Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc6a13

Gene Name Gene ID Reads Annotation
slc6a13 369 solute carrier family 6 (neurotransmitter transporter), member 13, transcript variant X1










Genes with expression patterns similar to slc6a13

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc6a13 369 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 6 (neurotransmitter transporter), member 13, transcript variant X1
2. sema6d ENSDARG00000002748 133 2.506 - 0.831 0.768 - - 0.907 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
3. CABZ01072083.1 CABZ01072083.1 56 1.819 - - - - - 0.922 0.897 - -
4. AC024175.9 AC024175.9 56 1.792 - 0.863 - - - 0.929 - - -
5. clk4b ENSDARG00000005908 915 1.763 - 0.806 - - - 0.957 - - - CDC-like kinase 4b [Source:ZFIN;Acc:ZDB-GENE-050227-19]
6. slco2a1 ENSDARG00000061896 58 1.749 - 0.818 - - - 0.931 - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
7. TBC1D17 ENSDARG00000005927 163 1.749 - 0.815 - - - - 0.934 - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
8. grp ENSDARG00000043074 747 1.73 - 0.810 - - - 0.920 - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
9. s100z ENSDARG00000038729 442 1.728 - 0.811 - - - 0.917 - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
10. SRR SRR 544 1.719 - - - - - - 0.835 0.884 -
11. cx28.8 ENSDARG00000071042 62 1.718 - 0.796 - - - - 0.922 - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
12. trpc5b ENSDARG00000060837, ENSDARG00000114021 15 1.71 - 0.825 - - - - 0.885 - - transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]
13. arsg ENSDARG00000101715 57 1.706 - 0.887 - - - - 0.819 - - arylsulfatase G [Source:ZFIN;Acc:ZDB-GENE-060503-154]
14. zgc:114123 ENSDARG00000044956 9 1.705 - 0.808 - - - - 0.897 - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
15. si:dkey-125i10.3 ENSDARG00000094760 908 1.703 0.797 - - - - 0.906 - - - si:dkey-125i10.3 [Source:ZFIN;Acc:ZDB-GENE-060526-198]
16. eif4e2rs1 ENSDARG00000015835 589 1.703 - 0.848 - - - 0.855 - - - eukaryotic translation initiation factor 4E family member 2 related sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1728]
17. IPO11 ENSDARG00000054224 616 1.7 - 0.873 - - - - - 0.827 - importin 11 [Source:ZFIN;Acc:ZDB-GENE-040711-1]
18. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.699 0.812 0.887 - - - - - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
19. sdccag3 239 1.692 - - - - - 0.780 0.912 - - serologically defined colon cancer antigen 3, transcript variant X2
20. CCDC64B CCDC64B 337 1.689 - - - - - 0.921 - 0.768 -
21. stra13 598 1.688 - 0.808 - - - 0.880 - - - stimulated by retinoic acid 13 homolog (mouse)
22. tpk1 ENSDARG00000038040, ENSDARG00000114161 334 1.679 - 0.767 - - - 0.912 - - - thiamin pyrophosphokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-176]
23. ankrd39 ENSDARG00000041350 73 1.668 - 0.745 - - - 0.923 - - - ankyrin repeat domain 39 [Source:ZFIN;Acc:ZDB-GENE-081104-153]
24. tmem39b ENSDARG00000018956 590 1.664 - 0.809 - - - 0.855 - - - transmembrane protein 39B [Source:ZFIN;Acc:ZDB-GENE-030131-6042]
25. slc27a6 ENSDARG00000046053 57 1.662 - 0.810 - - - - 0.852 - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
26. CABZ01049802.1 CABZ01049802.1 195 1.656 - 0.719 - - - 0.937 - - -
27. klhl11 ENSDARG00000045130 800 1.649 - 0.762 - - - 0.887 - - - kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
28. dao.2 ENSDARG00000035603 8 1.645 - - 0.748 - - - 0.897 - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
29. cicb ENSDARG00000055502 1356 1.628 0.846 - - - - 0.782 - - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
30. GSK3B ENSDARG00000017803 275 1.613 0.873 0.740 - - - - - - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
31. NBEAL1 ENSDARG00000099547 1112 1.613 - 0.706 - - - 0.907 - - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
32. pdip5 pdip5 2643 1.611 - - - - - 0.735 - 0.876 -
33. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 1.607 - - - - - 0.900 0.707 - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
34. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.605 - 0.714 - - - 0.891 - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
35. tm7sf3 ENSDARG00000093658 754 1.603 - - - - - 0.845 - 0.758 - transmembrane 7 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1770]
36. GRB7 ENSDARG00000042726 100 1.601 - - - - - 0.861 0.740 - - growth factor receptor bound protein 7 [Source:ZFIN;Acc:ZDB-GENE-091118-23]
37. zdhhc9 ENSDARG00000060515 981 1.595 - - - - - 0.859 0.736 - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
38. spra ENSDARG00000004406 268 1.591 0.705 - - - - - - 0.886 - sepiapterin reductase a [Source:ZFIN;Acc:ZDB-GENE-050522-412]
39. gid8b ENSDARG00000037589 2121 1.579 0.702 - - - - 0.877 - - - GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
40. crygn2 ENSDARG00000030411 2551 1.577 - 0.821 - - - - 0.756 - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
41. srek1ip1 ENSDARG00000043728 985 1.577 - 0.730 - - - 0.847 - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
42. zgc:66014 817 1.573 0.806 0.767 - - - - - - - zgc:66014, transcript variant X6
43. sbds ENSDARG00000027803 846 1.558 - 0.700 - - - 0.858 - - - SBDS, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-040426-1116]
44. zgc:64106 ENSDARG00000011371 673 1.547 - - - - - 0.773 0.774 - - zgc:64106 [Source:ZFIN;Acc:ZDB-GENE-040426-1370]
45. CR762436.4 CR762436.4 267 1.523 - 0.707 - - - - 0.816 - -
46. cables2b ENSDARG00000017154 131 1.497 0.736 0.761 - - - - - - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
47. CR931813.1 ENSDARG00000103293 84 1.472 - 0.749 - - - - 0.723 - -
48. st14a ENSDARG00000061173 3800 1.451 - - - - - 0.716 - 0.735 - suppression of tumorigenicity 14 (colon carcinoma) a [Source:ZFIN;Acc:ZDB-GENE-030131-6496]
49. acbd6 ENSDARG00000039456 2355 1.421 - 0.718 - - - - - 0.703 - acyl-CoA binding domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2810]
50. taf8 ENSDARG00000026806, ENSDARG00000114197 1427 1.409 0.708 - - - - 0.701 - - - TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040426-1013]
51. pef1 ENSDARG00000023989 3013 0.972 - - - - - 0.972 - - - penta-EF-hand domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-259]
52. C2CD2 ENSDARG00000105000 2573 0.971 - - - - - 0.971 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
53. brox ENSDARG00000013659 1334 0.97 - - - - - 0.970 - - - BRO1 domain and CAAX motif containing [Source:ZFIN;Acc:ZDB-GENE-041114-137]
54. CR847496.2 ENSDARG00000116070 802 0.964 - - - - - 0.964 - - - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
55. litaf ENSDARG00000103483 217 0.959 - - - - - 0.959 - - - lipopolysaccharide-induced TNF factor [Source:ZFIN;Acc:ZDB-GENE-040704-23]
56. mir203b 1077 0.958 - - - - - 0.958 - - - microRNA 203b
57. epn2 ENSDARG00000008377 5458 0.958 - - - - - 0.958 - - - epsin 2 [Source:ZFIN;Acc:ZDB-GENE-071212-1]
58. clk2b ENSDARG00000059870 525 0.957 - - - - - 0.957 - - - CDC-like kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-1126]
59. becn1 ENSDARG00000079128 581 0.956 - - - - - 0.956 - - - beclin 1, autophagy related [Source:ZFIN;Acc:ZDB-GENE-040426-1666]
60. pip5k1aa ENSDARG00000100396 1644 0.954 - - - - - 0.954 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
61. PCSK6 ENSDARG00000104574 710 0.954 - - - - - 0.954 - - - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
62. eml2 ENSDARG00000008808 706 0.953 - - - - - 0.953 - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
63. adam15 ENSDARG00000089213 359 0.951 - - - - - 0.951 - - - ADAM metallopeptidase domain 15 [Source:ZFIN;Acc:ZDB-GENE-070809-4]
64. tnfrsf1b ENSDARG00000070165 467 0.95 - 0.950 - - - - - - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
65. exoc3l1 ENSDARG00000051899, ENSDARG00000113508, ENSDARG00000114148 195 0.949 - - - - - 0.949 - - - exocyst complex component 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-36]
66. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.948 - - - - - 0.948 - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
67. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 0.948 - - - - - 0.948 - - - abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
68. ARSJ ENSDARG00000077590 684 0.948 - - - - - 0.948 - - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
69. hig1 hig1 2493 0.948 - - - - - 0.948 - - -
70. mctp2a ENSDARG00000001414 307 0.947 - - - - - 0.947 - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
71. maff ENSDARG00000028957, ENSDARG00000111050 1809 0.946 - - - - - 0.946 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F [Source:ZFIN;Acc:ZDB-GENE-040426-1280]
72. afap1 ENSDARG00000055284 730 0.945 - - - - - 0.945 - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
73. C24H8orf44 C24H8orf44 405 0.944 - - - - - 0.944 - - -
74. CEP85 ENSDARG00000060215 537 0.943 - - - - - 0.943 - - - centrosomal protein 85 [Source:ZFIN;Acc:ZDB-GENE-030131-1998]
75. tmem154 ENSDARG00000074776 454 0.943 - - - - - 0.943 - - - transmembrane protein 154 [Source:ZFIN;Acc:ZDB-GENE-030131-2401]
76. pip5k1ab ENSDARG00000024642 1988 0.942 - - - - - 0.942 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
77. si:dkeyp-110g5.4 ENSDARG00000092482 249 0.942 - - - - - 0.942 - - - si:dkeyp-110g5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-452]
78. GDPD2 ENSDARG00000073870 229 0.942 - - - - - 0.942 - - - glycerophosphodiester phosphodiesterase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081107-62]
79. arhgap29b ENSDARG00000017748 812 0.942 - - - - - 0.942 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
80. mesdc2 776 0.942 - - - - - 0.942 - - - mesoderm development candidate 2, transcript variant X2
81. FP017169.3 FP017169.3 216 0.942 - - - - - 0.942 - - -
82. fitm2 ENSDARG00000034568, ENSDARG00000112035 1717 0.941 - - - - - 0.941 - - - fat storage-inducing transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-050508-5]
83. actr2a ENSDARG00000052438 5838 0.941 - - - - - 0.941 - - - ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
84. smurf2 ENSDARG00000038067 2057 0.941 - - - - - 0.941 - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
85. SH2D2A SH2D2A 31 0.94 - - - - - 0.940 - - -
86. cmasb 499 0.94 - - - - - 0.940 - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
87. zgc:158614 zgc:158614 312 0.94 - - - - - 0.940 - - -
88. si:dkey-82i20.2 ENSDARG00000095126, ENSDARG00000100509 155 0.94 - - - - - 0.940 - - - si:dkey-82i20.2 [Source:ZFIN;Acc:ZDB-GENE-110914-74]
89. dre-mir-429b ENSDARG00000082968 212 0.939 - - - - - 0.939 - - - dre-mir-429b [Source:miRBase;Acc:MI0010836]
90. CABZ01057013.1 CABZ01057013.1 1308 0.939 - - - - - 0.939 - - -
91. BX000999.4 BX000999.4 206 0.938 - - - - - 0.938 - - -
92. dbnla ENSDARG00000008170 2129 0.937 - - - - - 0.937 - - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
93. selj 884 0.937 - - - - - 0.937 - - - selenoprotein J
94. CDK5RAP2 CDK5RAP2 636 0.936 - - - - - 0.936 - - -
95. TESK1_1 TESK1_1 276 0.936 - - - - - 0.936 - - -
96. BX649282.1 ENSDARG00000105704 347 0.935 - - - - - 0.935 - - -
97. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 0.935 - - - - - 0.935 - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
98. elp3 ENSDARG00000042005 936 0.935 - - - - - 0.935 - - - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
99. tom1 ENSDARG00000104581 1457 0.934 - - - - - 0.934 - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
100. tfam ENSDARG00000063145 4524 0.934 - - - - - 0.934 - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]

There are 1408 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA