786 - - - - - 0.807 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
26. lsm6 ENSDARG00000036995 4377 1.588 0.834 - - - - - 0.754 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
27. tmpob ENSDARG00000022978 8121 1.586 0.712 - - - - - 0.874 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
28. mdh1b ENSDARG00000018008 3196 1.584 0.728 0.856 - - - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
29. ank1 ank1 5209 1.582 0.753 0.829 - - - - - - -
30. enpp1 ENSDARG00000005789 3267 1.581 0.778 0.803 - - - - - - - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
31. zic2a ENSDARG00000015554 2860 1.581 0.706 - - - - - 0.875 - - zic family member 2 (odd-paired homolog, Drosophila), a [Source:ZFIN;Acc:ZDB-GENE-000710-4]
32. PSIP1 PSIP1 5252 1.58 0.764 - - - - - 0.816 - -
33. hoxa3a ENSDARG00000103862 2239 1.578 0.733 - - - - - 0.845 - - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
34. nrn1a ENSDARG00000071860 1311 1.574 0.797 - - - - - 0.777 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
35. pfn2l ENSDARG00000012682 21690 1.566 0.775 - - - - - 0.791 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
36. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.564 0.743 - - - - - 0.821 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
37. her9 ENSDARG00000056438, ENSDARG00000115775 3099 1.563 0.857 - - - - 0.706 - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
38. cap2 ENSDARG00000104478 3266 1.562 0.838 0.724 - - - - - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
39. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 1.552 - 0.726 - - - - 0.826 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
40. ube2d4 ENSDARG00000015057 1089 1.551 - 0.757 - - - - 0.794 - - ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
41. tprg1l ENSDARG00000068149 1605 1.543 0.735 - - - - - 0.808 - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
42. vim ENSDARG00000010008 3551 1.543 - 0.715 - - - - 0.828 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
43. pygmb ENSDARG00000013317 5454 1.537 - 0.785 - - - - 0.752 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
44. rtn2a ENSDARG00000016088 12184 1.536 0.825 - 0.711 - - - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
45. uba1 ENSDARG00000037559 11579 1.53 0.730 - - - - - 0.800 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
46. dtnbb ENSDARG00000013020 280 1.528 0.818 - - - - - 0.710 - - dystrobrevin, beta b [Source:ZFIN;Acc:ZDB-GENE-070117-3]
47. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.528 0.707 - - - - - 0.821 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
48. syncripl ENSDARG00000026723 3889 1.527 - 0.778 - - - - 0.749 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
49. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.526 0.741 - - - - - 0.785 - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
50. zic4 ENSDARG00000031307 1228 1.526 0.701 - - - - - 0.825 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
51. ctnnd2b ENSDARG00000003779 964 1.525 - 0.715 - - - - 0.810 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
52. CABZ01070258.1 ENSDARG00000105687 3643 1.525 - - - - - 0.711 0.814 - -
53. pcdh1gc5 ENSDARG00000104826 10052 1.523 0.702 - - - - - 0.821 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
54. camk2d2 ENSDARG00000014273 2840 1.521 0.794 - - - - - 0.727 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
55. pax3a ENSDARG00000010192 626 1.52 - 0.722 - - - - 0.798 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
56. srl ENSDARG00000104587 11126 1.52 0.721 0.799 - - - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
57. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.518 0.762 0.756 - - - - - - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
58. cd99l2 ENSDARG00000056722 5036 1.518 0.736 - - - - - 0.782 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
59. cacng1 cacng1 3118 1.506 0.705 0.801 - - - - - - -
60. anp32e ENSDARG00000054804 11017 1.501 - 0.781 - - - - 0.720 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
61. hapln1a ENSDARG00000089769 12334 1.501 - 0.785 - - - - 0.716 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
62. tmem242 ENSDARG00000037070 1081 1.497 0.734 0.763 - - - - - - - transmembrane protein 242 [Source:ZFIN;Acc:ZDB-GENE-040724-146]
63. MYPN 404 1.496 - 0.742 - - - - 0.754 - - myopalladin, transcript variant X1
64. klhl41a ENSDARG00000068888 1034 1.495 0.703 0.792 - - - - - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
65. CCK CCK 1826 1.489 0.767 - - - - - 0.722 - -
66. plecb ENSDARG00000021987 13621 1.486 0.707 0.779 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
67. C13H10orf71 3489 1.485 0.701 0.784 - - - - - - - chromosome 13 C10orf71 homolog
68. MSS51 ENSDARG00000075463 428 1.483 0.726 0.757 - - - - - - - MSS51 mitochondrial translational activator [Source:ZFIN;Acc:ZDB-GENE-130530-775]
69. rusc1 ENSDARG00000078125 617 1.482 0.728 - - - - - 0.754 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
70. efemp2a ENSDARG00000094324 39261 1.481 0.777 - - - - 0.704 - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
71. ppm1la ENSDARG00000063218 2142 1.48 - 0.774 - - - - 0.706 - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
72. smyd1b ENSDARG00000091253 4964 1.478 0.762 0.716 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
73. arvcfb ENSDARG00000061688 2388 1.477 0.702 - - - - - 0.775 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
74. clvs2 ENSDARG00000053122 1390 1.476 - - - - - 0.710 0.766 - - clavesin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-313]
75. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.475 0.749 0.726 - - - - - - -
76. chrna1 ENSDARG00000009021 2931 1.474 0.701 0.773 - - - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
77. stip1 ENSDARG00000004906 7742 1.47 0.740 - - - - - 0.730 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
78. sptb ENSDARG00000030490 7128 1.469 0.737 0.732 - - - - - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
79. FHOD3_1 FHOD3_1 983 1.469 0.740 0.729 - - - - - - -
80. abcf1 ENSDARG00000031795 8635 1.468 0.707 - - - - - 0.761 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
81. cmya5 ENSDARG00000061379 1423 1.467 0.714 0.753 - - - - - - - cardiomyopathy associated 5 [Source:ZFIN;Acc:ZDB-GENE-070630-1]
82. txlnbb ENSDARG00000076241 6396 1.467 0.749 0.718 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
83. BX255936.1 BX255936.1 327 1.467 - 0.714 - - - - 0.753 - -
84. cct5 ENSDARG00000045399 11572 1.465 0.753 0.712 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
85. C12H10orf71 C12H10orf71 595 1.463 - 0.721 - - - - 0.742 - -
86. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 1.461 0.715 - - - - - 0.746 - - homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
87. hn1b hn1b 7325 1.459 0.735 - - - - - 0.724 - -
88. six1b ENSDARG00000026473 1908 1.448 0.703 0.745 - - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
89. tnnt3a ENSDARG00000030270 112506 1.446 0.725 - 0.721 - - - - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
90. ELOVL4 ELOVL4 3026 1.445 0.715 - - - - - 0.730 - -
91. st8sia5 ENSDARG00000036584 529 1.442 0.734 - - - - - 0.708 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
92. ryr3 ENSDARG00000071331 6795 1.441 - 0.738 - - - - 0.703 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
93. znf106a ENSDARG00000016651 6049 1.44 0.723 0.717 - - - - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
94. gypc ENSDARG00000041546 1487 1.439 0.712 0.727 - - - - - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
95. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 1.437 0.717 - - - - 0.720 - - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
96. usp36 ENSDARG00000032327 1884 1.435 - 0.735 - - - 0.700 - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
97. ssbp1 ENSDARG00000039350 809 1.433 0.716 0.717 - - - - - - - single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]
98. rhoq ENSDARG00000025953 674 1.431 0.722 0.709 - - - - - - - ras homolog family member Q [Source:ZFIN;Acc:ZDB-GENE-030131-5721]
99. si:ch211-138k19.2 si:ch211-138k19.2 398 1.431 - - - - - 0.709 0.722 - -
100. trim55a ENSDARG00000029596 2858 1.431 0.722 0.709 - - - - - - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]

There are 1383 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA