Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc6a1b

Gene Name Gene ID Reads Annotation
slc6a1b ENSDARG00000039647 1301 solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]










Genes with expression patterns similar to slc6a1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc6a1b ENSDARG00000039647 1301 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
2. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 4.326 0.835 - - - - 0.987 0.951 0.844 0.709 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
3. BX957337.1 BX957337.1 1685 3.556 0.876 - - - - 0.923 0.817 0.940 -
4. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 3.518 0.753 - - - - 0.925 0.935 0.905 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
5. sox2 ENSDARG00000070913 2763 3.411 0.759 - - - - 0.973 0.938 0.741 - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
6. sypa ENSDARG00000042974, ENSDARG00000110528 3217 3.397 0.812 - - - - 0.898 0.839 0.848 - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
7. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 3.329 0.828 - - - - - 0.929 0.871 0.701 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
8. Sep-03 Sep-03 1124 3.314 0.854 - - - - 0.732 0.902 0.826 -
9. unc119b ENSDARG00000044362 1528 3.307 0.745 - - - - 0.890 0.941 - 0.731 unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
10. ZFHX3 ENSDARG00000103057 7759 3.227 0.710 0.919 - - - 0.755 0.843 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
11. mllt11 ENSDARG00000071026 2518 3.206 0.763 - - - - 0.803 0.902 - 0.738 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
12. dnajc5aa ENSDARG00000042948 2885 3.192 0.704 - - - - - 0.869 0.901 0.718 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
13. tuba1c ENSDARG00000055216 8384 3.18 0.805 - - - - 0.780 0.853 - 0.742 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
14. tox ENSDARG00000032317 9126 3.156 0.876 - - - - 0.721 0.845 - 0.714 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
15. gap43 ENSDARG00000099744 4114 3.092 0.703 - - - - 0.819 0.861 - 0.709 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
16. slc1a2b ENSDARG00000102453 3136 3.092 0.705 - - - - 0.729 0.766 0.892 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
17. stx1b ENSDARG00000000503 2724 3.047 0.727 - - - - 0.726 0.802 0.792 - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
18. tmem47 ENSDARG00000057322 4691 2.948 0.701 - - - - 0.712 0.720 0.815 - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
19. tnika ENSDARG00000056218 728 2.808 - - - - - 0.981 0.926 0.901 - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
20. zic3 ENSDARG00000071497 1448 2.806 - 0.978 - - - 0.972 0.856 - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
21. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.774 - - - - - 0.918 0.908 0.948 - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
22. PROCA1 ENSDARG00000069823 343 2.711 0.872 - - - - 0.936 0.903 - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
23. map7d2b ENSDARG00000045316 702 2.708 - 0.945 - - - - 0.855 0.908 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
24. gpr144 gpr144 479 2.69 0.822 - - - - 0.935 0.933 - -
25. bsk146 ENSDARG00000099069 274 2.678 - - - - - 0.948 0.821 0.909 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
26. ek1 ENSDARG00000020080 742 2.675 0.836 - - - - 0.971 0.868 - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
27. stmn1b ENSDARG00000033655 9491 2.671 0.832 - - - - 0.957 0.882 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
28. MANEAL ENSDARG00000056450 262 2.662 - - - - - 0.892 0.852 0.918 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
29. isl1 ENSDARG00000004023 981 2.657 0.866 - - - - 0.822 0.969 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
30. si:ch73-21g5.7 ENSDARG00000093156 9412 2.655 0.789 - - - - 0.962 0.904 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
31. fzd3a ENSDARG00000021664 1958 2.653 0.799 - - - - - 0.896 0.958 - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
32. plp1a ENSDARG00000103732 3544 2.639 0.798 - - - - 0.918 0.923 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
33. atp6ap1a ENSDARG00000041417 898 2.638 0.891 - - - - 0.993 0.754 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
34. CU856359.2 CU856359.2 182 2.633 0.734 - - - - 0.969 0.930 - -
35. cnrip1a ENSDARG00000091683 1491 2.631 0.772 - - - - 0.977 0.882 - - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
36. eno2 ENSDARG00000014287 2162 2.63 0.744 - - - - 0.936 0.950 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
37. mapk12b ENSDARG00000006409 2246 2.618 0.772 - - - - 0.969 0.877 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
38. hmp19 2554 2.618 0.798 - - - - 0.895 0.925 - - HMP19 protein
39. pcdh1gc5 ENSDARG00000104826 10052 2.606 0.809 - - - - 0.866 0.931 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
40. slc17a6b ENSDARG00000041150 823 2.605 - - - - - 0.863 0.820 0.922 - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
41. kcnn1a ENSDARG00000091306 95 2.602 0.734 - - - - 0.956 0.912 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
42. syt11a ENSDARG00000057913 1145 2.571 0.716 - - - - 0.922 0.933 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
43. MAP6 MAP6 643 2.567 0.757 - - - - 0.906 0.904 - -
44. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.555 0.768 - - - - 0.905 0.882 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
45. tubb5 ENSDARG00000037997 18691 2.555 0.784 - - - - - 0.862 0.909 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
46. layna ENSDARG00000035169 515 2.553 - 0.950 - - - 0.871 0.732 - - layilin a [Source:ZFIN;Acc:ZDB-GENE-070705-452]
47. rap2ip rap2ip 681 2.535 0.813 - - - - 0.799 0.923 - -
48. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.534 0.735 - - - - 0.854 0.945 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
49. fzd3b ENSDARG00000058692 627 2.533 - - - - - 0.759 0.875 0.899 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
50. spock2 ENSDARG00000075393 791 2.513 0.735 - - - - 0.933 0.845 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
51. dpysl4 ENSDARG00000103490 534 2.512 0.747 - - - - 0.933 0.832 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
52. SEMA7A ENSDARG00000078707 465 2.51 0.877 - - - - 0.828 0.805 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
53. trim2b ENSDARG00000076174 250 2.51 - 0.794 - - - 0.952 0.764 - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
54. vim ENSDARG00000010008 3551 2.508 0.829 - - - - 0.704 0.975 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
55. pcsk1nl ENSDARG00000076170 1232 2.505 0.700 - - - - 0.919 0.886 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
56. stxbp1a ENSDARG00000001994 5154 2.502 - - - - - 0.873 0.855 0.774 - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
57. nrarpb ENSDARG00000018958 6225 2.497 0.785 - - - - 0.790 0.922 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
58. aplp1 ENSDARG00000098368 2317 2.49 - - - - - 0.928 - 0.842 0.720 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
59. napg napg 645 2.48 - - - - - 0.812 0.751 0.917 -
60. gltscr1l gltscr1l 782 2.477 - - - - - 0.857 0.725 0.895 -
61. nrxn3b ENSDARG00000062693 192 2.475 0.821 - - - - 0.762 0.892 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
62. CT030046.1 CT030046.1 190 2.471 0.713 - - - - 0.981 0.777 - -
63. AP3B2 1874 2.468 - - - - - 0.834 0.736 0.898 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
64. ROBO3_1 ROBO3_1 468 2.467 0.728 - - - - 0.942 0.797 - -
65. si:dkey-100n10.2 101 2.465 0.770 - - - - 0.965 0.730 - - si:dkey-100n10.2
66. TNRC6C_2 TNRC6C_2 2444 2.462 - 0.816 - - - 0.745 0.901 - -
67. cadm3 ENSDARG00000057013 1545 2.452 - - - - - 0.818 - 0.900 0.734 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
68. EML6 250 2.444 - - - - - 0.928 0.813 - 0.703 echinoderm microtubule associated protein like 6
69. tuba2 ENSDARG00000045014 1490 2.434 - - - - - 0.969 0.743 - 0.722 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
70. myt1b ENSDARG00000102879 5411 2.43 0.725 - - - - 0.815 0.890 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
71. CABZ01038494.1 ENSDARG00000088258 908 2.422 - 0.816 - - - 0.702 - 0.904 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
72. atp6v0cb ENSDARG00000036577 3472 2.416 0.752 - - - - 0.764 0.900 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
73. hmgb3a ENSDARG00000056725 15668 2.414 - - - - - 0.717 0.821 0.876 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
74. gfap ENSDARG00000025301 5584 2.411 0.741 - - - - 0.814 0.856 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
75. kcnj11l ENSDARG00000031438 369 2.41 0.707 - - - - 0.943 0.760 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
76. tmem35 ENSDARG00000052567 5685 2.408 0.765 - - - - - 0.941 - 0.702 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
77. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.403 0.724 - - - - 0.888 0.791 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
78. rtn1b ENSDARG00000021143 1682 2.401 - - - - - 0.851 0.846 - 0.704 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
79. necap1 ENSDARG00000020798 612 2.396 0.735 - - - - 0.796 0.865 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
80. TRPC4_1 TRPC4_1 212 2.384 0.700 - - - - 0.945 0.739 - -
81. arhgef10lb ENSDARG00000074244, ENSDARG00000117194 907 2.37 - 0.746 - - - - 0.702 0.922 - Rho guanine nucleotide exchange factor (GEF) 10-like b [Source:ZFIN;Acc:ZDB-GENE-090313-222]
82. dpysl5a ENSDARG00000011141 1827 2.366 - - - - - 0.839 0.800 - 0.727 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
83. slc32a1 ENSDARG00000059775 1092 2.364 0.803 - - - - 0.803 0.758 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
84. gad2 ENSDARG00000015537 724 2.35 0.775 - - - - 0.736 0.839 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
85. her4.1 ENSDARG00000056732 1264 2.346 0.703 - - - - 0.749 0.894 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
86. atp1b2a ENSDARG00000099203 4010 2.34 0.744 - - - - - 0.879 - 0.717 ATPase Na+/K+ transporting subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-001127-2]
87. hnrnpub ENSDARG00000004735 16496 2.329 0.701 - - - - 0.765 0.863 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
88. map2 ENSDARG00000055052 6062 2.329 0.734 - - - - - 0.813 0.782 - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
89. snap25a ENSDARG00000020609 4537 2.324 0.753 - - - - 0.780 0.791 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
90. flrt1b ENSDARG00000075597 465 2.307 0.706 - - - - 0.792 0.809 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
91. tle2 5014 2.296 0.756 - - - - 0.736 0.804 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
92. MAP1A MAP1A 847 2.293 0.741 - - - - 0.826 0.726 - -
93. btg2 ENSDARG00000020298 6616 2.293 - - - - - 0.766 0.813 0.714 - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
94. celf3a ENSDARG00000034668 2432 2.285 - - - - - 0.774 0.776 - 0.735 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
95. ELOVL4 ELOVL4 3026 2.247 0.775 - - - - - 0.738 - 0.734
96. scn8aa ENSDARG00000005775 792 2.177 0.715 - - - - 0.708 0.754 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
97. lhx1a ENSDARG00000014018 958 2.16 0.729 - - - - - 0.704 - 0.727 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
98. si:ch73-335m24.5 ENSDARG00000036383 217 2.152 0.716 - - - - 0.734 0.702 - - si:ch73-335m24.5 [Source:ZFIN;Acc:ZDB-GENE-100922-39]
99. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.135 0.725 - - - - 0.702 0.708 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
100. her15.2 her15.2 1701 1.97 - - - - - 0.989 0.981 - -

There are 2830 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA