Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc6a4a

Gene Name Gene ID Reads Annotation
slc6a4a ENSDARG00000061165 206 solute carrier family 6 (neurotransmitter transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060314-1]










Genes with expression patterns similar to slc6a4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc6a4a ENSDARG00000061165 206 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 6 (neurotransmitter transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-060314-1]
2. tgfb1b ENSDARG00000034895 608 1.735 0.923 - - - 0.812 - - - - transforming growth factor, beta 1b [Source:ZFIN;Acc:ZDB-GENE-091028-1]
3. wdr90 ENSDARG00000079241 1163 1.673 0.932 - - - - 0.741 - - - WD repeat domain 90 [Source:ZFIN;Acc:ZDB-GENE-070424-67]
4. spsb3a ENSDARG00000077737 527 1.65 - - - - - - 0.783 0.867 - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
5. rpp40 ENSDARG00000017605 63 1.632 - 0.885 - - - - 0.747 - - ribonuclease P/MRP 40 subunit [Source:ZFIN;Acc:ZDB-GENE-040625-161]
6. sc:d0413 sc:d0413 121 1.62 0.785 - - - - - - 0.835 -
7. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.61 - - - - - - 0.774 0.836 - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
8. fastkd1 ENSDARG00000056128 141 1.608 - - - - - - 0.756 0.852 - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
9. ctgfb ENSDARG00000104292 69 1.607 - - - - - - 0.799 0.808 - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
10. SIPA1L3 ENSDARG00000061699 268 1.588 - 0.713 - - - - 0.875 - - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
11. TMEM255A ENSDARG00000073911 924 1.561 - 0.792 - - 0.769 - - - - transmembrane protein 255A [Source:ZFIN;Acc:ZDB-GENE-070412-2]
12. wdtc1 ENSDARG00000059760 1218 1.557 - - - - 0.785 0.772 - - - WD and tetratricopeptide repeats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3224]
13. CABZ01044023.1 ENSDARG00000117734 240 1.555 - - - - - 0.784 0.771 - -
14. CU638737.1 CU638737.1 17 1.545 0.796 0.749 - - - - - - -
15. si:ch211-259i2.2 si:ch211-259i2.2 45 1.525 - - - - - - 0.821 0.704 -
16. CABZ01024770.1 CABZ01024770.1 150 1.522 - - - - - 0.798 0.724 - -
17. rfc5 ENSDARG00000035634 974 1.514 - - - - - 0.761 0.753 - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
18. C14H4orf29 C14H4orf29 155 1.5 0.733 0.767 - - - - - - -
19. zgc:77816 zgc:77816 800 1.485 - - - - - - 0.727 0.758 -
20. CABZ01064973.1 CABZ01064973.1 160 1.477 0.731 - - - - - - 0.746 -
21. pex7 ENSDARG00000042553 409 1.472 - - - - - - 0.760 0.712 - peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
22. CAPN1_1 ENSDARG00000055338 288 1.471 0.725 - - - - 0.746 - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
23. tmem110 497 1.468 - - - - - 0.715 0.753 - - transmembrane protein 110
24. nck2a ENSDARG00000018206 231 1.468 - 0.740 - - - - - 0.728 - NCK adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-686]
25. cenpi ENSDARG00000052565 482 1.467 - - - - - - 0.749 0.718 - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
26. cdc37l1 ENSDARG00000044265 360 1.459 0.735 0.724 - - - - - - - cell division cycle 37-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8865]
27. muc13a ENSDARG00000069559 985 1.458 0.705 - - - - - 0.753 - - mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
28. efcab4a efcab4a 110 1.447 - - - - - 0.703 0.744 - -
29. si:ch1073-185p12.2 ENSDARG00000100199 7 0.953 0.953 - - - - - - - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
30. si:dkey-222o15.5 si:dkey-222o15.5 27 0.953 0.953 - - - - - - - -
31. mfng ENSDARG00000042925 104 0.953 0.953 - - - - - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
32. gpr182 ENSDARG00000036616 455 0.947 0.947 - - - - - - - - G protein-coupled receptor 182 [Source:ZFIN;Acc:ZDB-GENE-030131-2361]
33. CU463790.1 CU463790.1 60 0.943 - 0.943 - - - - - - -
34. mrc1a ENSDARG00000102100 1260 0.942 0.942 - - - - - - - - mannose receptor, C type 1a [Source:ZFIN;Acc:ZDB-GENE-090915-4]
35. ccdc127b ENSDARG00000008946 141 0.934 - - - - - - 0.934 - - coiled-coil domain containing 127b [Source:ZFIN;Acc:ZDB-GENE-060503-656]
36. greb1l_1 ENSDARG00000039196 8 0.932 - 0.932 - - - - - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
37. prom2 ENSDARG00000039406 278 0.925 - - - - - - 0.925 - - prominin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-16]
38. clybl ENSDARG00000029729 690 0.922 - 0.922 - - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
39. fam46a fam46a 92 0.92 0.920 - - - - - - - -
40. gadd45aa ENSDARG00000043581 114 0.913 - - - - - - 0.913 - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
41. prcp ENSDARG00000037883 473 0.913 0.913 - - - - - - - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
42. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 0.91 - - - - - - 0.910 - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
43. TSHZ3 TSHZ3 369 0.907 - 0.907 - - - - - - -
44. elac1 ENSDARG00000045095, ENSDARG00000117014 244 0.906 0.906 - - - - - - - - elaC ribonuclease Z 1 [Source:ZFIN;Acc:ZDB-GENE-040801-246]
45. FAT4 ENSDARG00000105285 11 0.901 0.901 - - - - - - - - FAT atypical cadherin 4 [Source:HGNC Symbol;Acc:HGNC:23109]
46. zgc:162235 zgc:162235 9 0.901 0.901 - - - - - - - -
47. SLC2A4RG SLC2A4RG 47 0.901 0.901 - - - - - - - -
48. RAB35 RAB35 4 0.901 0.901 - - - - - - - -
49. slc13a2 ENSDARG00000053853 1164 0.901 0.901 - - - - - - - - solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2389]
50. zgc:174708 zgc:174708 11 0.901 0.901 - - - - - - - -
51. si:ch211-162i8.6 si:ch211-162i8.6 15 0.901 0.901 - - - - - - - -
52. si:ch73-338a16.3 ENSDARG00000101159 18 0.901 0.901 - - - - - - - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
53. CABZ01084613.1 CABZ01084613.1 22 0.901 0.901 - - - - - - - -
54. ctssa ctssa 24 0.901 0.901 - - - - - - - -
55. abcb10 ENSDARG00000061591 253 0.898 - - - - - - 0.898 - - ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Source:ZFIN;Acc:ZDB-GENE-040525-2]
56. PEG3_22 PEG3_22 33 0.897 0.897 - - - - - - - -
57. tbx6 ENSDARG00000011785 132 0.897 0.897 - - - - - - - - T-box 6 [Source:ZFIN;Acc:ZDB-GENE-020416-5]
58. gpd1c ENSDARG00000036942 869 0.894 - - - - - - 0.894 - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
59. mlh1 ENSDARG00000025948 130 0.894 - 0.894 - - - - - - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
60. wu:fb11h05 wu:fb11h05 126 0.894 - 0.894 - - - - - - -
61. tie1 ENSDARG00000004105 400 0.893 0.893 - - - - - - - - tyrosine kinase with immunoglobulin-like and EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-990415-55]
62. PCDH12 ENSDARG00000076594 381 0.893 0.893 - - - - - - - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
63. stab2 ENSDARG00000045748, ENSDARG00000111479 2952 0.892 0.892 - - - - - - - - stabilin 2 [Source:ZFIN;Acc:ZDB-GENE-041210-336]
64. cx44.2 ENSDARG00000034207, ENSDARG00000113651 431 0.891 - - - - - - 0.891 - - connexin 44.2 [Source:ZFIN;Acc:ZDB-GENE-010619-1]
65. ikbkb ENSDARG00000079123 498 0.89 - - - - - - 0.890 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
66. nudt1 ENSDARG00000030573 268 0.886 - - - - - - 0.886 - - nudix (nucleoside diphosphate linked moiety X)-type motif 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2757]
67. EP400 ENSDARG00000100965 45 0.884 - 0.884 - - - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
68. bag1 ENSDARG00000020895 1660 0.883 - - - - - - 0.883 - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
69. ccdc103 ENSDARG00000053455 81 0.883 - 0.883 - - - - - - - coiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
70. adra1d ENSDARG00000024101 387 0.881 0.881 - - - - - - - - adrenoceptor alpha 1D [Source:ZFIN;Acc:ZDB-GENE-090312-203]
71. ropn1l ENSDARG00000058370, ENSDARG00000114122 57 0.881 - 0.881 - - - - - - - rhophilin associated tail protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040724-235]
72. aak1 aak1 81 0.881 0.881 - - - - - - - -
73. cdh5 ENSDARG00000075549 2288 0.881 0.881 - - - - - - - - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
74. GEMIN6 ENSDARG00000105394 130 0.88 - - - - - - - 0.880 - gem (nuclear organelle) associated protein 6 [Source:ZFIN;Acc:ZDB-GENE-090218-1]
75. BX510934.1 ENSDARG00000087544 140 0.88 - 0.880 - - - - - - -
76. si:dkey-12l12.1 ENSDARG00000094422 168 0.88 - 0.880 - - - - - - - si:dkey-12l12.1 [Source:ZFIN;Acc:ZDB-GENE-091204-232]
77. CABZ01074899.1 CABZ01074899.1 89 0.88 - - - - - - 0.880 - -
78. si:ch211-250c4.3 si:ch211-250c4.3 677 0.88 - - - - - - 0.880 - -
79. PLXDC2 ENSDARG00000059950 220 0.879 - 0.879 - - - - - - - plexin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-140106-69]
80. adamts8a ENSDARG00000007709 75 0.879 0.879 - - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 8a [Source:ZFIN;Acc:ZDB-GENE-060526-202]
81. CU928070.1 CU928070.1 1152 0.878 - - - - - - 0.878 - -
82. trim25l ENSDARG00000020863 292 0.878 - - - - - - 0.878 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
83. cep72 ENSDARG00000105258 344 0.878 - 0.878 - - - - - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
84. ftr65 202 0.878 - 0.878 - - - - - - - finTRIM family, member 65
85. dnajc3 dnajc3 802 0.877 - - - - - - 0.877 - -
86. pomgnt1 ENSDARG00000052025, ENSDARG00000111516 983 0.877 - - - - - - 0.877 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:ZFIN;Acc:ZDB-GENE-070112-991]
87. TRIM35_11 TRIM35_11 23 0.874 - 0.874 - - - - - - -
88. cep97 ENSDARG00000102407 1154 0.872 - - - - - - - 0.872 - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
89. lrrc30 lrrc30 40 0.871 0.871 - - - - - - - -
90. vrtn ENSDARG00000061963, ENSDARG00000115943 42 0.87 - - - - - - - 0.870 - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
91. nck1b ENSDARG00000075369 1596 0.865 - - - - - - 0.865 - - NCK adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-090317-1]
92. npas3b npas3b 1446 0.862 - 0.862 - - - - - - -
93. ccdc173 ENSDARG00000077928 260 0.862 - 0.862 - - - - - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
94. s1pr5b ENSDARG00000052192 52 0.861 - - - - - - - 0.861 - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
95. znf692 ENSDARG00000078434 137 0.86 - - - - - 0.860 - - - zinc finger protein 692 [Source:ZFIN;Acc:ZDB-GENE-081104-484]
96. ssh2a ENSDARG00000088440 1149 0.859 - - - - - - 0.859 - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
97. vsg1 1870 0.859 0.859 - - - - - - - - vessel-specific 1
98. slx4ip ENSDARG00000039069 260 0.858 - - - - - - - 0.858 - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
99. exoc3l2a ENSDARG00000008414 227 0.858 0.858 - - - - - - - - exocyst complex component 3-like 2a [Source:ZFIN;Acc:ZDB-GENE-060526-343]
100. pigv ENSDARG00000101952 173 0.858 - - - - - - - 0.858 - phosphatidylinositol glycan anchor biosynthesis, class V [Source:ZFIN;Acc:ZDB-GENE-121116-1]

There are 1027 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA