Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc6a11a

Gene Name Gene ID Reads Annotation
slc6a11a ENSDARG00000074002 189 solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]










Genes with expression patterns similar to slc6a11a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc6a11a ENSDARG00000074002 189 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
2. mst1ra ENSDARG00000060235 78 2.594 0.915 0.780 - - - - 0.899 - - macrophage stimulating 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-071218-2]
3. HEATR2_1 HEATR2_1 166 2.48 - 0.908 - - - 0.824 - - 0.748
4. si:ch211-71k24.5 si:ch211-71k24.5 9 2 - 1.000 - - - 1.000 - - -
5. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1.958 - 0.958 - - - 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
6. si:ch211-207e7.1 si:ch211-207e7.1 33 1.942 - - - - - 1.000 - - 0.942
7. vtg3 ENSDARG00000016448 8 1.886 - 1.000 - - 0.886 - - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
8. PEG3_22 PEG3_22 33 1.885 - 0.894 - - - - 0.991 - -
9. si:ch211-76l23.5 si:ch211-76l23.5 26 1.813 - - - - - 1.000 - - 0.813
10. vasna ENSDARG00000099266, ENSDARG00000111629 488 1.811 - 0.829 - - - - - 0.982 - vasorin a [Source:ZFIN;Acc:ZDB-GENE-050522-43]
11. zgc:158464 ENSDARG00000100342 18 1.799 - - - - 0.878 - 0.921 - - zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]
12. si:dkey-204f11.64 ENSDARG00000094695 586 1.795 - - - - - - - 0.997 0.798 si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
13. camsap1a ENSDARG00000019208 137 1.783 - 0.979 - - - 0.804 - - - calmodulin regulated spectrin-associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-060518-4]
14. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 1.779 - 0.874 - - - - 0.905 - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
15. anxa5a ENSDARG00000026406 19 1.764 - 1.000 - - - 0.764 - - - annexin A5a [Source:ZFIN;Acc:ZDB-GENE-080220-29]
16. osbp2 ENSDARG00000053487 42 1.758 - 1.000 - - - - - - 0.758 oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
17. THSD7B THSD7B 15 1.755 - - - - 0.891 0.864 - - -
18. zgc:92380 ENSDARG00000041339 1867 1.754 - - - - - - - 0.934 0.820 zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
19. MUC5AC_2 MUC5AC_2 5 1.75 0.750 - - - - 1.000 - - -
20. CR339051.1 CR339051.1 9 1.75 0.750 - - - - 1.000 - - -
21. agtr1b ENSDARG00000045443 232 1.738 - - - - - - - 0.989 0.749 angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
22. kcng4 kcng4 37 1.736 - 1.000 0.736 - - - - - -
23. BX649554.3_1 BX649554.3_1 1071 1.732 - - - - - - - 0.932 0.800
24. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.731 - 0.813 - - - - 0.918 - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
25. hsd17b4 ENSDARG00000101239 301 1.73 - - - - - - 0.731 0.999 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
26. CNTLN ENSDARG00000033345 128 1.73 - 0.900 - - - 0.830 - - - centlein, centrosomal protein [Source:ZFIN;Acc:ZDB-GENE-090313-409]
27. ttll9 ENSDARG00000062806 89 1.726 0.960 - - - - 0.766 - - - tubulin tyrosine ligase-like family, member 9 [Source:ZFIN;Acc:ZDB-GENE-030131-1582]
28. srebf2 ENSDARG00000063438 1982 1.712 - 0.728 - - - - - 0.984 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
29. chfr ENSDARG00000075347 664 1.71 - 0.878 - - - - 0.832 - - checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030131-3522]
30. cog6 ENSDARG00000103149 39 1.708 - 0.978 0.730 - - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
31. CU929225.1 CU929225.1 104 1.7 - 0.923 - - - - - - 0.777
32. kin ENSDARG00000045515 109 1.696 - 0.832 - - - 0.864 - - - Kin17 DNA and RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3689]
33. si:ch73-234b20.4 112 1.693 - - - - - 0.722 0.971 - - si:ch73-234b20.4, transcript variant X1
34. st6gal2 st6gal2 1570 1.69 - - - - - - 0.715 0.975 -
35. ccdc106 ccdc106 101 1.688 - 0.878 - - - - - - 0.810
36. SLITRK5 SLITRK5 122 1.676 - 0.920 - - - 0.756 - - -
37. ZNF385D ENSDARG00000086162 202 1.665 - 0.934 - - - - - - 0.731 zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
38. CCAR2 ENSDARG00000038302 363 1.66 - 0.747 - - - - 0.913 - - cell cycle and apoptosis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-091204-207]
39. C5H9orf171 C5H9orf171 34 1.619 - - 0.806 - - - - - 0.813
40. rabgef1l ENSDARG00000015968 38 1.614 - 0.766 - - - - 0.848 - - RAB guanine nucleotide exchange factor (GEF) 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-813]
41. si:rp71-1i20.2 ENSDARG00000043198 113 1.613 - - - - - - 0.825 - 0.788 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
42. slc1a7a ENSDARG00000034940 149 1.602 - 0.723 - - - - 0.879 - - solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
43. KCNJ15 ENSDARG00000058988 18 1.595 0.750 - - - - - 0.845 - - potassium voltage-gated channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]
44. xkr8.3 ENSDARG00000039996 457 1.58 - 0.767 - - - - - - 0.813 XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-041010-107]
45. CDC42EP1 CDC42EP1 50 1.572 0.750 - - - - 0.822 - - -
46. FGFBP3 FGFBP3 993 1.569 - - - - - 0.706 - 0.863 -
47. zak ENSDARG00000006978, ENSDARG00000044615 80 1.567 0.750 0.817 - - - - - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
48. zgc:165481 ENSDARG00000060092 95 1.559 - - - - - 0.749 - - 0.810 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
49. si:dkey-238o14.6 si:dkey-238o14.6 42 1.559 - - 0.754 - - - - - 0.805
50. si:ch73-257c13.2 ENSDARG00000074305 197 1.554 - - - - - - 0.783 - 0.771 si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
51. rtn4rl2b ENSDARG00000037495 11 1.549 0.750 - - - 0.799 - - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
52. itga1 ENSDARG00000074316, ENSDARG00000116602 610 1.538 - 0.818 - - - - 0.720 - - integrin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-091118-115]
53. usp45 ENSDARG00000075013 227 1.537 - - 0.720 - - - 0.817 - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
54. SORCS2 ENSDARG00000077465 185 1.506 - - - - - - 0.736 - 0.770 sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
55. Mar-09 Mar-09 126 1.495 - - - - - 0.768 - - 0.727
56. lrrc47 ENSDARG00000053138 417 1.493 - 0.702 - - - - 0.791 - - leucine rich repeat containing 47 [Source:ZFIN;Acc:ZDB-GENE-060503-289]
57. hsd17b7 ENSDARG00000088140 185 1.491 0.749 - - - - - - - 0.742 hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
58. BX324131.3 BX324131.3 278 1.484 0.712 - - - - 0.772 - - -
59. dnaaf1 ENSDARG00000012030 58 1.459 0.710 - - - - 0.749 - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
60. eif2ak2 ENSDARG00000068729 184 1.449 - 0.721 - - - - 0.728 - - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
61. THEG ENSDARG00000078644 121 1.429 - 0.704 - - - - - - 0.725 theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
62. fnbp1l ENSDARG00000020131 79 1.426 0.708 0.718 - - - - - - - formin binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040801-155]
63. CR318593.1 CR318593.1 290 1.42 - - - - - - 0.705 - 0.715
64. cabp4 ENSDARG00000008866 4 1 - 1.000 - - - - - - - calcium binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-291]
65. ADAMTS15 ADAMTS15 73 1 - - - - - 1.000 - - -
66. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
67. cul4a ENSDARG00000096578 14 1 - - - - - 1.000 - - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
68. CU929159.1 CU929159.1 0 1 - - - - - 1.000 - - -
69. si:ch73-223d24.4 si:ch73-223d24.4 5 1 - 1.000 - - - - - - -
70. si:ch73-138e16.1 si:ch73-138e16.1 5 1 - 1.000 - - - - - - -
71. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - - - - - 1.000 - - -
72. CIT_1 CIT_1 6 1 - - - - - 1.000 - - -
73. C3H19orf66 C3H19orf66 20 1 - - - - - 1.000 - - -
74. zgc:112146 ENSDARG00000104829 34 1 - - - - - 1.000 - - - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
75. RNF14_3 RNF14_3 15 1 - - - - - 1.000 - - -
76. si:dkeyp-82b4.2 ENSDARG00000112648 14 1 - 1.000 - - - - - - - si:dkeyp-82b4.2 [Source:ZFIN;Acc:ZDB-GENE-060503-561]
77. DMXL2 ENSDARG00000091293 3 1 - - - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
78. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1 - - - - - 1.000 - - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
79. zgc:172051 ENSDARG00000086569 12 1 - - - - - - 1.000 - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
80. ifng1-2 3 1 - - - - - - 1.000 - - interferon, gamma 1-2
81. FAM13C FAM13C 1 1 - - - - - 1.000 - - -
82. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
83. C24H8orf34 C24H8orf34 1 1 - - - - - 1.000 - - -
84. CR792453.3 ENSDARG00000110328 5 1 - - - - - 1.000 - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
85. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - 1.000 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
86. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1 - - - - - 1.000 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
87. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
88. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
89. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
90. LRRC71 LRRC71 11 1 - - - - - 1.000 - - -
91. FP236810.3 FP236810.3 1 1 - - - - - 1.000 - - -
92. si:ch211-260g14.9 si:ch211-260g14.9 2 1 - - - - - 1.000 - - -
93. AL844567.1_1 AL844567.1_1 34 1 - - - - - 1.000 - - -
94. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
95. bbs5 ENSDARG00000039827 211 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
96. serpine3 ENSDARG00000057108 49 1 - - - - - 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
97. aptx ENSDARG00000027143 87 1 - - - - - 1.000 - - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
98. GABRB1 ENSDARG00000076127 16 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 1 [Source:ZFIN;Acc:ZDB-GENE-090313-230]
99. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
100. ZP2_2 ZP2_2 28 1 - - - - - 1.000 - - -

There are 1689 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA