Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for slc6a1a

Gene Name Gene ID Reads Annotation
slc6a1a ENSDARG00000045944 260 solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]










Genes with expression patterns similar to slc6a1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc6a1a ENSDARG00000045944 260 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
2. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 3.161 - - - 0.864 0.745 - - 0.795 0.757 cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
3. celf4 ENSDARG00000070045 1537 3.107 0.808 - 0.740 - - - 0.774 0.785 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
4. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 2.53 - - - - 0.887 - - 0.874 0.769 moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
5. cxxc4 ENSDARG00000077817 197 2.493 - - - - - - 0.814 0.911 0.768 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
6. lingo2 lingo2 67 2.458 - - - - 0.765 - 0.923 - 0.770
7. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 2.457 0.716 0.910 - - - - 0.831 - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
8. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.419 0.863 - - - - - - 0.781 0.775 zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
9. pou4f2 ENSDARG00000069737 451 2.413 0.761 0.907 - - - - 0.745 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
10. foxg1a ENSDARG00000070769 928 2.384 - - 0.757 - 0.826 - - - 0.801 forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
11. tmem35 ENSDARG00000052567 5685 2.314 0.782 - - - - - 0.803 - 0.729 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
12. cdk5r2a ENSDARG00000071011 167 2.313 0.740 - - - - 0.783 0.790 - - cyclin-dependent kinase 5, regulatory subunit 2a (p39) [Source:ZFIN;Acc:ZDB-GENE-050417-22]
13. nbeaa ENSDARG00000070080 862 2.279 - - - 0.720 - - - 0.822 0.737 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
14. gas7a ENSDARG00000074443, ENSDARG00000111294 250 2.27 0.749 - - - - - - 0.766 0.755 growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
15. CABZ01086220.1 CABZ01086220.1 723 2.269 - - - - - 0.734 0.828 - 0.707
16. zgc:158654 19 2.257 - - - - 0.748 - 0.771 - 0.738 zgc:158654, transcript variant X1
17. dlg4 88 2.255 - - - - - 0.772 0.738 0.745 - discs large MAGUK scaffold protein 4, transcript variant X5
18. elovl4a ENSDARG00000006773 412 2.235 - 0.788 - - - - 0.719 - 0.728 ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
19. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.23 - - - 0.721 0.809 0.700 - - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
20. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 2.219 - - - - - 0.721 0.768 0.730 - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
21. APBB3 ENSDARG00000053771 654 2.207 0.772 - 0.704 - - - 0.731 - - amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
22. prdm1b ENSDARG00000098925 440 2.182 - 0.711 - - 0.746 - - - 0.725 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
23. CABZ01029738.1 CABZ01029738.1 327 2.17 - - - - - 0.721 0.740 0.709 -
24. dlgap3 ENSDARG00000055459 85 1.759 - 0.926 - - - - 0.833 - - discs, large (Drosophila) homolog-associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-060503-413]
25. cbln2b ENSDARG00000077151 38 1.752 0.801 0.951 - - - - - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
26. sst1.1 ENSDARG00000040799 677 1.749 - - - - - 0.846 0.903 - - somatostatin 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4743]
27. SNORA7 SNORA7 100 1.719 - 0.951 - - - - 0.768 - -
28. si:dkey-2j6.2 si:dkey-2j6.2 5 1.717 - 0.951 - - 0.766 - - - -
29. U3_1 U3_1 61 1.711 - 0.951 - - - - 0.760 - -
30. gap43 ENSDARG00000099744 4114 1.69 0.849 - - - - - - - 0.841 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
31. cacna2d3 ENSDARG00000078760 211 1.682 0.883 - - - - - 0.799 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
32. kcnh2 kcnh2 76 1.676 - 0.951 - - - - 0.725 - -
33. Metazoa_SRP_24 Metazoa_SRP_24 4 1.673 - 0.951 - - - - - 0.722 -
34. gcfc2 ENSDARG00000079020 479 1.663 - 0.890 - - - - 0.773 - - GC-rich sequence DNA-binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-19]
35. lhx5 ENSDARG00000057936 785 1.653 0.861 - - 0.792 - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
36. TENM2_1 ENSDARG00000037122 67 1.651 - 0.951 - - 0.700 - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
37. SH2D4B SH2D4B 4 1.647 - - - 0.760 0.887 - - - -
38. zgc:174862 ENSDARG00000077571 201 1.645 0.738 0.907 - - - - - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
39. ptprnb ENSDARG00000077047 2743 1.643 0.751 - - - - - 0.892 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
40. mdkb ENSDARG00000020708 5393 1.634 0.894 - - - - - 0.740 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
41. zgc:174224 ENSDARG00000093875 4 1.634 - 0.799 - - - - 0.835 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
42. egf ENSDARG00000052739, ENSDARG00000114581 141 1.631 - 0.910 - - - - 0.721 - - epidermal growth factor [Source:ZFIN;Acc:ZDB-GENE-070922-1]
43. ENTHD1 ENTHD1 235 1.629 - - - - - 0.871 0.758 - -
44. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1.629 - 0.907 - - - - - 0.722 - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
45. ZNF337_7 ZNF337_7 198 1.627 - 0.882 - - - - 0.745 - -
46. arhgap22 ENSDARG00000021255 117 1.625 - - - - - 0.873 0.752 - - Rho GTPase activating protein 22 [Source:ZFIN;Acc:ZDB-GENE-090313-87]
47. DLGAP2 DLGAP2 36 1.624 0.750 - - - - - 0.874 - -
48. WDR63 ENSDARG00000105093 13 1.623 - 0.788 - - - - 0.835 - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
49. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.623 - - - - - - - 0.823 0.800 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
50. atoh7 ENSDARG00000069552 254 1.622 - - - - - - 0.835 - 0.787 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
51. prrt1 ENSDARG00000062208 368 1.622 0.819 - - - - - 0.803 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
52. si:dkeyp-27e10.3 ENSDARG00000063008 369 1.621 0.718 0.903 - - - - - - - si:dkeyp-27e10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-96]
53. MAP6 MAP6 643 1.621 0.808 - - - - - 0.813 - -
54. EML6 250 1.62 - - - - - - 0.890 - 0.730 echinoderm microtubule associated protein like 6
55. nkx6.1 ENSDARG00000022569 3779 1.62 - - - - - 0.824 0.796 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
56. atp2b3b ENSDARG00000023445 1424 1.619 0.814 - - - - - 0.805 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
57. si:dkey-253d23.8 ENSDARG00000094427 26 1.619 - 0.908 - - - - - 0.711 - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
58. EPHB6 ENSDARG00000057729 223 1.618 - 0.891 - 0.727 - - - - - eph receptor B6 [Source:ZFIN;Acc:ZDB-GENE-100922-51]
59. lhx4 ENSDARG00000039458 328 1.617 - - - - - 0.805 0.812 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
60. six3b ENSDARG00000054879 2416 1.613 - - - - - - - 0.823 0.790 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
61. TRPC4_1 TRPC4_1 212 1.61 0.775 - - - - - 0.835 - -
62. prdm8 ENSDARG00000025017 370 1.607 - - - - - 0.761 0.846 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
63. nkx2.1b nkx2.1b 125 1.606 - - - 0.724 - - - 0.882 -
64. olig2 ENSDARG00000040946 1405 1.604 - - - - - 0.756 0.848 - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
65. gad2 ENSDARG00000015537 724 1.604 - - - - - - 0.801 0.803 - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
66. C1QL4 C1QL4 93 1.602 0.833 - - - - - - 0.769 -
67. chek2 ENSDARG00000025820, ENSDARG00000115597 77 1.599 0.801 0.798 - - - - - - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
68. SYT2 ENSDARG00000014169 265 1.598 0.834 - - - - - 0.764 - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
69. chrna2a ENSDARG00000006602 163 1.596 - - - - - 0.721 0.875 - - cholinergic receptor, nicotinic, alpha 2a (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-2]
70. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.595 - - - - - - 0.841 - 0.754 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
71. SLC2A13 SLC2A13 74 1.594 - - - - - - 0.875 0.719 -
72. C9H2orf69 C9H2orf69 148 1.593 0.768 0.825 - - - - - - -
73. CT030046.1 CT030046.1 190 1.59 0.808 - - - - - 0.782 - -
74. pcdh2ac ENSDARG00000099783 325 1.585 - 0.750 - - - - - 0.835 - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
75. ATP6AP1L ATP6AP1L 164 1.585 0.773 - - - - - 0.812 - -
76. BX936443.2 BX936443.2 28 1.583 - - - - 0.748 - 0.835 - -
77. fezf1 ENSDARG00000010270 379 1.583 - - - 0.764 0.819 - - - - FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
78. CABZ01021538.1 CABZ01021538.1 67 1.582 - - - - 0.748 - 0.834 - -
79. si:dkey-271j15.3 ENSDARG00000091627 88 1.581 - 0.746 - - - - 0.835 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
80. pou4f1 ENSDARG00000005559 821 1.581 0.870 - - - - - 0.711 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
81. cadm3 ENSDARG00000057013 1545 1.581 0.805 - - - - - - - 0.776 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
82. rap2ip rap2ip 681 1.578 - - - - - - 0.806 - 0.772
83. adcyap1b ENSDARG00000027740 1539 1.578 0.869 - - - - - 0.709 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
84. nmnat2 ENSDARG00000004580 370 1.576 0.805 - - - - - 0.771 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
85. GADD45G GADD45G 382 1.576 0.784 - - - - - 0.792 - -
86. fezf2 ENSDARG00000070677 224 1.576 - - 0.763 - 0.813 - - - - FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
87. lgi1a ENSDARG00000020493 1218 1.574 0.751 - - - - - 0.823 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
88. ascl1a ENSDARG00000038386 1290 1.572 - - - - - - 0.816 - 0.756 achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
89. ptf1a ENSDARG00000014479 349 1.57 - - - - - - 0.835 - 0.735 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
90. adam23a ENSDARG00000062323 580 1.569 0.788 - - - - - 0.781 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
91. espn ENSDARG00000076414 343 1.568 - - - - - 0.810 0.758 - - espin [Source:ZFIN;Acc:ZDB-GENE-081105-173]
92. nrxn3b ENSDARG00000062693 192 1.566 0.714 - - - - - 0.852 - - neurexin 3b [Source:ZFIN;Acc:ZDB-GENE-070206-10]
93. slc17a6a ENSDARG00000001127 337 1.565 0.850 - - - - - - - 0.715 solute carrier family 17 (vesicular glutamate transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-050105-4]
94. TUBB8P7_1 TUBB8P7_1 2722 1.561 0.777 - - - - - 0.784 - -
95. otpa ENSDARG00000014201 2290 1.556 0.786 - - - 0.770 - - - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
96. nrxn2a ENSDARG00000061454 291 1.556 0.818 - - - - - - - 0.738 neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
97. rx1 ENSDARG00000071684 247 1.555 - - - - - - - 0.769 0.786 retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
98. TUBB2A TUBB2A 142 1.549 0.755 - - - - - 0.794 - -
99. atpv0e2 ENSDARG00000059057 585 1.548 0.741 - - - - - 0.807 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
100. SSX2IP SSX2IP 316 1.548 - - - - - 0.742 0.806 - -

There are 1587 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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